EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000255561 (Gene tree)
Gene ID: 91893
Gene Symbol: FDXACB1
Alias: LOC91893|hCG_2033039
Full Name: ferredoxin-fold anticodon binding domain containing 1
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 7,188 bases
Position: chr11:111,874,056-111,881,243
Accession: 25110
RBP type: canonical RBP
Summary: This gene encodes a protein which contains a ferredoxin-fold anticodon-binding domain which is contained in a subset of phenylalanyl tRNA synthetases. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000260257	FDX-ACB	PF03147.14	4.2e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000528274	FDXACB1-202	1611	-	ENSP00000435572	396 (aa)	-	B3KUL3
ENST00000260257	FDXACB1-201	2789	-	ENSP00000260257	624 (aa)	-	Q9BRP7
ENST00000531487	FDXACB1-203	2206	-	ENSP00000431629	105 (aa)	-	E9PK62

Gene Model

Click here to download ENSG00000255561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000255561's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000255561	FDXACB1	100	35.268	ENSAPOG00000009726	fdxacb1	100	35.268	Acanthochromis_polyacanthus
ENSG00000255561	FDXACB1	100	35.268	ENSAPOG00000009041	FDXACB1	100	35.268	Acanthochromis_polyacanthus
ENSG00000255561	FDXACB1	99	36.236	ENSACIG00000004208	fdxacb1	98	36.349	Amphilophus_citrinellus
ENSG00000255561	FDXACB1	100	35.714	ENSAOCG00000007455	fdxacb1	100	35.714	Amphiprion_ocellaris
ENSG00000255561	FDXACB1	100	35.417	ENSAPEG00000023857	fdxacb1	100	35.417	Amphiprion_percula
ENSG00000255561	FDXACB1	99	34.564	ENSATEG00000020757	fdxacb1	98	34.757	Anabas_testudineus
ENSG00000255561	FDXACB1	100	47.528	ENSAPLG00000004681	FDXACB1	99	47.528	Anas_platyrhynchos
ENSG00000255561	FDXACB1	100	93.429	ENSANAG00000022744	FDXACB1	100	93.429	Aotus_nancymaae
ENSG00000255561	FDXACB1	100	35.513	ENSACLG00000027415	-	100	35.513	Astatotilapia_calliptera
ENSG00000255561	FDXACB1	100	35.513	ENSACLG00000020497	fdxacb1	100	35.513	Astatotilapia_calliptera
ENSG00000255561	FDXACB1	98	41.977	ENSAMXG00000038372	fdxacb1	99	41.680	Astyanax_mexicanus
ENSG00000255561	FDXACB1	100	81.090	ENSBTAG00000004949	FDXACB1	100	81.090	Bos_taurus
ENSG00000255561	FDXACB1	100	92.308	ENSCJAG00000040413	FDXACB1	100	92.308	Callithrix_jacchus
ENSG00000255561	FDXACB1	100	83.333	ENSCAFG00020006314	FDXACB1	100	83.333	Canis_lupus_dingo
ENSG00000255561	FDXACB1	100	81.731	ENSCHIG00000017261	FDXACB1	100	81.731	Capra_hircus
ENSG00000255561	FDXACB1	100	85.577	ENSTSYG00000029218	FDXACB1	100	85.577	Carlito_syrichta
ENSG00000255561	FDXACB1	60	89.286	ENSCAPG00000010478	-	100	89.286	Cavia_aperea
ENSG00000255561	FDXACB1	100	76.923	ENSCPOG00000032584	FDXACB1	100	76.923	Cavia_porcellus
ENSG00000255561	FDXACB1	100	93.109	ENSCCAG00000024232	FDXACB1	100	93.109	Cebus_capucinus
ENSG00000255561	FDXACB1	100	94.872	ENSCATG00000035600	FDXACB1	100	94.872	Cercocebus_atys
ENSG00000255561	FDXACB1	100	79.487	ENSCLAG00000015613	FDXACB1	100	79.487	Chinchilla_lanigera
ENSG00000255561	FDXACB1	100	95.192	ENSCSAG00000002878	FDXACB1	100	95.192	Chlorocebus_sabaeus
ENSG00000255561	FDXACB1	99	80.192	ENSCHOG00000003037	FDXACB1	99	80.192	Choloepus_hoffmanni
