EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000250844 (Gene tree)
Gene ID: 100287364
Gene Symbol: USP17L18
Alias: -
Full Name: ubiquitin specific peptidase 17 like family member 18
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 1,952 bases
Position: chr4:9,248,630-9,250,581
Accession: 44446
RBP type: canonical RBP
Summary: USP17L18 (Ubiquitin Specific Peptidase 17 Like Family Member 18) is a Protein Coding gene. Among its related pathways are Deubiquitination and Metabolism of proteins. Gene Ontology (GO) annotations related to this gene include cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. An important paralog of this gene is USP17L27.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000423503	HABP4_PAI-RBP1	PF04774.15	0.00013	1	1
ENSP00000477751	HABP4_PAI-RBP1	PF04774.15	0.00014	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000619296	USP17L18-202	1677	-	ENSP00000477751	558 (aa)	-	A0A087WTC1
ENST00000504209	USP17L18-201	1593	-	ENSP00000423503	530 (aa)	-	D6R9N7

Gene Model

Click here to download ENSG00000250844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000250844's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000250844	USP17L18	100	88.113	ENSGGOG00000043616	-	100	88.113	Gorilla_gorilla
ENSG00000250844	USP17L18	100	95.660	ENSGGOG00000044031	-	100	95.660	Gorilla_gorilla
ENSG00000250844	USP17L18	74	96.364	ENSGGOG00000009925	-	94	96.364	Gorilla_gorilla
ENSG00000250844	USP17L18	100	95.094	ENSGGOG00000042639	-	100	95.094	Gorilla_gorilla
ENSG00000250844	USP17L18	78	95.433	ENSGGOG00000014367	-	100	95.433	Gorilla_gorilla
ENSG00000250844	USP17L18	100	88.302	ENSMFAG00000043645	-	99	87.097	Macaca_fascicularis
ENSG00000250844	USP17L18	100	88.302	ENSMFAG00000036389	-	99	87.097	Macaca_fascicularis
ENSG00000250844	USP17L18	87	89.394	ENSMFAG00000039016	-	100	89.394	Macaca_fascicularis
ENSG00000250844	USP17L18	100	87.925	ENSMMUG00000041488	-	100	87.925	Macaca_mulatta
ENSG00000250844	USP17L18	100	88.113	ENSMMUG00000029040	-	100	86.380	Macaca_mulatta
ENSG00000250844	USP17L18	100	87.925	ENSMMUG00000049096	-	100	86.201	Macaca_mulatta
ENSG00000250844	USP17L18	99	87.500	ENSMMUG00000045288	-	100	85.484	Macaca_mulatta
ENSG00000250844	USP17L18	100	86.981	ENSMMUG00000047519	-	100	86.981	Macaca_mulatta
ENSG00000250844	USP17L18	100	87.925	ENSMMUG00000042715	-	100	87.925	Macaca_mulatta
ENSG00000250844	USP17L18	100	81.887	ENSMMUG00000044213	-	100	81.887	Macaca_mulatta
ENSG00000250844	USP17L18	100	88.113	ENSMMUG00000040484	-	100	88.113	Macaca_mulatta
ENSG00000250844	USP17L18	100	83.208	ENSMMUG00000042380	-	100	81.720	Macaca_mulatta
ENSG00000250844	USP17L18	100	88.113	ENSMMUG00000049137	-	100	88.113	Macaca_mulatta
ENSG00000250844	USP17L18	100	85.283	ENSMMUG00000039802	-	100	85.283	Macaca_mulatta
ENSG00000250844	USP17L18	100	87.547	ENSMMUG00000041878	-	100	87.547	Macaca_mulatta
ENSG00000250844	USP17L18	99	80.114	ENSMNEG00000033266	-	100	78.495	Macaca_nemestrina
ENSG00000250844	USP17L18	100	77.674	ENSMLEG00000029099	-	100	77.674	Mandrillus_leucophaeus
ENSG00000250844	USP17L18	100	92.453	ENSNLEG00000035477	-	100	92.453	Nomascus_leucogenys
ENSG00000250844	USP17L18	100	85.472	ENSPTRG00000049794	-	100	85.472	Pan_troglodytes
ENSG00000250844	USP17L18	100	87.170	ENSPANG00000035655	-	100	87.170	Papio_anubis
ENSG00000250844	USP17L18	100	87.170	ENSPANG00000032302	-	100	87.170	Papio_anubis
ENSG00000250844	USP17L18	100	87.547	ENSPANG00000029674	-	100	87.547	Papio_anubis
ENSG00000250844	USP17L18	89	87.553	ENSPANG00000032780	-	100	87.553	Papio_anubis
ENSG00000250844	USP17L18	100	86.792	ENSPANG00000029660	-	100	86.792	Papio_anubis
ENSG00000250844	USP17L18	87	81.529	ENSPANG00000034816	-	98	81.529	Papio_anubis
ENSG00000250844	USP17L18	100	89.841	ENSPANG00000035429	-	100	89.841	Papio_anubis
ENSG00000250844	USP17L18	100	87.547	ENSPANG00000031953	-	100	87.547	Papio_anubis
ENSG00000250844	USP17L18	100	85.849	ENSRROG00000032242	-	99	84.946	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0042981	regulation of apoptotic process	21873635.	IBA	Process