EuRBPDB

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  • Basic Information
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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000239382 (Gene tree)
Gene ID
84964
Gene Symbol
ALKBH6
Alias
MGC15677
Full Name
alkB homolog 6
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
5,128 bases
Position
chr19:36,009,116-36,014,243
Accession
28243
RBP type
canonical RBP
Summary
ALKBH6 (AlkB Homolog 6) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include oxidoreductase activity and oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. An important paralog of this gene is ALKBH8.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP000002529842OG-FeII_Oxy_2PF13532.68.3e-1611
ENSP000003681522OG-FeII_Oxy_2PF13532.61.3e-1511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000475223ALKBH6-210610--- (aa)--
ENST00000471323ALKBH6-2093326--- (aa)--
ENST00000481257ALKBH6-211553-ENSP0000043308550 (aa)-H0YD66
ENST00000466196ALKBH6-206556--- (aa)--
ENST00000468004ALKBH6-207818--- (aa)--
ENST00000461668ALKBH6-204793-ENSP0000043388547 (aa)-H0YDL7
ENST00000392183ALKBH6-2031004--- (aa)--
ENST00000495116ALKBH6-216630--- (aa)--
ENST00000485128ALKBH6-212959-ENSP00000436742133 (aa)-E9PI76
ENST00000497999ALKBH6-217725-ENSP0000043615672 (aa)-H0YEM5
ENST00000252984ALKBH6-201955XM_005259357ENSP00000252984238 (aa)XP_005259414Q3KRA9
ENST00000590666ALKBH6-218472--- (aa)--
ENST00000470859ALKBH6-208670--- (aa)--
ENST00000490483ALKBH6-214861-ENSP0000043315693 (aa)-H0YD83
ENST00000462793ALKBH6-205700--- (aa)--
ENST00000490986ALKBH6-215977-ENSP00000435496132 (aa)-H0YEC4
ENST00000378875ALKBH6-202973-ENSP00000368152266 (aa)-Q3KRA9
ENST00000592353ALKBH6-219528--- (aa)--
ENST00000486389ALKBH6-2131525-ENSP00000474158110 (aa)-S4R3C7
Gene Model
Click here to download ENSG00000239382's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000239382Child Development Disorders, Pervasive2.0004600E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000239382's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000239382ALKBH610085.774ENSAMEG00000000900ALKBH610085.774Ailuropoda_melanoleuca
ENSG00000239382ALKBH69359.459ENSACIG00000006337alkbh69458.559Amphilophus_citrinellus
ENSG00000239382ALKBH610056.485ENSAOCG00000023885alkbh69555.649Amphiprion_ocellaris
ENSG00000239382ALKBH69658.079ENSAPEG00000003934alkbh69757.205Amphiprion_percula
ENSG00000239382ALKBH69557.709ENSATEG00000008859alkbh69656.637Anabas_testudineus
ENSG00000239382ALKBH610097.479ENSANAG00000034195ALKBH610096.617Aotus_nancymaae
ENSG00000239382ALKBH69659.307ENSACLG00000001836alkbh69657.895Astatotilapia_calliptera
ENSG00000239382ALKBH69658.079ENSAMXG00000033280alkbh69557.642Astyanax_mexicanus
ENSG00000239382ALKBH610093.697ENSBTAG00000019678ALKBH610089.474Bos_taurus
ENSG00000239382ALKBH69539.381WBGene00007202B0564.29439.381Caenorhabditis_elegans
ENSG00000239382ALKBH610097.059ENSCJAG00000043322ALKBH610096.617Callithrix_jacchus
ENSG00000239382ALKBH610092.437ENSCAFG00000006669ALKBH610089.474Canis_familiaris
