EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSG00000261796 (Gene tree)
Gene ID: 100534599
Gene Symbol: ISY1-RAB43
Alias: -
Full Name: ISY1-RAB43 readthrough
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 73,662 bases
Position: chr3:129,087,569-129,161,230
Accession: 42969
RBP type: canonical RBP
Summary: This locus represents naturally occurring read-through transcription between the neighboring ISY1 (ISY1 splicing factor homolog) and RAB43 (RAB43, member RAS oncogene family) gene on chromosome 3. The read-through transcript encodes a protein that shares sequence identity with the upstream gene product, but its C-terminus is distinct due to a frameshift relative to the downstream gene. [provided by RefSeq, Mar 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000411822	Isy1	PF06246.12	7.2e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000418265	ISY1-RAB43-201	4868	-	ENSP00000411822	331 (aa)	-	UPI00005A60DB

Gene Model

Click here to download ENSG00000261796's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000261796's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000261796	ISY1-RAB43	99	95.455	ENSAMEG00000015341	-	100	95.455	Ailuropoda_melanoleuca
ENSG00000261796	ISY1-RAB43	56	88.587	ENSACIG00000014723	isy1	74	88.587	Amphilophus_citrinellus
ENSG00000261796	ISY1-RAB43	86	77.622	ENSAOCG00000007147	isy1	100	76.923	Amphiprion_ocellaris
ENSG00000261796	ISY1-RAB43	86	69.279	ENSAPEG00000021883	isy1	99	68.868	Amphiprion_percula
ENSG00000261796	ISY1-RAB43	62	74.510	ENSATEG00000009521	isy1	84	74.510	Anabas_testudineus
ENSG00000261796	ISY1-RAB43	86	75.610	ENSAPLG00000014136	-	99	75.610	Anas_platyrhynchos
ENSG00000261796	ISY1-RAB43	78	87.645	ENSACAG00000013166	-	99	87.259	Anolis_carolinensis
ENSG00000261796	ISY1-RAB43	86	98.944	ENSANAG00000027120	-	99	98.944	Aotus_nancymaae
ENSG00000261796	ISY1-RAB43	86	71.831	ENSACLG00000014430	isy1	99	71.831	Astatotilapia_calliptera
ENSG00000261796	ISY1-RAB43	86	83.217	ENSAMXG00000005423	isy1	100	83.217	Astyanax_mexicanus
ENSG00000261796	ISY1-RAB43	86	94.386	ENSBTAG00000030915	ISY1	100	94.737	Bos_taurus
ENSG00000261796	ISY1-RAB43	81	49.632	WBGene00009966	isy-1	99	49.632	Caenorhabditis_elegans
ENSG00000261796	ISY1-RAB43	86	98.944	ENSCJAG00000017419	-	99	98.944	Callithrix_jacchus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSCAFG00000004333	ISY1	99	98.239	Canis_familiaris
ENSG00000261796	ISY1-RAB43	86	98.239	ENSCAFG00020004867	-	99	98.239	Canis_lupus_dingo
ENSG00000261796	ISY1-RAB43	86	94.386	ENSCHIG00000008237	-	100	94.737	Capra_hircus
ENSG00000261796	ISY1-RAB43	86	98.944	ENSTSYG00000013897	-	99	98.944	Carlito_syrichta
