EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000232399 (Gene tree)
Gene ID: 100287238
Gene Symbol: USP17L13
Alias: -
Full Name: ubiquitin specific peptidase 17 like family member 13
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 1,952 bases
Position: chr4:9,224,896-9,226,847
Accession: 44441
RBP type: canonical RBP
Summary: USP17L13 (Ubiquitin Specific Peptidase 17 Like Family Member 13) is a Protein Coding gene. Among its related pathways are Deubiquitination and Metabolism of proteins. Gene Ontology (GO) annotations related to this gene include cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. An important paralog of this gene is USP17L18.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000414392	HABP4_PAI-RBP1	PF04774.15	0.00021	1	1
ENSP00000481603	HABP4_PAI-RBP1	PF04774.15	0.00023	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000429667	USP17L13-201	1593	-	ENSP00000414392	530 (aa)	-	C9JLJ4
ENST00000616303	USP17L13-202	1677	-	ENSP00000481603	558 (aa)	-	A0A087WY87

Gene Model

Click here to download ENSG00000232399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000232399's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000232399	USP17L13	74	95.023	ENSGGOG00000009925	-	94	95.023	Gorilla_gorilla
ENSG00000232399	USP17L13	100	93.962	ENSGGOG00000042639	-	100	93.962	Gorilla_gorilla
ENSG00000232399	USP17L13	100	87.547	ENSGGOG00000043616	-	100	87.547	Gorilla_gorilla
ENSG00000232399	USP17L13	78	94.952	ENSGGOG00000014367	-	100	94.952	Gorilla_gorilla
ENSG00000232399	USP17L13	100	94.528	ENSGGOG00000044031	-	100	94.528	Gorilla_gorilla
ENSG00000232399	USP17L13	100	87.925	ENSMFAG00000036389	-	99	86.738	Macaca_fascicularis
ENSG00000232399	USP17L13	100	87.925	ENSMFAG00000043645	-	99	86.738	Macaca_fascicularis
ENSG00000232399	USP17L13	87	88.961	ENSMFAG00000039016	-	100	88.961	Macaca_fascicularis
ENSG00000232399	USP17L13	100	84.906	ENSMMUG00000039802	-	100	84.906	Macaca_mulatta
ENSG00000232399	USP17L13	100	86.604	ENSMMUG00000047519	-	100	86.604	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.547	ENSMMUG00000041488	-	100	87.547	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.547	ENSMMUG00000049096	-	100	85.842	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.736	ENSMMUG00000049137	-	100	87.736	Macaca_mulatta
ENSG00000232399	USP17L13	100	81.509	ENSMMUG00000044213	-	100	81.509	Macaca_mulatta
ENSG00000232399	USP17L13	99	87.121	ENSMMUG00000045288	-	100	85.125	Macaca_mulatta
ENSG00000232399	USP17L13	100	82.830	ENSMMUG00000042380	-	100	81.362	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.170	ENSMMUG00000041878	-	100	87.170	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.736	ENSMMUG00000029040	-	100	86.022	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.736	ENSMMUG00000040484	-	100	87.736	Macaca_mulatta
ENSG00000232399	USP17L13	100	87.547	ENSMMUG00000042715	-	100	87.547	Macaca_mulatta
ENSG00000232399	USP17L13	99	79.545	ENSMNEG00000033266	-	100	77.957	Macaca_nemestrina
ENSG00000232399	USP17L13	100	77.486	ENSMLEG00000029099	-	100	77.486	Mandrillus_leucophaeus
ENSG00000232399	USP17L13	100	91.509	ENSNLEG00000035477	-	100	91.509	Nomascus_leucogenys
ENSG00000232399	USP17L13	100	84.717	ENSPTRG00000049794	-	100	84.717	Pan_troglodytes
ENSG00000232399	USP17L13	100	89.206	ENSPANG00000035429	-	100	89.206	Papio_anubis
ENSG00000232399	USP17L13	89	87.131	ENSPANG00000032780	-	100	87.131	Papio_anubis
ENSG00000232399	USP17L13	100	87.170	ENSPANG00000029674	-	100	87.170	Papio_anubis
ENSG00000232399	USP17L13	100	86.792	ENSPANG00000032302	-	100	86.792	Papio_anubis
ENSG00000232399	USP17L13	100	87.170	ENSPANG00000031953	-	100	87.170	Papio_anubis
ENSG00000232399	USP17L13	100	66.846	ENSPANG00000034816	-	100	66.846	Papio_anubis
ENSG00000232399	USP17L13	100	86.792	ENSPANG00000035655	-	100	86.792	Papio_anubis
ENSG00000232399	USP17L13	100	86.415	ENSPANG00000029660	-	100	86.415	Papio_anubis
ENSG00000232399	USP17L13	100	85.472	ENSRROG00000032242	-	99	84.588	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0042981	regulation of apoptotic process	21873635.	IBA	Process