ENSG00000239382ALKBH610084.034ENSCAFG00020018151ALKBH610084.034Canis_lupus_dingo
ENSG00000239382ALKBH610092.857ENSCHIG00000015494ALKBH610092.857Capra_hircus
ENSG00000239382ALKBH68985.915ENSCAPG00000010410ALKBH69685.915Cavia_aperea
ENSG00000239382ALKBH610091.176ENSCPOG00000035954ALKBH610091.176Cavia_porcellus
ENSG00000239382ALKBH610096.218ENSCCAG00000028476ALKBH610095.489Cebus_capucinus
ENSG00000239382ALKBH610098.319ENSCATG00000029769ALKBH610098.319Cercocebus_atys
ENSG00000239382ALKBH610091.176ENSCLAG00000014273ALKBH610091.176Chinchilla_lanigera
ENSG00000239382ALKBH610097.899ENSCSAG00000004282ALKBH610097.368Chlorocebus_sabaeus
ENSG00000239382ALKBH69665.086ENSCPBG00000006841ALKBH69364.224Chrysemys_picta_bellii
ENSG00000239382ALKBH68843.590ENSCING00000020875-9151.799Ciona_intestinalis
ENSG00000239382ALKBH67245.556ENSCSAVG00000006115-8845.556Ciona_savignyi
ENSG00000239382ALKBH610085.714ENSCANG00000029705ALKBH610085.714Colobus_angolensis_palliatus
ENSG00000239382ALKBH610090.756ENSCGRG00001022841Alkbh610090.756Cricetulus_griseus_chok1gshd
ENSG00000239382ALKBH610053.361ENSCSEG00000016413alkbh69952.521Cynoglossus_semilaevis
ENSG00000239382ALKBH69658.079ENSCVAG00000004657alkbh69557.205Cyprinodon_variegatus
ENSG00000239382ALKBH69756.223ENSDARG00000077253alkbh69755.794Danio_rerio
ENSG00000239382ALKBH610092.857ENSDNOG00000033659ALKBH610092.857Dasypus_novemcinctus
ENSG00000239382ALKBH69348.214FBgn0032259CG61449647.768Drosophila_melanogaster
ENSG00000239382ALKBH68893.162ENSETEG00000004833ALKBH610087.791Echinops_telfairi
ENSG00000239382ALKBH69851.095ENSEBUG00000002396alkbh69948.175Eptatretus_burgeri
ENSG00000239382ALKBH610093.697ENSEASG00005001464ALKBH69993.388Equus_asinus_asinus
ENSG00000239382ALKBH610077.824ENSEEUG00000002238ALKBH610076.538Erinaceus_europaeus
ENSG00000239382ALKBH610057.261ENSELUG00000017352alkbh69956.432Esox_lucius
ENSG00000239382ALKBH610093.697ENSFCAG00000006619ALKBH69993.388Felis_catus
ENSG00000239382ALKBH610089.496ENSFDAG00000012270ALKBH610089.496Fukomys_damarensis
ENSG00000239382ALKBH69059.070ENSGMOG00000020607alkbh610059.070Gadus_morhua
ENSG00000239382ALKBH610055.882ENSGAFG00000010793alkbh69957.563Gambusia_affinis
ENSG00000239382ALKBH68958.140ENSGACG00000002647alkbh69956.808Gasterosteus_aculeatus
ENSG00000239382ALKBH67460.221ENSGAGG00000006766ALKBH68159.116Gopherus_agassizii
ENSG00000239382ALKBH610099.160ENSGGOG00000037040ALKBH610099.160Gorilla_gorilla
ENSG00000239382ALKBH69658.333ENSHBUG00000023541alkbh69757.456Haplochromis_burtoni
ENSG00000239382ALKBH610091.597ENSHGLG00000008091ALKBH610091.597Heterocephalus_glaber_female
ENSG00000239382ALKBH610091.597ENSHGLG00100012062ALKBH610091.597Heterocephalus_glaber_male
ENSG00000239382ALKBH69860.000ENSHCOG00000000308alkbh69759.149Hippocampus_comes
ENSG00000239382ALKBH610056.485ENSIPUG00000018672alkbh69955.649Ictalurus_punctatus
ENSG00000239382ALKBH610092.017ENSSTOG00000009337ALKBH610092.017Ictidomys_tridecemlineatus
ENSG00000239382ALKBH69990.717ENSJJAG00000019843Alkbh610089.958Jaculus_jaculus
