EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000205916 (Gene tree)
Gene ID
57135
Gene Symbol
DAZ4
Alias
N
Full Name
deleted in azoospermia 4
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
73,241 bases
Position
chrY:24,833,800-24,907,040
Accession
15966
RBP type
canonical RBP
Summary
This gene is a member of the DAZ gene family and is a candidate for the human Y-chromosomal azoospermia factor (AZF). Its expression is restricted to premeiotic germ cells, particularly in spermatogonia. It encodes an RNA-binding protein that is important for spermatogenesis. Four copies of this gene are found on chromosome Y within palindromic duplications; one pair of genes is part of the P2 palindrome and the second pair is part of the P1 palindrome. Each gene contains a 2.4 kb repeat including a 72-bp exon, called the DAZ repeat; the number of DAZ repeats is variable and there are several variations in the sequence of the DAZ repeat. Each copy of the gene also contains a 10.8 kb region that may be amplified; this region includes five exons that encode an RNA recognition motif (RRM) domain. This gene contains two copies of the 10.8 kb repeat. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Feb 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000489430RRM_5PF13893.65.5e-0612
ENSP00000489430RRM_5PF13893.65.5e-0622
ENSP00000371751RRM_5PF13893.66.2e-0612
ENSP00000371751RRM_5PF13893.66.2e-0622
ENSP00000371733RRM_5PF13893.68.1e-0612
ENSP00000371733RRM_5PF13893.68.1e-0622
ENSP00000489430RRM_1PF00076.226e-2412
ENSP00000489430RRM_1PF00076.226e-2422
ENSP00000371751RRM_1PF00076.226.7e-2412
ENSP00000371751RRM_1PF00076.226.7e-2422
ENSP00000371733RRM_1PF00076.228.2e-2412
ENSP00000371733RRM_1PF00076.228.2e-2422
ENSP00000397895RRM_1PF00076.228.8e-1111
ENSP00000389300RRM_1PF00076.229.7e-1111
ENSP00000401363RRM_1PF00076.221.3e-1011
ENSP00000371869RRM_1PF00076.221.6e-1011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000382296DAZ4-2012048XM_005262602ENSP00000371733651 (aa)XP_005262659E7EU38
ENST00000634662DAZ4-2071832-ENSP00000489430579 (aa)-Q86SG3
ENST00000440066DAZ4-2051891-ENSP00000401363486 (aa)-A0A0A0MSS9
ENST00000449750DAZ4-2063271-ENSP00000389300390 (aa)-Q86SG3
ENST00000382432DAZ4-2032405-ENSP00000371869558 (aa)-E7ENA5
ENST00000415508DAZ4-2043277-ENSP00000397895366 (aa)-E7EU39
ENST00000382314DAZ4-2023910-ENSP00000371751603 (aa)-A0A140T8Y1
Gene Model
Click here to download ENSG00000205916's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000205916's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000205916DAZ4100100.000ENSG00000205944DAZ2100100.000
ENSG00000205916DAZ4100100.000ENSG00000188120DAZ1100100.000
ENSG00000205916DAZ47482.486ENSG00000092345DAZL8185.455
ENSG00000205916DAZ410099.085ENSG00000187191DAZ310099.085
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000205916DAZ47783.735ENSAMEG00000009059-7183.735Ailuropoda_melanoleuca
ENSG00000205916DAZ46664.881ENSAPLG00000007738-6661.310Anas_platyrhynchos
ENSG00000205916DAZ46666.467ENSACAG00000007822-6563.473Anolis_carolinensis
ENSG00000205916DAZ47581.443ENSANAG00000034405DAZL6781.443Aotus_nancymaae
ENSG00000205916DAZ48182.143ENSBTAG00000000502DAZL7384.431Bos_taurus
ENSG00000205916DAZ47882.584ENSCJAG00000039120DAZL8282.653Callithrix_jacchus
ENSG00000205916DAZ49983.432ENSCAFG00000005867-10083.929Canis_familiaris
ENSG00000205916DAZ46375.581ENSCAFG00020027335-6575.309Canis_lupus_dingo
ENSG00000205916DAZ47584.431ENSCHIG00000017877DAZL7184.431Capra_hircus
