EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000000037 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: si:dkey-6e2.3|zmp:0000000556
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 33097 bases
Position: chrscaffold_89:332626-365722
Accession: ZDB-GENE-130530-559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000051	ResIII	PF04851.15	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000051	-	7731	-	ENSGACP00000000051	2577 (aa)	-	G3N434

Gene Model

Click here to download ENSGACG00000000037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000000037	chd6	67	63.408	ENSGACG00000014897	chd7	85	63.192
ENSGACG00000000037	chd6	72	61.669	ENSGACG00000016694	chd9	82	60.757
ENSGACG00000000037	chd6	55	58.209	ENSGACG00000014096	chd8	68	58.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000037	chd6	99	54.617	ENSG00000124177	CHD6	90	78.603	Homo_sapiens
ENSGACG00000000037	chd6	98	81.422	ENSAPOG00000013736	chd6	79	85.055	Acanthochromis_polyacanthus
ENSGACG00000000037	chd6	93	64.786	ENSAMEG00000009496	CHD6	79	70.515	Ailuropoda_melanoleuca
ENSGACG00000000037	chd6	97	80.432	ENSATEG00000005608	chd6	76	84.269	Anabas_testudineus
ENSGACG00000000037	chd6	83	72.201	ENSAPLG00000015592	CHD6	79	71.948	Anas_platyrhynchos
ENSGACG00000000037	chd6	79	70.908	ENSACAG00000006842	CHD6	76	68.339	Anolis_carolinensis
ENSGACG00000000037	chd6	92	64.104	ENSANAG00000037548	CHD6	94	80.233	Aotus_nancymaae
ENSGACG00000000037	chd6	87	71.046	ENSAMXG00000009576	chd6	78	70.243	Astyanax_mexicanus
ENSGACG00000000037	chd6	87	70.976	ENSBTAG00000005733	CHD6	78	71.504	Bos_taurus
ENSGACG00000000037	chd6	86	69.042	ENSCJAG00000017920	CHD6	94	80.039	Callithrix_jacchus
ENSGACG00000000037	chd6	92	64.342	ENSCAFG00000009236	CHD6	78	70.746	Canis_familiaris
ENSGACG00000000037	chd6	92	64.201	ENSCAFG00020012906	CHD6	91	81.818	Canis_lupus_dingo
ENSGACG00000000037	chd6	92	64.603	ENSCHIG00000017606	CHD6	78	71.438	Capra_hircus
ENSGACG00000000037	chd6	79	67.882	ENSTSYG00000014635	CHD6	80	74.538	Carlito_syrichta
ENSGACG00000000037	chd6	86	69.007	ENSCPOG00000015641	CHD6	79	69.148	Cavia_porcellus
ENSGACG00000000037	chd6	86	69.168	ENSCCAG00000036828	CHD6	94	80.233	Cebus_capucinus
ENSGACG00000000037	chd6	99	54.693	ENSCATG00000039248	CHD6	94	80.233	Cercocebus_atys
ENSGACG00000000037	chd6	86	69.645	ENSCLAG00000013743	CHD6	79	69.529	Chinchilla_lanigera
ENSGACG00000000037	chd6	92	64.217	ENSCSAG00000013997	CHD6	78	69.904	Chlorocebus_sabaeus
ENSGACG00000000037	chd6	65	71.440	ENSCHOG00000012647	CHD6	69	70.312	Choloepus_hoffmanni
ENSGACG00000000037	chd6	81	73.884	ENSCPBG00000019382	CHD6	77	72.448	Chrysemys_picta_bellii
ENSGACG00000000037	chd6	86	69.420	ENSCANG00000043435	CHD6	94	80.233	Colobus_angolensis_palliatus
ENSGACG00000000037	chd6	86	69.284	ENSCGRG00001002694	Chd6	78	69.462	Cricetulus_griseus_chok1gshd
ENSGACG00000000037	chd6	89	73.755	ENSDARG00000017244	chd6	79	74.098	Danio_rerio
ENSGACG00000000037	chd6	86	69.911	ENSDNOG00000004176	CHD6	78	71.569	Dasypus_novemcinctus
ENSGACG00000000037	chd6	92	64.543	ENSEASG00005023433	CHD6	90	84.458	Equus_asinus_asinus