ENSG00000261796	ISY1-RAB43	84	72.662	ENSCAPG00000016359	-	99	72.662	Cavia_aperea
ENSG00000261796	ISY1-RAB43	86	98.592	ENSCPOG00000014735	-	99	98.592	Cavia_porcellus
ENSG00000261796	ISY1-RAB43	86	99.296	ENSCCAG00000028517	-	99	99.296	Cebus_capucinus
ENSG00000261796	ISY1-RAB43	86	99.648	ENSCATG00000030672	-	99	99.648	Cercocebus_atys
ENSG00000261796	ISY1-RAB43	86	98.246	ENSCLAG00000007518	-	99	98.246	Chinchilla_lanigera
ENSG00000261796	ISY1-RAB43	86	99.648	ENSCSAG00000008798	-	99	99.648	Chlorocebus_sabaeus
ENSG00000261796	ISY1-RAB43	86	89.123	ENSCPBG00000026346	-	100	88.772	Chrysemys_picta_bellii
ENSG00000261796	ISY1-RAB43	86	65.035	ENSCING00000000716	-	99	63.636	Ciona_intestinalis
ENSG00000261796	ISY1-RAB43	86	64.912	ENSCSAVG00000008992	-	100	63.793	Ciona_savignyi
ENSG00000261796	ISY1-RAB43	86	99.648	ENSCANG00000037761	-	99	99.648	Colobus_angolensis_palliatus
ENSG00000261796	ISY1-RAB43	86	97.535	ENSCGRG00001003415	Isy1	99	97.535	Cricetulus_griseus_chok1gshd
ENSG00000261796	ISY1-RAB43	86	97.535	ENSCGRG00000011641	Isy1	99	97.535	Cricetulus_griseus_crigri
ENSG00000261796	ISY1-RAB43	76	71.654	ENSCSEG00000020382	isy1	95	71.713	Cynoglossus_semilaevis
ENSG00000261796	ISY1-RAB43	86	77.622	ENSCVAG00000000650	isy1	100	77.622	Cyprinodon_variegatus
ENSG00000261796	ISY1-RAB43	86	81.818	ENSDARG00000063466	isy1	100	81.818	Danio_rerio
ENSG00000261796	ISY1-RAB43	86	96.491	ENSDNOG00000002763	-	99	96.491	Dasypus_novemcinctus
ENSG00000261796	ISY1-RAB43	83	97.826	ENSDORG00000006886	Isy1	99	97.826	Dipodomys_ordii
ENSG00000261796	ISY1-RAB43	82	60.727	FBgn0037550	CG9667	99	60.727	Drosophila_melanogaster
ENSG00000261796	ISY1-RAB43	83	96.350	ENSETEG00000017009	-	100	96.350	Echinops_telfairi
ENSG00000261796	ISY1-RAB43	83	94.565	ENSEASG00005015810	-	97	94.565	Equus_asinus_asinus
ENSG00000261796	ISY1-RAB43	81	98.881	ENSECAG00000013768	-	88	98.881	Equus_caballus
ENSG00000261796	ISY1-RAB43	86	83.972	ENSELUG00000000489	isy1	100	84.321	Esox_lucius
ENSG00000261796	ISY1-RAB43	86	98.239	ENSFCAG00000008664	-	99	98.239	Felis_catus
ENSG00000261796	ISY1-RAB43	86	82.042	ENSFALG00000014998	-	99	82.042	Ficedula_albicollis
ENSG00000261796	ISY1-RAB43	86	87.719	ENSFALG00000000023	-	100	87.719	Ficedula_albicollis
ENSG00000261796	ISY1-RAB43	83	97.834	ENSFDAG00000012661	-	94	97.834	Fukomys_damarensis
ENSG00000261796	ISY1-RAB43	86	76.573	ENSFHEG00000006776	isy1	100	77.622	Fundulus_heteroclitus
ENSG00000261796	ISY1-RAB43	65	80.000	ENSGMOG00000005635	isy1	74	80.000	Gadus_morhua
ENSG00000261796	ISY1-RAB43	86	88.421	ENSGALG00000005012	-	100	88.421	Gallus_gallus