ENSG00000205916DAZ47580.952ENSTSYG00000000788DAZL7180.952Carlito_syrichta
ENSG00000205916DAZ46478.169ENSCAPG00000003209DAZL6977.160Cavia_aperea
ENSG00000205916DAZ46580.240ENSCPOG00000007628DAZL7280.240Cavia_porcellus
ENSG00000205916DAZ47882.051ENSCCAG00000035747DAZL7382.143Cebus_capucinus
ENSG00000205916DAZ47583.708ENSCATG00000009078DAZL7383.708Cercocebus_atys
ENSG00000205916DAZ47478.857ENSCLAG00000006407DAZL7078.462Chinchilla_lanigera
ENSG00000205916DAZ49979.878ENSCSAG00000017742-10079.878Chlorocebus_sabaeus
ENSG00000205916DAZ48283.590ENSCSAG00000009976DAZL7383.673Chlorocebus_sabaeus
ENSG00000205916DAZ47872.222ENSCHOG00000005264-6572.222Choloepus_hoffmanni
ENSG00000205916DAZ45474.809ENSCPBG00000022547-6271.756Chrysemys_picta_bellii
ENSG00000205916DAZ47583.708ENSCANG00000006852DAZL7383.708Colobus_angolensis_palliatus
ENSG00000205916DAZ48179.082ENSCGRG00001021961Dazl7080.838Cricetulus_griseus_chok1gshd
ENSG00000205916DAZ48178.571ENSCGRG00000013515Dazl6980.240Cricetulus_griseus_crigri
ENSG00000205916DAZ46184.940ENSDNOG00000019085-6884.940Dasypus_novemcinctus
ENSG00000205916DAZ46978.082ENSDORG00000011497Dazl6380.342Dipodomys_ordii
ENSG00000205916DAZ47781.481ENSEASG00005005756-6983.750Equus_asinus_asinus
ENSG00000205916DAZ47882.143ENSECAG00000010923-7184.431Equus_caballus
ENSG00000205916DAZ48179.487ENSEEUG00000005973-7181.325Erinaceus_europaeus
ENSG00000205916DAZ48182.653ENSFCAG00000023607-6885.030Felis_catus
ENSG00000205916DAZ46480.000ENSFDAG00000017861DAZL7179.070Fukomys_damarensis
ENSG00000205916DAZ46665.868ENSGALG00000011243DAZL6660.479Gallus_gallus
ENSG00000205916DAZ47482.486ENSGGOG00000023632DAZL7382.653Gorilla_gorilla
ENSG00000205916DAZ47478.977ENSHGLG00000013488DAZL7078.571Heterocephalus_glaber_female
ENSG00000205916DAZ47478.977ENSHGLG00100019389DAZL7078.571Heterocephalus_glaber_male
ENSG00000205916DAZ45548.052ENSIPUG00000006376dazl7264.444Ictalurus_punctatus
ENSG00000205916DAZ46483.234ENSSTOG00000022122-7083.234Ictidomys_tridecemlineatus
ENSG00000205916DAZ47078.443ENSJJAG00000010767Dazl6879.042Jaculus_jaculus
ENSG00000205916DAZ45860.465ENSLACG00000002895-6658.929Latimeria_chalumnae
ENSG00000205916DAZ46146.535ENSLOCG00000006452dazl8059.322Lepisosteus_oculatus
ENSG00000205916DAZ48180.000ENSLAFG00000009132-7181.928Loxodonta_africana
ENSG00000205916DAZ48084.946ENSMFAG00000002406DAZL7884.946Macaca_fascicularis
ENSG00000205916DAZ49785.465ENSMMUG00000041692-9985.465Macaca_mulatta
ENSG00000205916DAZ47584.270ENSMMUG00000011361DAZL8187.273Macaca_mulatta
ENSG00000205916DAZ410078.409ENSMMUG00000045289-10078.409Macaca_mulatta
ENSG00000205916DAZ47784.181ENSMNEG00000038455DAZL7384.270Macaca_nemestrina
ENSG00000205916DAZ47783.616ENSMLEG00000038997DAZL6983.616Mandrillus_leucophaeus
ENSG00000205916DAZ46663.529ENSMGAG00000010878-6660.000Meleagris_gallopavo
ENSG00000205916DAZ47878.462ENSMAUG00000018931Dazl6880.120Mesocricetus_auratus
ENSG00000205916DAZ48181.122ENSMICG00000049389-7183.234Microcebus_murinus
ENSG00000205916DAZ48177.551ENSMOCG00000016627Dazl7079.042Microtus_ochrogaster
ENSG00000205916DAZ48084.940ENSMODG00000014730-7384.940Monodelphis_domestica
ENSG00000205916DAZ48177.041MGP_CAROLIEiJ_G0021735Dazl7079.042Mus_caroli
ENSG00000205916DAZ48177.551ENSMUSG00000010592Dazl7079.042Mus_musculus
ENSG00000205916DAZ47976.531MGP_PahariEiJ_G0020724Dazl7077.844Mus_pahari
ENSG00000205916DAZ48177.551MGP_SPRETEiJ_G0022647Dazl7079.042Mus_spretus
ENSG00000205916DAZ47783.929ENSMPUG00000001426-7183.929Mustela_putorius_furo
