EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000204532 (Gene tree)
Gene ID: 649137
Gene Symbol: ZSCAN5C
Alias: ZNF495C|ZSCAN5CP
Full Name: zinc finger and SCAN domain containing 5C
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 7,154 bases
Position: chr19:56,202,301-56,209,454
Accession: 34294
RBP type: canonical RBP
Summary: ZSCAN5C (Zinc Finger And SCAN Domain Containing 5C) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity, RNA polymerase II-specific. An important paralog of this gene is ZSCAN5A.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000365443	zf-C2H2	PF00096.26	9.5e-21	1	3
ENSP00000365443	zf-C2H2	PF00096.26	9.5e-21	2	3
ENSP00000365443	zf-C2H2	PF00096.26	9.5e-21	3	3
ENSP00000435234	zf-C2H2	PF00096.26	9.5e-21	1	3
ENSP00000435234	zf-C2H2	PF00096.26	9.5e-21	2	3
ENSP00000435234	zf-C2H2	PF00096.26	9.5e-21	3	3
ENSP00000365443	zf-met	PF12874.7	3.7e-07	1	2
ENSP00000365443	zf-met	PF12874.7	3.7e-07	2	2
ENSP00000435234	zf-met	PF12874.7	3.7e-07	1	2
ENSP00000435234	zf-met	PF12874.7	3.7e-07	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000376267	ZSCAN5C-201	1491	-	ENSP00000365443	496 (aa)	-	A6NGD5
ENST00000534327	ZSCAN5C-202	1892	-	ENSP00000435234	496 (aa)	-	A6NGD5

Gene Model

Click here to download ENSG00000204532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000204532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000204532	ZSCAN5C	100	67.200	ENSANAG00000036793	-	99	67.200	Aotus_nancymaae
ENSG00000204532	ZSCAN5C	100	77.419	ENSANAG00000030428	-	88	77.419	Aotus_nancymaae
ENSG00000204532	ZSCAN5C	99	73.737	ENSCJAG00000044165	-	99	73.737	Callithrix_jacchus
ENSG00000204532	ZSCAN5C	100	77.823	ENSCJAG00000038440	-	100	77.823	Callithrix_jacchus
ENSG00000204532	ZSCAN5C	100	79.032	ENSCCAG00000036576	-	100	79.032	Cebus_capucinus
ENSG00000204532	ZSCAN5C	99	76.364	ENSCCAG00000021033	-	99	76.364	Cebus_capucinus
ENSG00000204532	ZSCAN5C	100	76.815	ENSCCAG00000028957	-	100	76.815	Cebus_capucinus
ENSG00000204532	ZSCAN5C	99	82.020	ENSCATG00000039708	ZSCAN5A	99	82.020	Cercocebus_atys
ENSG00000204532	ZSCAN5C	100	82.093	ENSCATG00000040802	ZSCAN5C	100	82.093	Cercocebus_atys
ENSG00000204532	ZSCAN5C	100	84.073	ENSCSAG00000001677	ZSCAN5C	100	84.073	Chlorocebus_sabaeus
ENSG00000204532	ZSCAN5C	90	79.911	ENSCSAG00000001674	-	90	79.911	Chlorocebus_sabaeus
ENSG00000204532	ZSCAN5C	100	81.250	ENSCSAG00000001675	ZSCAN5A	100	81.250	Chlorocebus_sabaeus
ENSG00000204532	ZSCAN5C	100	82.863	ENSCANG00000022972	ZSCAN5A	100	82.863	Colobus_angolensis_palliatus
ENSG00000204532	ZSCAN5C	100	89.718	ENSCANG00000004772	ZSCAN5C	100	89.718	Colobus_angolensis_palliatus
ENSG00000204532	ZSCAN5C	100	83.468	ENSGGOG00000024785	ZSCAN5A	100	83.468	Gorilla_gorilla
ENSG00000204532	ZSCAN5C	100	94.758	ENSGGOG00000014089	ZSCAN5C	100	94.758	Gorilla_gorilla
ENSG00000204532	ZSCAN5C	99	82.020	ENSMFAG00000039248	ZSCAN5A	99	82.020	Macaca_fascicularis
ENSG00000204532	ZSCAN5C	99	82.020	ENSMMUG00000045637	ZSCAN5A	99	82.020	Macaca_mulatta
ENSG00000204532	ZSCAN5C	99	82.020	ENSMNEG00000041679	ZSCAN5A	99	82.020	Macaca_nemestrina
ENSG00000204532	ZSCAN5C	99	82.828	ENSMLEG00000043375	ZSCAN5A	99	82.828	Mandrillus_leucophaeus
ENSG00000204532	ZSCAN5C	100	89.718	ENSNLEG00000010789	ZSCAN5C	100	89.718	Nomascus_leucogenys
ENSG00000204532	ZSCAN5C	99	80.606	ENSNLEG00000010791	ZSCAN5A	99	80.606	Nomascus_leucogenys
ENSG00000204532	ZSCAN5C	100	96.976	ENSPPAG00000027548	ZSCAN5C	100	96.976	Pan_paniscus
ENSG00000204532	ZSCAN5C	100	83.266	ENSPPAG00000035437	ZSCAN5A	100	83.266	Pan_paniscus
ENSG00000204532	ZSCAN5C	100	83.065	ENSPTRG00000050956	ZSCAN5A	100	83.065	Pan_troglodytes
ENSG00000204532	ZSCAN5C	100	96.573	ENSPTRG00000043651	ZSCAN5C	100	96.573	Pan_troglodytes
ENSG00000204532	ZSCAN5C	100	82.460	ENSPANG00000030358	ZSCAN5C	100	82.460	Papio_anubis
ENSG00000204532	ZSCAN5C	99	82.222	ENSPANG00000032661	ZSCAN5A	99	82.222	Papio_anubis
ENSG00000204532	ZSCAN5C	100	92.540	ENSPPYG00000010443	ZSCAN5C	100	92.540	Pongo_abelii
ENSG00000204532	ZSCAN5C	100	84.274	ENSPPYG00000010444	ZSCAN5A	100	84.274	Pongo_abelii
ENSG00000204532	ZSCAN5C	99	80.122	ENSRBIG00000036844	ZSCAN5C	99	80.122	Rhinopithecus_bieti
ENSG00000204532	ZSCAN5C	100	63.306	ENSRBIG00000033489	ZSCAN5A	100	63.306	Rhinopithecus_bieti
ENSG00000204532	ZSCAN5C	100	83.065	ENSRROG00000041579	ZSCAN5A	100	83.065	Rhinopithecus_roxellana
ENSG00000204532	ZSCAN5C	100	88.306	ENSRROG00000041783	ZSCAN5C	100	88.306	Rhinopithecus_roxellana
ENSG00000204532	ZSCAN5C	100	77.823	ENSSBOG00000017675	-	88	77.980	Saimiri_boliviensis_boliviensis
ENSG00000204532	ZSCAN5C	99	76.768	ENSSBOG00000027579	-	99	76.768	Saimiri_boliviensis_boliviensis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function