ENSG00000261796	ISY1-RAB43	84	75.532	ENSGAFG00000019550	isy1	99	75.177	Gambusia_affinis
ENSG00000261796	ISY1-RAB43	86	76.491	ENSGACG00000003342	isy1	100	77.544	Gasterosteus_aculeatus
ENSG00000261796	ISY1-RAB43	83	87.319	ENSGAGG00000021274	-	97	86.873	Gopherus_agassizii
ENSG00000261796	ISY1-RAB43	86	100.000	ENSGGOG00000038733	ISY1	99	100.000	Gorilla_gorilla
ENSG00000261796	ISY1-RAB43	89	76.190	ENSHGLG00000017889	-	79	79.715	Heterocephalus_glaber_female
ENSG00000261796	ISY1-RAB43	86	97.887	ENSHGLG00000002576	-	99	97.887	Heterocephalus_glaber_female
ENSG00000261796	ISY1-RAB43	89	76.190	ENSHGLG00100005531	-	79	79.715	Heterocephalus_glaber_male
ENSG00000261796	ISY1-RAB43	85	95.789	ENSHGLG00100004254	-	99	95.789	Heterocephalus_glaber_male
ENSG00000261796	ISY1-RAB43	86	73.684	ENSHCOG00000014775	isy1	99	73.684	Hippocampus_comes
ENSG00000261796	ISY1-RAB43	86	83.158	ENSIPUG00000011379	Isy1	100	83.158	Ictalurus_punctatus
ENSG00000261796	ISY1-RAB43	85	97.535	ENSSTOG00000024769	-	99	97.535	Ictidomys_tridecemlineatus
ENSG00000261796	ISY1-RAB43	67	96.861	ENSJJAG00000009635	Isy1	96	96.861	Jaculus_jaculus
ENSG00000261796	ISY1-RAB43	86	87.018	ENSLACG00000004490	isy1	100	86.667	Latimeria_chalumnae
ENSG00000261796	ISY1-RAB43	86	84.615	ENSLOCG00000013988	isy1	100	84.615	Lepisosteus_oculatus
ENSG00000261796	ISY1-RAB43	85	87.279	ENSLAFG00000004015	-	99	87.279	Loxodonta_africana
ENSG00000261796	ISY1-RAB43	86	99.648	ENSMFAG00000037074	-	99	99.648	Macaca_fascicularis
ENSG00000261796	ISY1-RAB43	100	98.792	ENSMMUG00000011580	ISY1-RAB43	100	98.792	Macaca_mulatta
ENSG00000261796	ISY1-RAB43	85	92.226	ENSMNEG00000043206	ISY1	99	92.226	Macaca_nemestrina
ENSG00000261796	ISY1-RAB43	86	99.648	ENSMLEG00000033836	-	99	99.648	Mandrillus_leucophaeus
ENSG00000261796	ISY1-RAB43	86	79.298	ENSMAMG00000009501	isy1	100	78.596	Mastacembelus_armatus
ENSG00000261796	ISY1-RAB43	86	78.596	ENSMZEG00005012021	isy1	100	78.596	Maylandia_zebra
ENSG00000261796	ISY1-RAB43	86	87.368	ENSMGAG00000005181	-	99	87.719	Meleagris_gallopavo
ENSG00000261796	ISY1-RAB43	86	97.535	ENSMAUG00000008793	Isy1	99	97.535	Mesocricetus_auratus
ENSG00000261796	ISY1-RAB43	83	94.909	ENSMICG00000037547	-	99	94.909	Microcebus_murinus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSMOCG00000000472	Isy1	99	98.239	Microtus_ochrogaster
ENSG00000261796	ISY1-RAB43	86	70.790	ENSMMOG00000017810	isy1	99	70.790	Mola_mola
ENSG00000261796	ISY1-RAB43	86	90.845	ENSMODG00000008387	-	99	90.493	Monodelphis_domestica
ENSG00000261796	ISY1-RAB43	86	79.021	ENSMALG00000020650	isy1	100	78.322	Monopterus_albus
ENSG00000261796	ISY1-RAB43	86	98.239	MGP_CAROLIEiJ_G0028619	Isy1	99	98.239	Mus_caroli