ENSG00000255561	FDXACB1	100	52.665	ENSCPBG00000009087	FDXACB1	100	52.665	Chrysemys_picta_bellii
ENSG00000255561	FDXACB1	100	94.551	ENSCANG00000043844	FDXACB1	100	94.551	Colobus_angolensis_palliatus
ENSG00000255561	FDXACB1	100	74.199	ENSCGRG00001023825	Fdxacb1	98	74.199	Cricetulus_griseus_chok1gshd
ENSG00000255561	FDXACB1	100	74.199	ENSCGRG00000001752	Fdxacb1	98	74.199	Cricetulus_griseus_crigri
ENSG00000255561	FDXACB1	99	36.406	ENSCSEG00000006964	fdxacb1	99	36.406	Cynoglossus_semilaevis
ENSG00000255561	FDXACB1	100	35.768	ENSCVAG00000013005	fdxacb1	100	35.757	Cyprinodon_variegatus
ENSG00000255561	FDXACB1	99	41.297	ENSDARG00000095750	fdxacb1	99	41.297	Danio_rerio
ENSG00000255561	FDXACB1	100	79.426	ENSDNOG00000037748	FDXACB1	100	79.426	Dasypus_novemcinctus
ENSG00000255561	FDXACB1	100	77.316	ENSDORG00000028060	Fdxacb1	100	77.316	Dipodomys_ordii
ENSG00000255561	FDXACB1	100	76.800	ENSETEG00000004898	FDXACB1	99	76.800	Echinops_telfairi
ENSG00000255561	FDXACB1	100	85.897	ENSEASG00005007198	FDXACB1	100	85.897	Equus_asinus_asinus
ENSG00000255561	FDXACB1	100	85.897	ENSECAG00000009561	FDXACB1	100	85.897	Equus_caballus
ENSG00000255561	FDXACB1	84	80.734	ENSEEUG00000009839	FDXACB1	83	80.734	Erinaceus_europaeus
ENSG00000255561	FDXACB1	99	32.741	ENSELUG00000011250	fdxacb1	99	32.794	Esox_lucius
ENSG00000255561	FDXACB1	100	82.853	ENSFCAG00000024559	FDXACB1	100	82.853	Felis_catus
ENSG00000255561	FDXACB1	100	47.574	ENSFALG00000006177	FDXACB1	100	47.574	Ficedula_albicollis
ENSG00000255561	FDXACB1	100	79.167	ENSFDAG00000016115	FDXACB1	100	79.968	Fukomys_damarensis
ENSG00000255561	FDXACB1	100	34.873	ENSFHEG00000016602	fdxacb1	100	34.873	Fundulus_heteroclitus
ENSG00000255561	FDXACB1	100	47.975	ENSGALG00000007967	FDXACB1	100	47.975	Gallus_gallus
ENSG00000255561	FDXACB1	100	35.015	ENSGAFG00000001162	fdxacb1	95	35.015	Gambusia_affinis
ENSG00000255561	FDXACB1	99	37.224	ENSGACG00000020639	fdxacb1	98	37.224	Gasterosteus_aculeatus
ENSG00000255561	FDXACB1	99	52.747	ENSGAGG00000020645	FDXACB1	98	53.873	Gopherus_agassizii
ENSG00000255561	FDXACB1	100	98.558	ENSGGOG00000037643	FDXACB1	100	98.558	Gorilla_gorilla
ENSG00000255561	FDXACB1	100	35.364	ENSHBUG00000003489	fdxacb1	100	35.364	Haplochromis_burtoni
ENSG00000255561	FDXACB1	100	80.929	ENSHGLG00000004171	FDXACB1	100	80.929	Heterocephalus_glaber_female
ENSG00000255561	FDXACB1	100	80.929	ENSHGLG00100017458	FDXACB1	100	80.929	Heterocephalus_glaber_male
ENSG00000255561	FDXACB1	99	35.814	ENSHCOG00000018986	fdxacb1	99	35.814	Hippocampus_comes
ENSG00000255561	FDXACB1	99	39.587	ENSIPUG00000022559	FDXACB1	99	39.936	Ictalurus_punctatus
ENSG00000255561	FDXACB1	100	78.365	ENSJJAG00000010367	Fdxacb1	100	78.365	Jaculus_jaculus
ENSG00000255561	FDXACB1	100	35.881	ENSKMAG00000022235	fdxacb1	100	35.881	Kryptolebias_marmoratus
ENSG00000255561	FDXACB1	100	34.956	ENSLBEG00000016100	fdxacb1	100	34.956	Labrus_bergylta
ENSG00000255561	FDXACB1	88	52.381	ENSLACG00000018780	FDXACB1	99	52.381	Latimeria_chalumnae
ENSG00000255561	FDXACB1	100	80.990	ENSLAFG00000014650	FDXACB1	100	80.990	Loxodonta_africana
ENSG00000255561	FDXACB1	100	94.712	ENSMFAG00000002448	FDXACB1	100	94.712	Macaca_fascicularis
