EuRBPDB

Description

RBDs

Literatures

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSG00000248643 (Gene tree)
Gene ID: 100526737
Gene Symbol: RBM14-RBM4
Alias: -
Full Name: RBM14-RBM4 readthrough
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 29,892 bases
Position: chr11:66,616,582-66,646,473
Accession: 38840
RBP type: canonical RBP
Summary: This locus represents naturally occurring read-through transcription between the neighboring RBM14 (RNA binding motif protein 14) and RBM4 (RNA binding motif protein 4) genes. Alternative splicing results in multiple transcript variants, one of which encodes a fusion protein that shares sequence identity with each individual gene product. This fusion protein contains RRM and zinc finger domains, and it functions to stimulate transcription in a hormone and receptor-dependent manner. [provided by RefSeq, Nov 2010]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000388552	zf-CCHC	PF00098.23	6.3e-07	1	1
ENSP00000421279	RRM_1	PF00076.22	1e-18	1	2
ENSP00000421279	RRM_1	PF00076.22	1e-18	2	2
ENSP00000388552	RRM_1	PF00076.22	1.8e-17	1	2
ENSP00000388552	RRM_1	PF00076.22	1.8e-17	2	2

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
25414336	Alanine repeats influence protein localization in splicing speckles and paraspeckles.	Nucleic Acids Res	2014 Dec 16	Chang SH	doi: 10.1093/nar/gku1159

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000412278	RBM14-RBM4-201	1566	-	ENSP00000388552	339 (aa)	-	UPI0001641710
ENST00000511114	RBM14-RBM4-204	523	-	-	- (aa)	-	-
ENST00000500635	RBM14-RBM4-203	829	-	ENSP00000421279	118 (aa)	-	A0A0A6YYI9
ENST00000421355	RBM14-RBM4-202	2034	-	ENSP00000395880	147 (aa)	-	A0A0A0MSL8

Gene Model

Click here to download ENSG00000248643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000248643's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000248643	RBM14-RBM4	100	64.110	ENSAMEG00000010906	RBM4B	99	64.208	Ailuropoda_melanoleuca
ENSG00000248643	RBM14-RBM4	100	74.044	ENSAMEG00000010914	RBM4	99	73.224	Ailuropoda_melanoleuca
ENSG00000248643	RBM14-RBM4	100	63.562	ENSANAG00000023478	RBM4B	99	63.661	Aotus_nancymaae
ENSG00000248643	RBM14-RBM4	100	36.054	ENSANAG00000033986	-	85	40.179	Aotus_nancymaae
ENSG00000248643	RBM14-RBM4	100	64.384	ENSBTAG00000000423	RBM4B	99	64.481	Bos_taurus
ENSG00000248643	RBM14-RBM4	100	71.233	ENSBTAG00000031688	RBM4	99	71.781	Bos_taurus
ENSG00000248643	RBM14-RBM4	100	63.288	ENSCJAG00000013666	RBM4B	99	63.388	Callithrix_jacchus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSCAFG00000012388	RBM4	99	73.224	Canis_familiaris