ENSG00000239382ALKBH69757.021ENSKMAG00000003959alkbh69955.983Kryptolebias_marmoratus
ENSG00000239382ALKBH69658.696ENSLBEG00000028172alkbh69657.391Labrus_bergylta
ENSG00000239382ALKBH610054.286ENSLACG00000002470alkbh69954.286Latimeria_chalumnae
ENSG00000239382ALKBH69958.333ENSLOCG00000014771alkbh69957.917Lepisosteus_oculatus
ENSG00000239382ALKBH610097.479ENSMFAG00000042361ALKBH610097.479Macaca_fascicularis
ENSG00000239382ALKBH610098.319ENSMMUG00000019700ALKBH610098.319Macaca_mulatta
ENSG00000239382ALKBH610098.319ENSMNEG00000032917ALKBH610098.319Macaca_nemestrina
ENSG00000239382ALKBH69658.515ENSMAMG00000010698alkbh69657.642Mastacembelus_armatus
ENSG00000239382ALKBH69659.307ENSMZEG00005014192alkbh69657.895Maylandia_zebra
ENSG00000239382ALKBH610090.756ENSMAUG00000013258Alkbh610090.756Mesocricetus_auratus
ENSG00000239382ALKBH610094.538ENSMICG00000033414ALKBH610094.538Microcebus_murinus
ENSG00000239382ALKBH610091.597ENSMOCG00000008724Alkbh610091.597Microtus_ochrogaster
ENSG00000239382ALKBH610052.653ENSMMOG00000019353alkbh69952.245Mola_mola
ENSG00000239382ALKBH610055.649ENSMALG00000013511alkbh69954.812Monopterus_albus
ENSG00000239382ALKBH610056.067ENSMALG00000003655-9955.230Monopterus_albus
ENSG00000239382ALKBH610090.756MGP_CAROLIEiJ_G0029512Alkbh610090.756Mus_caroli
ENSG00000239382ALKBH610091.176ENSMUSG00000042831Alkbh610091.176Mus_musculus
ENSG00000239382ALKBH610091.597MGP_PahariEiJ_G0012746Alkbh610091.597Mus_pahari
ENSG00000239382ALKBH610091.597MGP_SPRETEiJ_G0030608Alkbh610091.597Mus_spretus
ENSG00000239382ALKBH610092.437ENSMPUG00000005804ALKBH610079.125Mustela_putorius_furo
ENSG00000239382ALKBH69983.544ENSMLUG00000030420ALKBH69982.278Myotis_lucifugus
ENSG00000239382ALKBH610091.176ENSNGAG00000012659Alkbh69889.879Nannospalax_galili
ENSG00000239382ALKBH69659.211ENSNBRG00000018188alkbh69658.333Neolamprologus_brichardi
ENSG00000239382ALKBH610097.899ENSNLEG00000011624ALKBH610097.899Nomascus_leucogenys
ENSG00000239382ALKBH68374.619ENSMEUG00000007262ALKBH69974.619Notamacropus_eugenii
ENSG00000239382ALKBH610090.756ENSODEG00000015515ALKBH610090.756Octodon_degus
ENSG00000239382ALKBH610058.159ENSONIG00000021156alkbh69957.322Oreochromis_niloticus
ENSG00000239382ALKBH610092.437ENSOCUG00000017671ALKBH610092.437Oryctolagus_cuniculus
ENSG00000239382ALKBH69258.824ENSORLG00000015103alkbh69258.182Oryzias_latipes
ENSG00000239382ALKBH610056.904ENSORLG00020004747alkbh69056.303Oryzias_latipes_hni
ENSG00000239382ALKBH69959.259ENSORLG00015006159alkbh69166.412Oryzias_latipes_hsok
ENSG00000239382ALKBH610055.230ENSOMEG00000022075alkbh69954.622Oryzias_melastigma
ENSG00000239382ALKBH610092.017ENSOGAG00000011490ALKBH610089.474Otolemur_garnettii
ENSG00000239382ALKBH68894.872ENSOARG00000005191ALKBH67389.423Ovis_aries
ENSG00000239382ALKBH610099.248ENSPPAG00000036802ALKBH610099.248Pan_paniscus
ENSG00000239382ALKBH610093.277ENSPPRG00000011495ALKBH610086.940Panthera_pardus
ENSG00000239382ALKBH610099.248ENSPTRG00000039251ALKBH610099.248Pan_troglodytes
ENSG00000239382ALKBH610098.319ENSPANG00000012372ALKBH610097.744Papio_anubis
