EuRBPDB

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000215251 (Gene tree)
Gene ID: 60493
Gene Symbol: FASTKD5
Alias: FLJ13149
Full Name: FAST kinase domains 5
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 13,379 bases
Position: chr20:3,146,519-3,159,897
Accession: 25790
RBP type: canonical RBP
Summary: (FAST Kinase Domains 5) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include protein kinase activity. An important paralog of this gene is FASTKD3.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000369618	RAP	PF08373.10	1.9e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
25683715	Mitochondrial RNA Granules Are Centers for Posttranscriptional RNA Processing and Ribosome Biogenesis.	Cell Rep	2015 Feb 17	Antonicka H	doi: 10.1016/j.celrep.2015.01.030

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000380266	FASTKD5-201	2874	-	ENSP00000369618	764 (aa)	-	Q7L8L6

Gene Model

Click here to download ENSG00000215251's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000215251	rs4815570	20	3159658	?	White blood cell count	30595370			EFO_0004308

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000215251's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000215251	FASTKD5	92	37.103	ENSAPOG00000022447	FASTKD5	91	38.369	Acanthochromis_polyacanthus
ENSG00000215251	FASTKD5	99	76.702	ENSAMEG00000019478	FASTKD5	99	76.802	Ailuropoda_melanoleuca
ENSG00000215251	FASTKD5	98	36.576	ENSACIG00000018867	FASTKD5	98	36.654	Amphilophus_citrinellus
ENSG00000215251	FASTKD5	85	39.269	ENSAOCG00000001046	FASTKD5	86	39.269	Amphiprion_ocellaris
ENSG00000215251	FASTKD5	85	38.914	ENSAPEG00000023845	FASTKD5	83	38.739	Amphiprion_percula
ENSG00000215251	FASTKD5	98	35.622	ENSATEG00000013855	FASTKD5	81	38.253	Anabas_testudineus
ENSG00000215251	FASTKD5	87	45.617	ENSAPLG00000004268	FASTKD5	100	45.617	Anas_platyrhynchos
ENSG00000215251	FASTKD5	98	36.780	ENSACLG00000007377	-	86	39.150	Astatotilapia_calliptera
ENSG00000215251	FASTKD5	85	39.389	ENSAMXG00000025880	FASTKD5	88	39.389	Astyanax_mexicanus
ENSG00000215251	FASTKD5	100	79.869	ENSBTAG00000051021	FASTKD5	94	79.869	Bos_taurus
ENSG00000215251	FASTKD5	99	86.614	ENSCJAG00000023290	FASTKD5	99	86.614	Callithrix_jacchus
ENSG00000215251	FASTKD5	100	76.078	ENSCAFG00000024131	FASTKD5	100	76.078	Canis_familiaris
ENSG00000215251	FASTKD5	100	79.869	ENSCHIG00000011596	FASTKD5	94	79.869	Capra_hircus
ENSG00000215251	FASTKD5	100	72.288	ENSCPOG00000023356	FASTKD5	95	72.288	Cavia_porcellus
ENSG00000215251	FASTKD5	100	75.163	ENSCLAG00000017812	FASTKD5	94	75.163	Chinchilla_lanigera
ENSG00000215251	FASTKD5	77	81.818	ENSCHOG00000009828	FASTKD5	80	81.818	Choloepus_hoffmanni
ENSG00000215251	FASTKD5	100	75.033	ENSCGRG00001021453	Fastkd5	96	75.033	Cricetulus_griseus_chok1gshd
ENSG00000215251	FASTKD5	85	35.508	ENSCSEG00000009798	FASTKD5	80	35.508	Cynoglossus_semilaevis
ENSG00000215251	FASTKD5	92	36.544	ENSCVAG00000011433	FASTKD5	89	37.273	Cyprinodon_variegatus
ENSG00000215251	FASTKD5	100	75.033	ENSDNOG00000002729	FASTKD5	95	75.033	Dasypus_novemcinctus
ENSG00000215251	FASTKD5	100	76.209	ENSDORG00000029181	Fastkd5	95	76.209	Dipodomys_ordii
ENSG00000215251	FASTKD5	60	34.624	ENSEBUG00000015648	FASTKD5	63	34.977	Eptatretus_burgeri
ENSG00000215251	FASTKD5	100	82.222	ENSECAG00000005271	FASTKD5	100	82.222	Equus_caballus