ENSG00000248643	RBM14-RBM4	100	63.836	ENSCAFG00000012378	RBM4B	99	63.934	Canis_familiaris
ENSG00000248643	RBM14-RBM4	100	63.836	ENSCAFG00020015519	RBM4B	99	63.934	Canis_lupus_dingo
ENSG00000248643	RBM14-RBM4	100	74.044	ENSCAFG00020015515	RBM4	99	73.224	Canis_lupus_dingo
ENSG00000248643	RBM14-RBM4	100	71.233	ENSCHIG00000020613	RBM4	99	71.781	Capra_hircus
ENSG00000248643	RBM14-RBM4	100	64.384	ENSCHIG00000008907	RBM4B	99	64.481	Capra_hircus
ENSG00000248643	RBM14-RBM4	67	82.301	ENSTSYG00000009580	RBM4B	99	73.134	Carlito_syrichta
ENSG00000248643	RBM14-RBM4	69	39.024	ENSTSYG00000036168	-	78	36.275	Carlito_syrichta
ENSG00000248643	RBM14-RBM4	100	74.044	ENSCAPG00000016600	RBM4	99	73.224	Cavia_aperea
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCAPG00000009570	RBM4B	99	63.661	Cavia_aperea
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCPOG00000013689	RBM4B	99	63.661	Cavia_porcellus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSCPOG00000013194	RBM4	99	73.224	Cavia_porcellus
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCCAG00000016501	RBM4B	99	63.661	Cebus_capucinus
ENSG00000248643	RBM14-RBM4	95	41.964	ENSCCAG00000007508	-	99	41.964	Cebus_capucinus
ENSG00000248643	RBM14-RBM4	95	40.741	ENSCCAG00000023319	-	99	41.584	Cebus_capucinus
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCATG00000035353	RBM4B	99	63.661	Cercocebus_atys
ENSG00000248643	RBM14-RBM4	100	73.770	ENSCLAG00000014756	RBM4	99	72.951	Chinchilla_lanigera
ENSG00000248643	RBM14-RBM4	100	63.288	ENSCLAG00000015287	RBM4B	99	63.661	Chinchilla_lanigera
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCSAG00000008361	RBM4B	99	63.661	Chlorocebus_sabaeus
ENSG00000248643	RBM14-RBM4	100	64.658	ENSCHOG00000002892	RBM4B	99	64.754	Choloepus_hoffmanni
ENSG00000248643	RBM14-RBM4	67	97.357	ENSCHOG00000009753	RBM14-RBM4	100	97.357	Choloepus_hoffmanni
ENSG00000248643	RBM14-RBM4	100	51.436	ENSCPBG00000023800	-	99	51.832	Chrysemys_picta_bellii
ENSG00000248643	RBM14-RBM4	100	63.562	ENSCANG00000021868	RBM4B	99	63.661	Colobus_angolensis_palliatus
ENSG00000248643	RBM14-RBM4	100	70.685	ENSCGRG00001016609	-	99	71.233	Cricetulus_griseus_chok1gshd
ENSG00000248643	RBM14-RBM4	100	60.548	ENSCGRG00001024693	Rbm4b	99	62.022	Cricetulus_griseus_chok1gshd
ENSG00000248643	RBM14-RBM4	100	70.685	ENSCGRG00000010183	-	99	71.233	Cricetulus_griseus_crigri
ENSG00000248643	RBM14-RBM4	100	60.548	ENSCGRG00000012112	Rbm4b	99	62.022	Cricetulus_griseus_crigri
ENSG00000248643	RBM14-RBM4	100	74.044	ENSDNOG00000032390	RBM4	99	73.224	Dasypus_novemcinctus
ENSG00000248643	RBM14-RBM4	100	63.562	ENSDNOG00000045639	-	99	63.661	Dasypus_novemcinctus