ENSG00000255561	FDXACB1	100	94.712	ENSMNEG00000041539	FDXACB1	100	94.712	Macaca_nemestrina
ENSG00000255561	FDXACB1	100	34.985	ENSMAMG00000018674	fdxacb1	99	35.174	Mastacembelus_armatus
ENSG00000255561	FDXACB1	100	35.513	ENSMZEG00005018799	fdxacb1	100	35.513	Maylandia_zebra
ENSG00000255561	FDXACB1	100	73.718	ENSMAUG00000019310	Fdxacb1	100	73.718	Mesocricetus_auratus
ENSG00000255561	FDXACB1	100	84.936	ENSMICG00000045510	FDXACB1	100	84.936	Microcebus_murinus
ENSG00000255561	FDXACB1	100	74.038	ENSMOCG00000011835	Fdxacb1	100	74.038	Microtus_ochrogaster
ENSG00000255561	FDXACB1	99	37.481	ENSMMOG00000018749	fdxacb1	99	37.481	Mola_mola
ENSG00000255561	FDXACB1	58	60.680	ENSMALG00000007153	fdxacb1	75	60.680	Monopterus_albus
ENSG00000255561	FDXACB1	100	72.115	MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	Mus_caroli
ENSG00000255561	FDXACB1	100	71.635	ENSMUSG00000037845	Fdxacb1	100	71.635	Mus_musculus
ENSG00000255561	FDXACB1	100	72.596	MGP_PahariEiJ_G0015065	Fdxacb1	100	72.596	Mus_pahari
ENSG00000255561	FDXACB1	100	71.635	MGP_SPRETEiJ_G0033336	Fdxacb1	100	71.635	Mus_spretus
ENSG00000255561	FDXACB1	100	82.051	ENSMPUG00000003585	FDXACB1	100	82.051	Mustela_putorius_furo
ENSG00000255561	FDXACB1	100	82.240	ENSMLUG00000014872	FDXACB1	100	82.240	Myotis_lucifugus
ENSG00000255561	FDXACB1	100	77.724	ENSNGAG00000014606	Fdxacb1	100	77.724	Nannospalax_galili
ENSG00000255561	FDXACB1	100	36.767	ENSNBRG00000006939	fdxacb1	100	36.767	Neolamprologus_brichardi
ENSG00000255561	FDXACB1	100	96.314	ENSNLEG00000030387	FDXACB1	100	96.314	Nomascus_leucogenys
ENSG00000255561	FDXACB1	100	65.280	ENSMEUG00000003077	FDXACB1	99	65.280	Notamacropus_eugenii
ENSG00000255561	FDXACB1	100	72.320	ENSOPRG00000012593	FDXACB1	99	72.320	Ochotona_princeps
ENSG00000255561	FDXACB1	100	79.808	ENSODEG00000010360	FDXACB1	100	79.808	Octodon_degus
ENSG00000255561	FDXACB1	100	36.801	ENSONIG00000004939	fdxacb1	100	36.801	Oreochromis_niloticus
ENSG00000255561	FDXACB1	99	51.685	ENSOANG00000003844	-	99	51.685	Ornithorhynchus_anatinus
ENSG00000255561	FDXACB1	62	43.813	ENSORLG00020008420	fdxacb1	72	43.813	Oryzias_latipes_hni
ENSG00000255561	FDXACB1	99	36.280	ENSOMEG00000019353	fdxacb1	99	36.280	Oryzias_melastigma
ENSG00000255561	FDXACB1	100	81.250	ENSOARG00000015064	FDXACB1	99	81.250	Ovis_aries
ENSG00000255561	FDXACB1	100	99.038	ENSPPAG00000030196	FDXACB1	100	99.038	Pan_paniscus
ENSG00000255561	FDXACB1	100	82.692	ENSPPRG00000005967	FDXACB1	100	82.692	Panthera_pardus
ENSG00000255561	FDXACB1	100	82.532	ENSPTIG00000016420	FDXACB1	100	82.532	Panthera_tigris_altaica
ENSG00000255561	FDXACB1	100	99.038	ENSPTRG00000004272	FDXACB1	100	99.038	Pan_troglodytes
ENSG00000255561	FDXACB1	100	94.391	ENSPANG00000019268	FDXACB1	100	94.391	Papio_anubis
ENSG00000255561	FDXACB1	97	40.722	ENSPKIG00000009407	fdxacb1	99	40.320	Paramormyrops_kingsleyae
ENSG00000255561	FDXACB1	67	46.465	ENSPMGG00000004912	fdxacb1	100	34.043	Periophthalmus_magnuspinnatus
ENSG00000255561	FDXACB1	100	75.641	ENSPEMG00000020188	Fdxacb1	100	75.641	Peromyscus_maniculatus_bairdii
ENSG00000255561	FDXACB1	100	35.127	ENSPFOG00000022156	fdxacb1	100	35.127	Poecilia_formosa