ENSG00000239382ALKBH610057.983ENSPKIG00000015358alkbh610057.741Paramormyrops_kingsleyae
ENSG00000239382ALKBH69665.517ENSPSIG00000012465ALKBH68265.086Pelodiscus_sinensis
ENSG00000239382ALKBH69754.310ENSPMGG00000012259alkbh69754.310Periophthalmus_magnuspinnatus
ENSG00000239382ALKBH610091.597ENSPEMG00000001920Alkbh610091.597Peromyscus_maniculatus_bairdii
ENSG00000239382ALKBH69258.696ENSPMAG00000005422alkbh69257.642Petromyzon_marinus
ENSG00000239382ALKBH610055.882ENSPFOG00000019931alkbh68557.563Poecilia_formosa
ENSG00000239382ALKBH610055.882ENSPLAG00000001926alkbh68556.723Poecilia_latipinna
ENSG00000239382ALKBH69257.798ENSPMEG00000022559alkbh69458.716Poecilia_mexicana
ENSG00000239382ALKBH69558.590ENSPREG00000001145alkbh69559.471Poecilia_reticulata
ENSG00000239382ALKBH610097.899ENSPPYG00000029809ALKBH69797.719Pongo_abelii
ENSG00000239382ALKBH610091.597ENSPCAG00000018829ALKBH610087.640Procavia_capensis
ENSG00000239382ALKBH610092.857ENSPCOG00000024098ALKBH610090.226Propithecus_coquereli
ENSG00000239382ALKBH68392.386ENSPVAG00000024193ALKBH610073.783Pteropus_vampyrus
ENSG00000239382ALKBH69659.211ENSPNYG00000011487alkbh69658.333Pundamilia_nyererei
ENSG00000239382ALKBH69959.072ENSPNAG00000024220alkbh69957.627Pygocentrus_nattereri
ENSG00000239382ALKBH610090.336ENSRNOG00000047943Alkbh610090.336Rattus_norvegicus
ENSG00000239382ALKBH610090.336ENSRNOG00000025216LOC10834810610090.336Rattus_norvegicus
ENSG00000239382ALKBH610098.319ENSRBIG00000010440ALKBH610098.319Rhinopithecus_bieti
ENSG00000239382ALKBH610097.059ENSSBOG00000027983ALKBH610096.617Saimiri_boliviensis_boliviensis
ENSG00000239382ALKBH610075.314ENSSHAG00000010575ALKBH69875.314Sarcophilus_harrisii
ENSG00000239382ALKBH69659.565ENSSFOG00015005576alkbh69960.360Scleropages_formosus
ENSG00000239382ALKBH69457.589ENSSMAG00000016306alkbh69356.696Scophthalmus_maximus
ENSG00000239382ALKBH69557.522ENSSDUG00000007406alkbh69656.637Seriola_dumerili
ENSG00000239382ALKBH610055.649ENSSLDG00000009873-9954.812Seriola_lalandi_dorsalis
ENSG00000239382ALKBH69557.965ENSSLDG00000015256alkbh69657.080Seriola_lalandi_dorsalis
ENSG00000239382ALKBH610059.091ENSSPUG00000011895ALKBH69758.678Sphenodon_punctatus
ENSG00000239382ALKBH69857.021ENSSPAG00000000608alkbh69956.170Stegastes_partitus
ENSG00000239382ALKBH610092.857ENSSSCG00000002910ALKBH610092.857Sus_scrofa
ENSG00000239382ALKBH610056.904ENSTNIG00000002453alkbh69955.882Tetraodon_nigroviridis
ENSG00000239382ALKBH610094.118ENSTTRG00000021443ALKBH610089.850Tursiops_truncatus
ENSG00000239382ALKBH610093.277ENSUAMG00000020580ALKBH69492.308Ursus_americanus
ENSG00000239382ALKBH610092.857ENSVVUG00000013636ALKBH610092.857Vulpes_vulpes
ENSG00000239382ALKBH69661.135ENSXETG00000002842alkbh69660.262Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005515protein binding22948820.IPIFunction
GO:0005634nucleus-IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005737cytoplasm-IEAComponent
GO:0005925focal adhesion-IDAComponent
GO:0046872metal ion binding-IEAFunction
GO:0051213dioxygenase activity-IEAFunction
GO:0055114oxidation-reduction process-IEAProcess