ENSG00000215251	FASTKD5	100	73.794	ENSEEUG00000011235	FASTKD5	95	73.794	Erinaceus_europaeus
ENSG00000215251	FASTKD5	89	39.799	ENSELUG00000015818	FASTKD5	98	39.011	Esox_lucius
ENSG00000215251	FASTKD5	86	49.313	ENSFALG00000006577	FASTKD5	97	48.946	Ficedula_albicollis
ENSG00000215251	FASTKD5	100	74.510	ENSFDAG00000017797	FASTKD5	95	74.510	Fukomys_damarensis
ENSG00000215251	FASTKD5	92	38.108	ENSFHEG00000022018	FASTKD5	93	38.507	Fundulus_heteroclitus
ENSG00000215251	FASTKD5	90	38.020	ENSGMOG00000015593	FASTKD5	98	56.923	Gadus_morhua
ENSG00000215251	FASTKD5	89	37.717	ENSGAFG00000001408	FASTKD5	84	38.473	Gambusia_affinis
ENSG00000215251	FASTKD5	99	36.822	ENSHBUG00000022293	-	86	39.117	Haplochromis_burtoni
ENSG00000215251	FASTKD5	85	38.275	ENSHCOG00000014766	FASTKD5	89	38.275	Hippocampus_comes
ENSG00000215251	FASTKD5	91	38.687	ENSIPUG00000018856	FASTKD5	95	38.268	Ictalurus_punctatus
ENSG00000215251	FASTKD5	99	76.378	ENSJJAG00000018838	Fastkd5	95	76.378	Jaculus_jaculus
ENSG00000215251	FASTKD5	92	35.825	ENSKMAG00000017190	FASTKD5	97	35.825	Kryptolebias_marmoratus
ENSG00000215251	FASTKD5	85	37.425	ENSLBEG00000019935	FASTKD5	93	37.425	Labrus_bergylta
ENSG00000215251	FASTKD5	99	48.691	ENSLACG00000011360	FASTKD5	99	48.691	Latimeria_chalumnae
ENSG00000215251	FASTKD5	100	94.634	ENSMMUG00000002982	FASTKD5	100	94.634	Macaca_mulatta
ENSG00000215251	FASTKD5	96	36.554	ENSMAMG00000012918	FASTKD5	83	38.714	Mastacembelus_armatus
ENSG00000215251	FASTKD5	98	36.911	ENSMZEG00005002968	-	81	39.302	Maylandia_zebra
ENSG00000215251	FASTKD5	99	45.876	ENSMGAG00000015767	FASTKD5	99	45.736	Meleagris_gallopavo
ENSG00000215251	FASTKD5	100	75.163	ENSMAUG00000020637	Fastkd5	100	75.163	Mesocricetus_auratus
ENSG00000215251	FASTKD5	100	74.248	ENSMOCG00000018299	Fastkd5	100	74.248	Microtus_ochrogaster
ENSG00000215251	FASTKD5	89	39.301	ENSMMOG00000020097	FASTKD5	92	39.818	Mola_mola
ENSG00000215251	FASTKD5	99	36.869	ENSMALG00000011549	FASTKD5	99	36.869	Monopterus_albus
ENSG00000215251	FASTKD5	98	75.567	MGP_CAROLIEiJ_G0024309	Fastkd5	94	75.163	Mus_caroli
ENSG00000215251	FASTKD5	100	74.379	ENSMUSG00000079043	Fastkd5	94	74.379	Mus_musculus
ENSG00000215251	FASTKD5	100	75.033	MGP_PahariEiJ_G0025754	-	94	75.033	Mus_pahari
ENSG00000215251	FASTKD5	100	74.510	MGP_SPRETEiJ_G0025229	Fastkd5	94	74.510	Mus_spretus
ENSG00000215251	FASTKD5	99	76.440	ENSMPUG00000019143	FASTKD5	94	76.440	Mustela_putorius_furo
ENSG00000215251	FASTKD5	100	80.418	ENSMLUG00000000343	FASTKD5	100	80.418	Myotis_lucifugus
ENSG00000215251	FASTKD5	99	36.671	ENSNBRG00000009402	-	83	39.177	Neolamprologus_brichardi
ENSG00000215251	FASTKD5	100	91.361	ENSNLEG00000007580	FASTKD5	100	91.361	Nomascus_leucogenys
ENSG00000215251	FASTKD5	76	64.602	ENSMEUG00000009895	-	75	64.537	Notamacropus_eugenii
ENSG00000215251	FASTKD5	100	74.641	ENSODEG00000005773	FASTKD5	95	74.641	Octodon_degus
ENSG00000215251	FASTKD5	98	36.877	ENSONIG00000020678	-	81	38.998	Oreochromis_niloticus
ENSG00000215251	FASTKD5	100	78.301	ENSOCUG00000008867	FASTKD5	94	78.301	Oryctolagus_cuniculus
ENSG00000215251	FASTKD5	91	37.465	ENSORLG00000017762	FASTKD5	81	38.204	Oryzias_latipes
ENSG00000215251	FASTKD5	92	37.657	ENSORLG00020018300	FASTKD5	93	35.584	Oryzias_latipes_hni
ENSG00000215251	FASTKD5	92	37.378	ENSORLG00015012190	FASTKD5	81	38.124	Oryzias_latipes_hsok
ENSG00000215251	FASTKD5	91	37.094	ENSOMEG00000006395	FASTKD5	93	37.172	Oryzias_melastigma
