EuRBPDB

Description

Ensembl ID: ENSG00000278615 (Gene tree)
Gene ID: 102288414
Gene Symbol: C11orf98
Alias: C11orf48
Full Name: chromosome 11 open reading frame 98
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 2,402 bases
Position: chr11:62,662,816-62,665,217
Accession: 51238
RBP type: non-canonical RBP
Summary: This gene shares three exons in common with another gene, LBH domain containing 1 (GeneID:79081), but the encoded protein uses a reading frame that is different from that of the LBH domain containing 1 gene. [provided by RefSeq, Nov 2017]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000532786	C11orf98-203	774	NR_104414	-	- (aa)	-	-
ENST00000525675	C11orf98-202	405	-	ENSP00000432316	122 (aa)	-	E9PRG8
ENST00000524958	C11orf98-201	654	-	ENSP00000432523	123 (aa)	-	A0A0B4J220

Gene Model

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000278615	rs7386	11	62662863	?	Heel bone mineral density	30595370			EFO_0009270

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000278615	C11orf98	100	82.927	ENSMUSG00000071653	1810009A15Rik	100	82.927	Mus_musculus