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr1936010639SilentnovelI127I0.11
BLCAchr1936010526Intronnovel0.06
BLCAchr1936010382Intronnovel0.5
BLCAchr1936010988Missense_MutationnovelR81L0.17
CESCchr1936010683In_Frame_InsnovelM112_P113insGT0.042OG-FeII_Oxy_2
CESCchr1936010980Missense_Mutationrs756492251D84N0.27
CESCchr19360134095'UTRNA0.15
COADchr1936010983Missense_Mutationrs377096899V83M0.37
COADchr19360142385'Flanknovel0.31
COADchr1936010326Intronnovel0.5
COADchr1936010429Intronnovel0.08
COADchr1936011425Missense_MutationnovelG55R0.31
COADchr1936011027Missense_MutationnovelR68Q0.29
COADchr19360142315'Flanknovel0.29
COADchr19360141835'UTRnovel0.26
COADchr1936010557Intronnovel0.16
GBMchr1936010483Intronnovel0.27
GBMchr1936010970Missense_MutationnovelS87L0.09
HNSCchr1936010951SilentnovelG93G0.06
KIRCchr1936013373Missense_MutationNAP9T0.24
KIRCchr1936010480Intronnovel0.36
KIRCchr19360134035'UTRNA0.25
LGGchr1936010893Splice_SiteNAX112_splice0.27
LGGchr1936010965Missense_MutationnovelL89I0.15
LUADchr1936013343Splice_SitenovelX18_splice0.37
LUADchr1936010572Missense_Mutationrs758745205E150K0.072OG-FeII_Oxy_2
LUADchr1936013034Missense_MutationnovelY37C0.4
LUADchr1936014174Splice_Sitenovel0.36
LUSCchr19360141905'UTRnovel0.28
LUSCchr1936010910Missense_MutationnovelP107R0.142OG-FeII_Oxy_2
LUSCchr1936010405Intronnovel0.09
LUSCchr1936010914Missense_MutationNAL106V0.052OG-FeII_Oxy_2
LUSCchr1936010716Intronnovel0.11
LUSCchr1936010355Intronnovel0.23
LUSCchr1936011027Missense_MutationnovelR68P0.2
LUSCchr1936010866Intronnovel0.31
OVchr1936013020Splice_SitenovelX41_splice0.06
PAADchr1936011010Missense_Mutationrs149341422R74W0.26
READchr1936010635Missense_MutationnovelL129M0.32OG-FeII_Oxy_2
SARCchr1936011043Missense_MutationnovelG63R0.21
SARCchr1936010847Intronnovel0.07
SKCMchr1936013383Silentrs148155004D5D0.45
SKCMchr1936013041Missense_Mutationrs760454320E35K0.33
SKCMchr1936010867Intronnovel0.28
SKCMchr19360142195'UTRrs7621055050.45
STADchr1936010599Missense_Mutationrs765212006R141W0.282OG-FeII_Oxy_2
STADchr1936010863Intronnovel0.22
STADchr1936010536Intronnovel0.09
STADchr1936011445Missense_MutationnovelP48R0.07
STADchr1936010409Intronnovel0.16
STADchr1936010694Intronnovel0.09
STADchr1936010514Intronnovel0.36
STADchr1936013072Nonsense_MutationnovelY24*0.21
STADchr1936010872Intronrs1462255680.47
THCAchr1936010476Intronnovel0.38
THCAchr1936011037Missense_MutationnovelP65S0.42
UCECchr1936013073Missense_MutationNAY24C0.33
UCECchr1936013026Nonsense_MutationNAR40*0.32
UCECchr1936010631Missense_MutationnovelG130D0.572OG-FeII_Oxy_2
UCECchr1936010572Nonsense_Mutationrs758745205E150*0.542OG-FeII_Oxy_2
UCECchr1936010873Intronrs7717997810.31
UCECchr1936010878Intronrs3698995330.25
UCECchr1936010548Intronnovel0.41
UCECchr1936010818Intronnovel0.07
UCECchr1936010713Intronnovel0.07
UCECchr1936010878Intronrs3698995330.25
UCECchr1936013025Missense_MutationNAR40Q0.25
UCECchr1936010917Missense_MutationnovelY105H0.252OG-FeII_Oxy_2
UCECchr1936013018Splice_Regionnovel0.33
UCECchr1936010671Nonsense_MutationnovelG117*0.12OG-FeII_Oxy_2
UCECchr1936013057Missense_MutationNAF29L0.37
UCECchr1936010878Intronrs3698995330.16
UCECchr1936011027Missense_MutationnovelR68Q0.41
UCECchr1936010925Missense_MutationnovelV102A0.442OG-FeII_Oxy_2
UCECchr1936010926Missense_Mutationrs750624920V102M0.282OG-FeII_Oxy_2

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
READDEL0.03030.23023

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

ACC0.00015

Kaplan-Meier Survival Analysis

HNSC0.00094

Kaplan-Meier Survival Analysis

SKCM0.004

Kaplan-Meier Survival Analysis

PRAD0.017

Kaplan-Meier Survival Analysis

BRCA0.0073

Kaplan-Meier Survival Analysis

COAD0.027

Kaplan-Meier Survival Analysis

PAAD0.0008

Kaplan-Meier Survival Analysis

BLCA0.00097

Kaplan-Meier Survival Analysis

UCEC0.024

Kaplan-Meier Survival Analysis

LGG0.0064

Kaplan-Meier Survival Analysis


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