ENSG00000261796	ISY1-RAB43	86	98.239	ENSMUSG00000030056	Isy1	99	98.239	Mus_musculus
ENSG00000261796	ISY1-RAB43	86	85.614	MGP_PahariEiJ_G0022357	Isy1	99	85.614	Mus_pahari
ENSG00000261796	ISY1-RAB43	86	98.239	MGP_SPRETEiJ_G0029631	Isy1	99	98.239	Mus_spretus
ENSG00000261796	ISY1-RAB43	86	88.380	ENSMPUG00000017307	-	95	88.380	Mustela_putorius_furo
ENSG00000261796	ISY1-RAB43	85	92.933	ENSMLUG00000011804	-	99	92.933	Myotis_lucifugus
ENSG00000261796	ISY1-RAB43	86	98.592	ENSNGAG00000015207	Isy1	99	98.592	Nannospalax_galili
ENSG00000261796	ISY1-RAB43	54	85.556	ENSNBRG00000006974	isy1	75	85.556	Neolamprologus_brichardi
ENSG00000261796	ISY1-RAB43	86	99.648	ENSNLEG00000028747	ISY1	99	99.648	Nomascus_leucogenys
ENSG00000261796	ISY1-RAB43	70	87.692	ENSMEUG00000008434	-	78	87.692	Notamacropus_eugenii
ENSG00000261796	ISY1-RAB43	99	95.455	ENSOPRG00000005468	-	99	95.455	Ochotona_princeps
ENSG00000261796	ISY1-RAB43	83	84.838	ENSODEG00000002067	-	95	85.199	Octodon_degus
ENSG00000261796	ISY1-RAB43	76	73.413	ENSONIG00000000267	isy1	100	74.603	Oreochromis_niloticus
ENSG00000261796	ISY1-RAB43	85	79.715	ENSOANG00000013141	-	98	79.286	Ornithorhynchus_anatinus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSOCUG00000003923	-	99	98.239	Oryctolagus_cuniculus
ENSG00000261796	ISY1-RAB43	86	76.897	ENSORLG00000013250	isy1	100	76.573	Oryzias_latipes
ENSG00000261796	ISY1-RAB43	86	76.552	ENSORLG00020020966	isy1	100	76.224	Oryzias_latipes_hni
ENSG00000261796	ISY1-RAB43	86	76.897	ENSORLG00015017316	isy1	100	75.862	Oryzias_latipes_hsok
ENSG00000261796	ISY1-RAB43	86	75.945	ENSOMEG00000023905	isy1	100	75.610	Oryzias_melastigma
ENSG00000261796	ISY1-RAB43	85	99.293	ENSOGAG00000005142	-	99	99.293	Otolemur_garnettii
ENSG00000261796	ISY1-RAB43	86	90.845	ENSOARG00000003231	-	94	91.197	Ovis_aries
ENSG00000261796	ISY1-RAB43	86	99.648	ENSPPAG00000042141	-	99	99.648	Pan_paniscus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSPPRG00000003480	-	99	98.239	Panthera_pardus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSPTIG00000017919	-	99	98.239	Panthera_tigris_altaica
ENSG00000261796	ISY1-RAB43	86	92.157	ENSPTRG00000015367	ISY1	99	92.157	Pan_troglodytes
ENSG00000261796	ISY1-RAB43	86	99.296	ENSPANG00000004750	-	99	99.296	Papio_anubis
ENSG00000261796	ISY1-RAB43	86	84.211	ENSPKIG00000024592	isy1	100	84.211	Paramormyrops_kingsleyae
ENSG00000261796	ISY1-RAB43	86	87.719	ENSPSIG00000009384	-	100	87.368	Pelodiscus_sinensis
ENSG00000261796	ISY1-RAB43	83	66.909	ENSPMGG00000016328	isy1	88	65.091	Periophthalmus_magnuspinnatus
ENSG00000261796	ISY1-RAB43	86	97.887	ENSPEMG00000005390	Isy1	99	97.887	Peromyscus_maniculatus_bairdii