ENSG00000205916DAZ46880.723ENSMLUG00000011337-6880.723Myotis_lucifugus
ENSG00000205916DAZ47280.435ENSNGAG00000009472Dazl6976.190Nannospalax_galili
ENSG00000205916DAZ47782.022ENSNLEG00000033788DAZL7382.022Nomascus_leucogenys
ENSG00000205916DAZ46167.857ENSMEUG00000007283-6967.857Notamacropus_eugenii
ENSG00000205916DAZ47772.892ENSOPRG00000001387-6672.892Ochotona_princeps
ENSG00000205916DAZ48475.000ENSODEG00000006167DAZL7075.000Octodon_degus
ENSG00000205916DAZ46268.639ENSOANG00000006742-5774.000Ornithorhynchus_anatinus
ENSG00000205916DAZ48181.026ENSOCUG00000012635-7183.133Oryctolagus_cuniculus
ENSG00000205916DAZ48182.051ENSOGAG00000006983-7184.337Otolemur_garnettii
ENSG00000205916DAZ46383.077ENSOARG00000015474-6783.077Ovis_aries
ENSG00000205916DAZ47282.564ENSPPAG00000037518DAZL7382.564Pan_paniscus
ENSG00000205916DAZ48182.564ENSPPRG00000008794-6885.030Panthera_pardus
ENSG00000205916DAZ48182.564ENSPTIG00000020895-6885.030Panthera_tigris_altaica
ENSG00000205916DAZ49691.279ENSPTRG00000028811-10091.279Pan_troglodytes
ENSG00000205916DAZ47482.486ENSPTRG00000014674DAZL7382.653Pan_troglodytes
ENSG00000205916DAZ49693.939ENSPTRG00000050343-10093.939Pan_troglodytes
ENSG00000205916DAZ410093.413ENSPTRG00000023120-10093.413Pan_troglodytes
ENSG00000205916DAZ49793.939ENSPTRG00000047116-10093.939Pan_troglodytes
ENSG00000205916DAZ47783.616ENSPANG00000015077DAZL7383.708Papio_anubis
ENSG00000205916DAZ46672.455ENSPSIG00000009803-6268.862Pelodiscus_sinensis
ENSG00000205916DAZ46577.397ENSPEMG00000019679Dazl8579.487Peromyscus_maniculatus_bairdii
ENSG00000205916DAZ47782.022ENSPCIG00000028322-7382.022Phascolarctos_cinereus
ENSG00000205916DAZ48782.584ENSPPYG00000014080DAZL7382.653Pongo_abelii
ENSG00000205916DAZ46883.133ENSPCAG00000016182-6883.133Procavia_capensis
ENSG00000205916DAZ46984.337ENSPVAG00000007836-7084.337Pteropus_vampyrus
ENSG00000205916DAZ48081.481ENSRNOG00000023474Dazl7779.042Rattus_norvegicus
ENSG00000205916DAZ47583.616ENSRBIG00000039636DAZL7181.132Rhinopithecus_bieti
ENSG00000205916DAZ47583.708ENSRROG00000036493DAZL7383.708Rhinopithecus_roxellana
ENSG00000205916DAZ47881.538ENSSBOG00000033845DAZL7581.356Saimiri_boliviensis_boliviensis
ENSG00000205916DAZ47781.921ENSSHAG00000005944-7181.921Sarcophilus_harrisii
ENSG00000205916DAZ48179.487ENSSARG00000008473-7181.325Sorex_araneus
ENSG00000205916DAZ46373.077ENSSPUG00000001799-6072.143Sphenodon_punctatus
ENSG00000205916DAZ47784.337ENSSSCG00000030671-7184.337Sus_scrofa
ENSG00000205916DAZ46663.636ENSTGUG00000003145-5867.626Taeniopygia_guttata
ENSG00000205916DAZ48381.026ENSTBEG00000012225-6783.133Tupaia_belangeri
ENSG00000205916DAZ47380.952ENSUAMG00000020299-6483.453Ursus_americanus
ENSG00000205916DAZ45283.453ENSUMAG00000018079-5883.453Ursus_maritimus
ENSG00000205916DAZ48179.487ENSVPAG00000000468-7181.325Vicugna_pacos
ENSG00000205916DAZ47785.030ENSVVUG00000000673-7185.030Vulpes_vulpes
ENSG00000205916DAZ45559.732ENSXETG00000025199dazl5958.904Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0005515protein binding10857750.IPIFunction
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0007275multicellular organism development-IEAProcess
GO:0007281germ cell development-IEAProcess
GO:0007283spermatogenesis-IEAProcess
GO:0008494translation activator activity21873635.IBAFunction
GO:0032991protein-containing complex10857750.IDAComponent
GO:0045948positive regulation of translational initiation21873635.IBAProcess
GO:00709353'-UTR-mediated mRNA stabilization21873635.IBAProcess

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