ENSG00000248643	RBM14-RBM4	100	64.110	ENSDNOG00000019500	-	99	64.208	Dasypus_novemcinctus
ENSG00000248643	RBM14-RBM4	100	70.959	ENSDORG00000004538	-	99	71.233	Dipodomys_ordii
ENSG00000248643	RBM14-RBM4	100	60.548	ENSDORG00000029108	Rbm4b	99	62.022	Dipodomys_ordii
ENSG00000248643	RBM14-RBM4	67	63.717	ENSETEG00000018142	-	100	64.159	Echinops_telfairi
ENSG00000248643	RBM14-RBM4	100	63.836	ENSEASG00005005068	RBM4B	99	63.934	Equus_asinus_asinus
ENSG00000248643	RBM14-RBM4	100	72.603	ENSEASG00005005064	RBM4	99	72.329	Equus_asinus_asinus
ENSG00000248643	RBM14-RBM4	100	63.562	ENSECAG00000022987	RBM4B	99	63.661	Equus_caballus
ENSG00000248643	RBM14-RBM4	100	72.603	ENSECAG00000022940	RBM4	99	72.329	Equus_caballus
ENSG00000248643	RBM14-RBM4	100	64.033	ENSEEUG00000000058	RBM4B	99	64.033	Erinaceus_europaeus
ENSG00000248643	RBM14-RBM4	100	63.014	ENSFCAG00000007394	RBM4B	99	64.481	Felis_catus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSFCAG00000029651	RBM4	99	73.224	Felis_catus
ENSG00000248643	RBM14-RBM4	100	45.161	ENSFALG00000002073	-	99	44.744	Ficedula_albicollis
ENSG00000248643	RBM14-RBM4	100	73.224	ENSFDAG00000005447	RBM4	99	72.404	Fukomys_damarensis
ENSG00000248643	RBM14-RBM4	100	63.288	ENSFDAG00000015530	RBM4B	99	63.661	Fukomys_damarensis
ENSG00000248643	RBM14-RBM4	94	38.710	ENSFDAG00000013661	-	93	38.710	Fukomys_damarensis
ENSG00000248643	RBM14-RBM4	95	41.964	ENSGALG00000040489	-	83	41.964	Gallus_gallus
ENSG00000248643	RBM14-RBM4	100	53.316	ENSGALG00000037946	-	99	52.926	Gallus_gallus
ENSG00000248643	RBM14-RBM4	100	52.604	ENSGAGG00000008553	-	99	52.219	Gopherus_agassizii
ENSG00000248643	RBM14-RBM4	86	36.634	ENSGGOG00000043023	-	76	36.634	Gorilla_gorilla
ENSG00000248643	RBM14-RBM4	100	63.562	ENSGGOG00000011698	RBM4B	99	63.661	Gorilla_gorilla
ENSG00000248643	RBM14-RBM4	100	63.836	ENSHGLG00000016412	-	99	63.934	Heterocephalus_glaber_female
ENSG00000248643	RBM14-RBM4	100	51.507	ENSHGLG00000002853	-	99	52.459	Heterocephalus_glaber_female
ENSG00000248643	RBM14-RBM4	100	51.622	ENSHGLG00000000117	-	95	52.941	Heterocephalus_glaber_female
ENSG00000248643	RBM14-RBM4	100	73.224	ENSHGLG00000009991	RBM4	99	72.404	Heterocephalus_glaber_female
ENSG00000248643	RBM14-RBM4	100	62.842	ENSHGLG00100003978	-	99	63.215	Heterocephalus_glaber_male
ENSG00000248643	RBM14-RBM4	95	51.576	ENSHGLG00100020033	-	99	52.571	Heterocephalus_glaber_male
ENSG00000248643	RBM14-RBM4	100	58.630	ENSHGLG00100003854	RBM4	81	96.825	Heterocephalus_glaber_male
ENSG00000248643	RBM14-RBM4	100	74.317	ENSSTOG00000022811	RBM4	99	73.497	Ictidomys_tridecemlineatus
ENSG00000248643	RBM14-RBM4	100	63.836	ENSSTOG00000011226	RBM4B	99	63.934	Ictidomys_tridecemlineatus
