RNA binding proteome (RBPome)
| PID | Title | Method |
Time | Author | Doi |
|---|
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & HEK293 | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & HEK293 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 22658674 | Insights into RNA biology from an atlas of mammalian mRNA-binding proteins | RIC & Hela | 2012 May 31 | Castello A | DOI: 10.1016/j.cell.2012.04.031 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & Hela | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
| 30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & MCF10A | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
| 30528433 | The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest | XRNAX & MCF7 | 2018 Dec 6 | Trendel J | DOI: 10.1016/j.cell.2018.11.004 |
Protein-Protein Interaction (PPI)
* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
| Ensembl ID | Gene Symbol | Coverage | Identiy |
Ortholog | Gene Symbol | Coverage | Identiy |
Species |
|---|
| ENSG00000205531 | NAP1L4 | 89 | 76.923 | ENSG00000187109 | NAP1L1 | 100 | 73.239 | Homo_sapiens |
|---|
| ENSG00000205531 | NAP1L4 | 99 | 97.015 | ENSMUSG00000059119 | Nap1l4 | 100 | 94.819 | Mus_musculus |
|---|
| ENSG00000205531 | NAP1L4 | 89 | 77.473 | ENSMUSG00000058799 | Nap1l1 | 91 | 68.421 | Mus_musculus |
|---|