ENSG00000215251	FASTKD5	100	79.346	ENSOGAG00000031350	FASTKD5	100	79.346	Otolemur_garnettii
ENSG00000215251	FASTKD5	90	38.873	ENSPKIG00000016079	FASTKD5	90	39.940	Paramormyrops_kingsleyae
ENSG00000215251	FASTKD5	85	38.931	ENSPMGG00000012030	FASTKD5	89	38.931	Periophthalmus_magnuspinnatus
ENSG00000215251	FASTKD5	100	76.863	ENSPEMG00000017742	Fastkd5	100	76.863	Peromyscus_maniculatus_bairdii
ENSG00000215251	FASTKD5	99	64.444	ENSPCIG00000000271	FASTKD5	93	64.444	Phascolarctos_cinereus
ENSG00000215251	FASTKD5	89	37.980	ENSPFOG00000020151	FASTKD5	83	38.739	Poecilia_formosa
ENSG00000215251	FASTKD5	63	59.091	ENSPLAG00000022347	FASTKD5	68	59.091	Poecilia_latipinna
ENSG00000215251	FASTKD5	89	38.150	ENSPMEG00000001153	FASTKD5	82	38.931	Poecilia_mexicana
ENSG00000215251	FASTKD5	94	36.488	ENSPREG00000002221	FASTKD5	96	36.900	Poecilia_reticulata
ENSG00000215251	FASTKD5	100	74.902	ENSPCAG00000000284	FASTKD5	100	74.902	Procavia_capensis
ENSG00000215251	FASTKD5	100	78.954	ENSPVAG00000014209	FASTKD5	100	78.954	Pteropus_vampyrus
ENSG00000215251	FASTKD5	98	36.614	ENSPNYG00000011185	-	86	38.965	Pundamilia_nyererei
ENSG00000215251	FASTKD5	98	39.559	ENSPNAG00000006011	FASTKD5	82	42.325	Pygocentrus_nattereri
ENSG00000215251	FASTKD5	99	61.961	ENSSHAG00000002856	FASTKD5	99	61.961	Sarcophilus_harrisii
ENSG00000215251	FASTKD5	85	39.818	ENSSFOG00015003529	FASTKD5	84	39.818	Scleropages_formosus
ENSG00000215251	FASTKD5	93	36.806	ENSSMAG00000016863	FASTKD5	99	36.806	Scophthalmus_maximus
ENSG00000215251	FASTKD5	98	35.492	ENSSDUG00000002683	FASTKD5	81	37.725	Seriola_dumerili
ENSG00000215251	FASTKD5	98	36.010	ENSSLDG00000001504	FASTKD5	81	38.174	Seriola_lalandi_dorsalis
ENSG00000215251	FASTKD5	100	71.895	ENSSARG00000003130	FASTKD5	95	71.895	Sorex_araneus
ENSG00000215251	FASTKD5	96	48.304	ENSSPUG00000017543	FASTKD5	97	48.304	Sphenodon_punctatus
ENSG00000215251	FASTKD5	84	37.500	ENSSPAG00000008414	FASTKD5	88	37.500	Stegastes_partitus
ENSG00000215251	FASTKD5	87	47.923	ENSTGUG00000010987	FASTKD5	100	47.923	Taeniopygia_guttata
ENSG00000215251	FASTKD5	92	38.154	ENSTRUG00000022056	FASTKD5	87	39.552	Takifugu_rubripes
ENSG00000215251	FASTKD5	85	74.576	ENSTBEG00000012499	FASTKD5	81	74.576	Tupaia_belangeri
ENSG00000215251	FASTKD5	99	77.720	ENSUAMG00000009237	FASTKD5	93	77.720	Ursus_americanus
ENSG00000215251	FASTKD5	99	77.457	ENSUMAG00000002765	FASTKD5	93	77.457	Ursus_maritimus
ENSG00000215251	FASTKD5	100	76.471	ENSVVUG00000025432	FASTKD5	94	76.471	Vulpes_vulpes
ENSG00000215251	FASTKD5	93	49.723	ENSXETG00000027328	fastkd5	99	49.586	Xenopus_tropicalis
ENSG00000215251	FASTKD5	77	60.294	ENSXCOG00000019069	FASTKD5	79	60.294	Xiphophorus_couchianus
ENSG00000215251	FASTKD5	89	38.350	ENSXMAG00000019572	FASTKD5	86	39.065	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000963	mitochondrial RNA processing	25683715.	IMP	Process
GO:0003723	RNA binding	22681889.	HDA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0005515	protein binding	25416956.30126976.	IPI	Function
GO:0005739	mitochondrion	20869947.	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0019843	rRNA binding	25683715.	IDA	Function
GO:0035770	ribonucleoprotein granule	25683715.	IDA	Component
GO:0042645	mitochondrial nucleoid	25683715.	IDA	Component
GO:0045333	cellular respiration	20869947.	ISS	Process