ENSG00000248643	RBM14-RBM4	100	63.128	ENSJJAG00000020870	Rbm4b	99	62.953	Jaculus_jaculus
ENSG00000248643	RBM14-RBM4	83	32.323	ENSJJAG00000003168	-	64	32.323	Jaculus_jaculus
ENSG00000248643	RBM14-RBM4	100	71.038	ENSLAFG00000028147	-	99	70.492	Loxodonta_africana
ENSG00000248643	RBM14-RBM4	100	59.726	ENSLAFG00000002285	RBM4B	99	61.202	Loxodonta_africana
ENSG00000248643	RBM14-RBM4	100	63.562	ENSMFAG00000033927	RBM4B	99	63.661	Macaca_fascicularis
ENSG00000248643	RBM14-RBM4	100	63.562	ENSMNEG00000043371	RBM4B	99	63.661	Macaca_nemestrina
ENSG00000248643	RBM14-RBM4	100	63.562	ENSMLEG00000028563	RBM4B	99	63.661	Mandrillus_leucophaeus
ENSG00000248643	RBM14-RBM4	100	59.726	ENSMAUG00000017027	Rbm4b	99	60.929	Mesocricetus_auratus
ENSG00000248643	RBM14-RBM4	95	41.071	ENSMICG00000047975	-	95	41.071	Microcebus_murinus
ENSG00000248643	RBM14-RBM4	100	64.110	ENSMICG00000003820	RBM4B	99	64.208	Microcebus_murinus
ENSG00000248643	RBM14-RBM4	95	40.323	ENSMICG00000003817	-	99	40.179	Microcebus_murinus
ENSG00000248643	RBM14-RBM4	100	60.274	ENSMOCG00000001835	Rbm4b	99	61.749	Microtus_ochrogaster
ENSG00000248643	RBM14-RBM4	100	68.022	ENSMODG00000008056	-	99	67.480	Monodelphis_domestica
ENSG00000248643	RBM14-RBM4	100	68.852	MGP_CAROLIEiJ_G0022516	-	99	71.311	Mus_caroli
ENSG00000248643	RBM14-RBM4	100	60.822	MGP_CAROLIEiJ_G0022515	Rbm4b	99	62.295	Mus_caroli
ENSG00000248643	RBM14-RBM4	100	95.882	MGP_CAROLIEiJ_G0022514	-	100	95.882	Mus_caroli
ENSG00000248643	RBM14-RBM4	99	97.436	ENSMUSG00000096370	Gm21992	100	95.882	Mus_musculus
ENSG00000248643	RBM14-RBM4	100	68.852	ENSMUSG00000094936	Rbm4	99	71.311	Mus_musculus
ENSG00000248643	RBM14-RBM4	100	60.548	ENSMUSG00000033760	Rbm4b	99	62.022	Mus_musculus
ENSG00000248643	RBM14-RBM4	100	96.176	MGP_PahariEiJ_G0014011	-	100	96.176	Mus_pahari
ENSG00000248643	RBM14-RBM4	100	69.126	MGP_PahariEiJ_G0014013	-	99	71.311	Mus_pahari
ENSG00000248643	RBM14-RBM4	100	60.274	MGP_PahariEiJ_G0014012	Rbm4b	99	61.749	Mus_pahari
ENSG00000248643	RBM14-RBM4	77	69.018	MGP_SPRETEiJ_G0023430	-	99	71.779	Mus_spretus
ENSG00000248643	RBM14-RBM4	100	96.176	MGP_SPRETEiJ_G0023428	-	100	96.176	Mus_spretus
ENSG00000248643	RBM14-RBM4	77	67.972	MGP_SPRETEiJ_G0023429	-	99	69.858	Mus_spretus
ENSG00000248643	RBM14-RBM4	100	73.770	ENSMPUG00000003443	RBM4	99	72.951	Mustela_putorius_furo
ENSG00000248643	RBM14-RBM4	100	64.384	ENSMPUG00000003450	RBM4B	99	64.481	Mustela_putorius_furo
ENSG00000248643	RBM14-RBM4	99	71.901	ENSMLUG00000004076	RBM4	95	71.901	Myotis_lucifugus
ENSG00000248643	RBM14-RBM4	100	61.644	ENSMLUG00000001290	RBM4B	99	62.022	Myotis_lucifugus