ENSG00000261796	ISY1-RAB43	54	85.475	ENSPMAG00000005010	-	99	85.475	Petromyzon_marinus
ENSG00000261796	ISY1-RAB43	86	90.526	ENSPCIG00000000466	-	74	90.175	Phascolarctos_cinereus
ENSG00000261796	ISY1-RAB43	54	66.667	ENSPFOG00000010228	isy1	100	66.111	Poecilia_formosa
ENSG00000261796	ISY1-RAB43	54	86.034	ENSPREG00000015121	isy1	99	70.357	Poecilia_reticulata
ENSG00000261796	ISY1-RAB43	86	99.648	ENSPPYG00000013424	-	99	99.648	Pongo_abelii
ENSG00000261796	ISY1-RAB43	85	87.541	ENSPCAG00000009535	-	99	87.541	Procavia_capensis
ENSG00000261796	ISY1-RAB43	63	100.000	ENSPCOG00000025242	-	99	100.000	Propithecus_coquereli
ENSG00000261796	ISY1-RAB43	86	83.217	ENSPNAG00000000703	isy1	100	83.217	Pygocentrus_nattereri
ENSG00000261796	ISY1-RAB43	86	97.887	ENSRNOG00000010021	Isy1	99	97.887	Rattus_norvegicus
ENSG00000261796	ISY1-RAB43	86	85.563	ENSRBIG00000028747	ISY1	99	85.563	Rhinopithecus_bieti
ENSG00000261796	ISY1-RAB43	86	99.648	ENSRROG00000032314	ISY1	99	99.648	Rhinopithecus_roxellana
ENSG00000261796	ISY1-RAB43	86	99.296	ENSSBOG00000029301	-	99	99.296	Saimiri_boliviensis_boliviensis
ENSG00000261796	ISY1-RAB43	86	90.845	ENSSHAG00000017192	-	99	90.493	Sarcophilus_harrisii
ENSG00000261796	ISY1-RAB43	86	83.566	ENSSFOG00015001127	isy1	100	83.566	Scleropages_formosus
ENSG00000261796	ISY1-RAB43	86	78.671	ENSSMAG00000006601	isy1	100	77.622	Scophthalmus_maximus
ENSG00000261796	ISY1-RAB43	86	78.671	ENSSDUG00000018291	isy1	100	79.021	Seriola_dumerili
ENSG00000261796	ISY1-RAB43	86	78.322	ENSSLDG00000022252	isy1	100	78.671	Seriola_lalandi_dorsalis
ENSG00000261796	ISY1-RAB43	55	72.678	ENSSARG00000007648	-	67	72.678	Sorex_araneus
ENSG00000261796	ISY1-RAB43	86	88.772	ENSSPUG00000018050	-	100	88.421	Sphenodon_punctatus
ENSG00000261796	ISY1-RAB43	52	89.474	ENSSPAG00000021900	isy1	63	89.474	Stegastes_partitus
ENSG00000261796	ISY1-RAB43	86	97.887	ENSSSCG00000038900	-	99	97.887	Sus_scrofa
ENSG00000261796	ISY1-RAB43	71	85.593	ENSTGUG00000007076	-	100	85.593	Taeniopygia_guttata
ENSG00000261796	ISY1-RAB43	67	83.333	ENSTGUG00000003998	-	99	83.333	Taeniopygia_guttata
ENSG00000261796	ISY1-RAB43	54	87.778	ENSTRUG00000002546	isy1	96	87.778	Takifugu_rubripes
ENSG00000261796	ISY1-RAB43	86	72.069	ENSTNIG00000005224	isy1	100	72.069	Tetraodon_nigroviridis
ENSG00000261796	ISY1-RAB43	66	76.364	ENSTBEG00000006938	-	100	76.364	Tupaia_belangeri
ENSG00000261796	ISY1-RAB43	85	92.580	ENSTTRG00000015267	-	99	92.580	Tursiops_truncatus
ENSG00000261796	ISY1-RAB43	86	98.239	ENSVVUG00000018261	-	99	98.239	Vulpes_vulpes
ENSG00000261796	ISY1-RAB43	86	76.842	ENSXMAG00000012452	isy1	100	76.491	Xiphophorus_maculatus