ENSG00000255561	FDXACB1	100	35.127	ENSPLAG00000019966	fdxacb1	100	35.127	Poecilia_latipinna
ENSG00000255561	FDXACB1	100	35.532	ENSPMEG00000002110	fdxacb1	100	35.532	Poecilia_mexicana
ENSG00000255561	FDXACB1	100	34.963	ENSPREG00000017453	fdxacb1	100	34.963	Poecilia_reticulata
ENSG00000255561	FDXACB1	100	96.635	ENSPPYG00000003866	FDXACB1	99	96.635	Pongo_abelii
ENSG00000255561	FDXACB1	100	77.760	ENSPCAG00000000333	FDXACB1	99	77.760	Procavia_capensis
ENSG00000255561	FDXACB1	100	84.776	ENSPCOG00000027443	FDXACB1	100	84.776	Propithecus_coquereli
ENSG00000255561	FDXACB1	100	82.853	ENSPVAG00000009610	FDXACB1	99	82.853	Pteropus_vampyrus
ENSG00000255561	FDXACB1	100	35.364	ENSPNYG00000012981	fdxacb1	100	35.364	Pundamilia_nyererei
ENSG00000255561	FDXACB1	97	42.857	ENSPNAG00000003284	fdxacb1	99	42.540	Pygocentrus_nattereri
ENSG00000255561	FDXACB1	90	70.796	ENSRNOG00000010743	Fdxacb1	97	70.796	Rattus_norvegicus
ENSG00000255561	FDXACB1	100	94.712	ENSRBIG00000014195	FDXACB1	100	94.712	Rhinopithecus_bieti
ENSG00000255561	FDXACB1	100	94.551	ENSRROG00000045453	FDXACB1	100	94.551	Rhinopithecus_roxellana
ENSG00000255561	FDXACB1	100	93.429	ENSSBOG00000027732	FDXACB1	100	93.429	Saimiri_boliviensis_boliviensis
ENSG00000255561	FDXACB1	99	39.807	ENSSFOG00015009862	fdxacb1	99	39.807	Scleropages_formosus
ENSG00000255561	FDXACB1	100	34.273	ENSSMAG00000010250	fdxacb1	100	34.273	Scophthalmus_maximus
ENSG00000255561	FDXACB1	99	35.641	ENSSDUG00000004461	fdxacb1	99	35.641	Seriola_dumerili
ENSG00000255561	FDXACB1	99	35.182	ENSSLDG00000017388	fdxacb1	99	35.182	Seriola_lalandi_dorsalis
ENSG00000255561	FDXACB1	100	75.801	ENSSARG00000002541	FDXACB1	99	75.801	Sorex_araneus
ENSG00000255561	FDXACB1	99	48.050	ENSSPUG00000010598	FDXACB1	99	48.050	Sphenodon_punctatus
ENSG00000255561	FDXACB1	99	36.432	ENSSPAG00000007903	fdxacb1	99	36.432	Stegastes_partitus
ENSG00000255561	FDXACB1	100	82.240	ENSSSCG00000021871	FDXACB1	100	82.240	Sus_scrofa
ENSG00000255561	FDXACB1	99	49.758	ENSTGUG00000000326	FDXACB1	99	49.758	Taeniopygia_guttata
ENSG00000255561	FDXACB1	99	38.231	ENSTRUG00000017134	fdxacb1	99	38.231	Takifugu_rubripes
ENSG00000255561	FDXACB1	99	37.660	ENSTNIG00000009977	fdxacb1	99	37.660	Tetraodon_nigroviridis
ENSG00000255561	FDXACB1	100	80.769	ENSTBEG00000010204	FDXACB1	99	80.769	Tupaia_belangeri
ENSG00000255561	FDXACB1	100	85.256	ENSTTRG00000010496	FDXACB1	99	85.256	Tursiops_truncatus
ENSG00000255561	FDXACB1	100	84.776	ENSUAMG00000018595	FDXACB1	100	84.776	Ursus_americanus
ENSG00000255561	FDXACB1	100	84.936	ENSUMAG00000006940	FDXACB1	100	84.936	Ursus_maritimus
ENSG00000255561	FDXACB1	89	82.407	ENSVPAG00000000044	FDXACB1	89	82.407	Vicugna_pacos
ENSG00000255561	FDXACB1	100	82.853	ENSVVUG00000015845	FDXACB1	100	82.853	Vulpes_vulpes
ENSG00000255561	FDXACB1	99	41.074	ENSXETG00000010172	fdxacb1	99	41.074	Xenopus_tropicalis
ENSG00000255561	FDXACB1	100	36.957	ENSXCOG00000007930	fdxacb1	93	49.077	Xiphophorus_couchianus
ENSG00000255561	FDXACB1	100	35.863	ENSXMAG00000010929	fdxacb1	100	35.863	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	25416956.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	21873635.	IBA	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process