ENSG00000248643	RBM14-RBM4	100	61.749	ENSNGAG00000016292	Rbm4b	99	61.749	Nannospalax_galili
ENSG00000248643	RBM14-RBM4	100	74.795	ENSNLEG00000035021	RBM4	99	74.795	Nomascus_leucogenys
ENSG00000248643	RBM14-RBM4	100	62.740	ENSNLEG00000006213	RBM4B	99	62.842	Nomascus_leucogenys
ENSG00000248643	RBM14-RBM4	67	86.344	ENSMEUG00000005739	-	100	86.404	Notamacropus_eugenii
ENSG00000248643	RBM14-RBM4	100	64.384	ENSMEUG00000001445	-	99	64.754	Notamacropus_eugenii
ENSG00000248643	RBM14-RBM4	100	63.562	ENSOPRG00000009158	RBM4B	99	64.208	Ochotona_princeps
ENSG00000248643	RBM14-RBM4	100	73.224	ENSOPRG00000009149	RBM4	99	72.951	Ochotona_princeps
ENSG00000248643	RBM14-RBM4	95	30.357	ENSODEG00000006635	-	74	30.357	Octodon_degus
ENSG00000248643	RBM14-RBM4	95	41.935	ENSODEG00000020039	-	99	40.179	Octodon_degus
ENSG00000248643	RBM14-RBM4	100	63.288	ENSODEG00000017696	-	99	63.388	Octodon_degus
ENSG00000248643	RBM14-RBM4	100	56.712	ENSODEG00000001866	-	99	57.260	Octodon_degus
ENSG00000248643	RBM14-RBM4	95	41.071	ENSODEG00000019143	-	99	41.071	Octodon_degus
ENSG00000248643	RBM14-RBM4	100	54.247	ENSOANG00000003143	-	84	53.151	Ornithorhynchus_anatinus
ENSG00000248643	RBM14-RBM4	100	61.096	ENSOANG00000011036	-	99	60.822	Ornithorhynchus_anatinus
ENSG00000248643	RBM14-RBM4	100	74.317	ENSOCUG00000004731	RBM4	99	73.497	Oryctolagus_cuniculus
ENSG00000248643	RBM14-RBM4	100	63.836	ENSOCUG00000006695	LARK	99	63.934	Oryctolagus_cuniculus
ENSG00000248643	RBM14-RBM4	100	63.836	ENSOGAG00000015648	RBM4B	99	63.934	Otolemur_garnettii
ENSG00000248643	RBM14-RBM4	100	74.317	ENSOGAG00000015647	RBM4	99	73.497	Otolemur_garnettii
ENSG00000248643	RBM14-RBM4	100	68.219	ENSOARG00000007700	RBM4	99	68.767	Ovis_aries
ENSG00000248643	RBM14-RBM4	100	64.110	ENSOARG00000007759	RBM4B	99	64.481	Ovis_aries
ENSG00000248643	RBM14-RBM4	100	63.562	ENSPPAG00000015125	RBM4B	99	63.661	Pan_paniscus
ENSG00000248643	RBM14-RBM4	100	62.740	ENSPPRG00000003388	RBM4B	99	64.208	Panthera_pardus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSPPRG00000003533	RBM4	99	73.224	Panthera_pardus
ENSG00000248643	RBM14-RBM4	100	62.740	ENSPTIG00000015426	RBM4B	99	64.208	Panthera_tigris_altaica
ENSG00000248643	RBM14-RBM4	100	60.274	ENSPTIG00000016180	RBM4	99	60.274	Panthera_tigris_altaica
ENSG00000248643	RBM14-RBM4	100	63.562	ENSPTRG00000003935	RBM4B	99	63.661	Pan_troglodytes
ENSG00000248643	RBM14-RBM4	100	63.562	ENSPANG00000020672	RBM4B	99	63.661	Papio_anubis
ENSG00000248643	RBM14-RBM4	100	51.194	ENSPSIG00000003430	-	99	51.330	Pelodiscus_sinensis
ENSG00000248643	RBM14-RBM4	95	41.071	ENSPSIG00000003477	-	94	48.464	Pelodiscus_sinensis
