EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000250745 (Gene tree)
Gene ID: 100287441
Gene Symbol: USP17L20
Alias: -
Full Name: ubiquitin specific peptidase 17 like family member 20
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 1,952 bases
Position: chr4:9,258,124-9,260,075
Accession: 44448
RBP type: canonical RBP
Summary: USP17L20 (Ubiquitin Specific Peptidase 17 Like Family Member 20) is a Protein Coding gene. Among its related pathways are Deubiquitination and Metabolism of proteins. Gene Ontology (GO) annotations related to this gene include cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. An important paralog of this gene is USP17L24.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000427264	HABP4_PAI-RBP1	PF04774.15	0.00016	1	1
ENSP00000477832	HABP4_PAI-RBP1	PF04774.15	0.00017	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000506151	USP17L20-201	1593	-	ENSP00000427264	530 (aa)	-	D6RJB6
ENST00000613757	USP17L20-202	1677	-	ENSP00000477832	558 (aa)	-	A0A087WTF5

Gene Model

Click here to download ENSG00000250745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000250745's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000250745	USP17L20	74	96.818	ENSGGOG00000009925	-	94	96.818	Gorilla_gorilla
ENSG00000250745	USP17L20	100	88.302	ENSGGOG00000043616	-	100	88.302	Gorilla_gorilla
ENSG00000250745	USP17L20	78	95.673	ENSGGOG00000014367	-	100	95.673	Gorilla_gorilla
ENSG00000250745	USP17L20	100	95.283	ENSGGOG00000042639	-	100	95.283	Gorilla_gorilla
ENSG00000250745	USP17L20	100	95.849	ENSGGOG00000044031	-	100	95.849	Gorilla_gorilla
ENSG00000250745	USP17L20	100	88.491	ENSMFAG00000043645	-	99	87.276	Macaca_fascicularis
ENSG00000250745	USP17L20	100	88.491	ENSMFAG00000036389	-	99	87.276	Macaca_fascicularis
ENSG00000250745	USP17L20	87	89.610	ENSMFAG00000039016	-	100	89.610	Macaca_fascicularis
ENSG00000250745	USP17L20	99	87.689	ENSMMUG00000045288	-	100	85.663	Macaca_mulatta
ENSG00000250745	USP17L20	100	82.075	ENSMMUG00000044213	-	100	82.075	Macaca_mulatta
ENSG00000250745	USP17L20	100	83.396	ENSMMUG00000042380	-	100	81.900	Macaca_mulatta
ENSG00000250745	USP17L20	100	85.472	ENSMMUG00000039802	-	100	85.472	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.113	ENSMMUG00000042715	-	100	88.113	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.302	ENSMMUG00000029040	-	100	86.559	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.302	ENSMMUG00000049137	-	100	88.302	Macaca_mulatta
ENSG00000250745	USP17L20	100	87.170	ENSMMUG00000047519	-	100	87.170	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.302	ENSMMUG00000040484	-	100	88.302	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.113	ENSMMUG00000049096	-	100	86.380	Macaca_mulatta
ENSG00000250745	USP17L20	100	87.736	ENSMMUG00000041878	-	100	87.736	Macaca_mulatta
ENSG00000250745	USP17L20	100	88.113	ENSMMUG00000041488	-	100	88.113	Macaca_mulatta
ENSG00000250745	USP17L20	99	80.114	ENSMNEG00000033266	-	100	78.495	Macaca_nemestrina
ENSG00000250745	USP17L20	100	77.674	ENSMLEG00000029099	-	100	77.674	Mandrillus_leucophaeus
ENSG00000250745	USP17L20	100	92.642	ENSNLEG00000035477	-	100	92.642	Nomascus_leucogenys
ENSG00000250745	USP17L20	100	85.660	ENSPTRG00000049794	-	100	85.660	Pan_troglodytes
ENSG00000250745	USP17L20	87	81.529	ENSPANG00000034816	-	98	81.529	Papio_anubis
ENSG00000250745	USP17L20	100	87.358	ENSPANG00000035655	-	100	87.358	Papio_anubis
ENSG00000250745	USP17L20	100	87.736	ENSPANG00000031953	-	100	87.736	Papio_anubis
ENSG00000250745	USP17L20	100	87.358	ENSPANG00000032302	-	100	87.358	Papio_anubis
ENSG00000250745	USP17L20	100	87.736	ENSPANG00000029674	-	100	87.736	Papio_anubis
ENSG00000250745	USP17L20	100	89.841	ENSPANG00000035429	-	100	89.841	Papio_anubis
ENSG00000250745	USP17L20	89	87.764	ENSPANG00000032780	-	100	87.764	Papio_anubis
ENSG00000250745	USP17L20	100	86.981	ENSPANG00000029660	-	100	86.981	Papio_anubis
ENSG00000250745	USP17L20	100	86.038	ENSRROG00000032242	-	99	85.125	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0042981	regulation of apoptotic process	21873635.	IBA	Process