ENSG00000248643	RBM14-RBM4	100	61.096	ENSPEMG00000009144	Rbm4b	99	62.568	Peromyscus_maniculatus_bairdii
ENSG00000248643	RBM14-RBM4	100	74.521	ENSPPYG00000003012	RBM4	100	74.521	Pongo_abelii
ENSG00000248643	RBM14-RBM4	100	63.562	ENSPPYG00000003010	RBM4B	99	63.661	Pongo_abelii
ENSG00000248643	RBM14-RBM4	100	72.131	ENSPCAG00000003393	-	99	71.585	Procavia_capensis
ENSG00000248643	RBM14-RBM4	100	63.836	ENSPCOG00000027885	RBM4B	99	63.934	Propithecus_coquereli
ENSG00000248643	RBM14-RBM4	100	73.224	ENSPVAG00000010486	RBM4	99	72.404	Pteropus_vampyrus
ENSG00000248643	RBM14-RBM4	100	64.110	ENSPVAG00000010487	RBM4B	99	64.208	Pteropus_vampyrus
ENSG00000248643	RBM14-RBM4	100	61.096	ENSRNOG00000061795	Rbm4b	99	62.568	Rattus_norvegicus
ENSG00000248643	RBM14-RBM4	100	71.858	ENSRNOG00000050741	Rbm4	99	72.131	Rattus_norvegicus
ENSG00000248643	RBM14-RBM4	100	63.562	ENSRBIG00000019394	RBM4B	99	63.661	Rhinopithecus_bieti
ENSG00000248643	RBM14-RBM4	100	63.562	ENSRROG00000032850	RBM4B	99	63.661	Rhinopithecus_roxellana
ENSG00000248643	RBM14-RBM4	95	41.071	ENSRROG00000032796	-	88	41.071	Rhinopithecus_roxellana
ENSG00000248643	RBM14-RBM4	100	63.288	ENSSBOG00000034474	RBM4B	99	63.388	Saimiri_boliviensis_boliviensis
ENSG00000248643	RBM14-RBM4	100	62.740	ENSSHAG00000008386	-	99	63.388	Sarcophilus_harrisii
ENSG00000248643	RBM14-RBM4	100	64.110	ENSSARG00000010710	RBM4B	99	64.208	Sorex_araneus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSSSCG00000032437	RBM4	99	73.224	Sus_scrofa
ENSG00000248643	RBM14-RBM4	95	42.857	ENSTGUG00000016779	-	93	48.805	Taeniopygia_guttata
ENSG00000248643	RBM14-RBM4	94	42.424	ENSTBEG00000003727	-	70	62.273	Tupaia_belangeri
ENSG00000248643	RBM14-RBM4	100	61.918	ENSTBEG00000003748	RBM4B	99	62.295	Tupaia_belangeri
ENSG00000248643	RBM14-RBM4	100	64.110	ENSTTRG00000011166	RBM4B	99	64.208	Tursiops_truncatus
ENSG00000248643	RBM14-RBM4	100	72.131	ENSTTRG00000011164	RBM4	99	71.311	Tursiops_truncatus
ENSG00000248643	RBM14-RBM4	100	74.044	ENSUAMG00000014882	RBM4	99	73.224	Ursus_americanus
ENSG00000248643	RBM14-RBM4	100	64.384	ENSUAMG00000004745	RBM4B	99	64.481	Ursus_americanus
ENSG00000248643	RBM14-RBM4	95	41.964	ENSUMAG00000011738	-	99	41.964	Ursus_maritimus
ENSG00000248643	RBM14-RBM4	100	63.836	ENSVPAG00000001950	RBM4B	99	63.934	Vicugna_pacos
ENSG00000248643	RBM14-RBM4	100	71.585	ENSVPAG00000001949	RBM4	99	69.945	Vicugna_pacos
ENSG00000248643	RBM14-RBM4	100	63.836	ENSVVUG00000010619	RBM4B	99	63.934	Vulpes_vulpes
ENSG00000248643	RBM14-RBM4	95	42.593	ENSVVUG00000011717	-	98	41.964	Vulpes_vulpes
ENSG00000248643	RBM14-RBM4	100	74.044	ENSVVUG00000010622	RBM4	99	73.224	Vulpes_vulpes