ENSGACG00000000037	chd6	95	64.587	ENSECAG00000011761	CHD6	85	64.951	Equus_caballus
ENSGACG00000000037	chd6	80	77.200	ENSELUG00000012309	chd6	93	76.992	Esox_lucius
ENSGACG00000000037	chd6	92	64.165	ENSFCAG00000003572	CHD6	77	71.035	Felis_catus
ENSGACG00000000037	chd6	83	72.182	ENSFALG00000012563	CHD6	76	71.995	Ficedula_albicollis
ENSGACG00000000037	chd6	87	69.695	ENSFDAG00000013791	CHD6	79	71.082	Fukomys_damarensis
ENSGACG00000000037	chd6	88	79.672	ENSGMOG00000011715	chd6	91	79.173	Gadus_morhua
ENSGACG00000000037	chd6	99	54.710	ENSGGOG00000013123	CHD6	94	80.233	Gorilla_gorilla
ENSGACG00000000037	chd6	99	79.890	ENSHBUG00000014701	chd6	76	84.579	Haplochromis_burtoni
ENSGACG00000000037	chd6	86	69.357	ENSHGLG00000004548	CHD6	77	71.137	Heterocephalus_glaber_female
ENSGACG00000000037	chd6	86	69.294	ENSHGLG00100006401	CHD6	77	71.137	Heterocephalus_glaber_male
ENSGACG00000000037	chd6	87	73.895	ENSIPUG00000003692	chd6	78	73.213	Ictalurus_punctatus
ENSGACG00000000037	chd6	91	64.963	ENSSTOG00000013382	CHD6	78	69.846	Ictidomys_tridecemlineatus
ENSGACG00000000037	chd6	79	75.922	ENSLACG00000010881	CHD6	76	73.001	Latimeria_chalumnae
ENSGACG00000000037	chd6	77	77.861	ENSLOCG00000007386	chd6	81	74.921	Lepisosteus_oculatus
ENSGACG00000000037	chd6	86	69.656	ENSLAFG00000012144	CHD6	79	69.763	Loxodonta_africana
ENSGACG00000000037	chd6	99	54.862	ENSMFAG00000032830	CHD6	94	80.233	Macaca_fascicularis
ENSGACG00000000037	chd6	99	54.862	ENSMMUG00000020458	CHD6	94	80.233	Macaca_mulatta
ENSGACG00000000037	chd6	99	54.862	ENSMNEG00000040847	CHD6	94	80.233	Macaca_nemestrina
ENSGACG00000000037	chd6	99	54.802	ENSMLEG00000031965	CHD6	94	80.233	Mandrillus_leucophaeus
ENSGACG00000000037	chd6	99	80.647	ENSMAMG00000013111	chd6	76	84.543	Mastacembelus_armatus
ENSGACG00000000037	chd6	83	70.607	ENSMGAG00000001121	CHD6	78	69.794	Meleagris_gallopavo
ENSGACG00000000037	chd6	86	69.975	ENSMICG00000016641	CHD6	94	80.233	Microcebus_murinus
ENSGACG00000000037	chd6	77	73.634	ENSMODG00000000720	-	78	75.282	Monodelphis_domestica
ENSGACG00000000037	chd6	86	69.323	MGP_CAROLIEiJ_G0024604	Chd6	89	76.598	Mus_caroli
ENSGACG00000000037	chd6	85	69.386	ENSMUSG00000057133	Chd6	89	76.598	Mus_musculus
ENSGACG00000000037	chd6	86	69.094	MGP_PahariEiJ_G0026048	Chd6	89	76.504	Mus_pahari
ENSGACG00000000037	chd6	86	69.386	MGP_SPRETEiJ_G0025526	Chd6	89	76.692	Mus_spretus
ENSGACG00000000037	chd6	92	64.500	ENSMPUG00000017695	CHD6	85	64.196	Mustela_putorius_furo
ENSGACG00000000037	chd6	92	64.779	ENSMLUG00000016247	CHD6	78	70.592	Myotis_lucifugus
ENSGACG00000000037	chd6	92	79.462	ENSNBRG00000013839	chd6	85	80.035	Neolamprologus_brichardi
ENSGACG00000000037	chd6	86	68.093	ENSNLEG00000006496	CHD6	78	68.758	Nomascus_leucogenys
ENSGACG00000000037	chd6	86	67.443	ENSOPRG00000013376	-	79	67.662	Ochotona_princeps
ENSGACG00000000037	chd6	93	84.340	ENSONIG00000000393	chd6	88	84.555	Oreochromis_niloticus
ENSGACG00000000037	chd6	74	69.231	ENSOANG00000014347	CHD6	68	70.611	Ornithorhynchus_anatinus
ENSGACG00000000037	chd6	86	69.720	ENSOCUG00000012394	CHD6	78	69.846	Oryctolagus_cuniculus
ENSGACG00000000037	chd6	99	77.895	ENSORLG00020021891	chd6	90	92.111	Oryzias_latipes_hni
ENSGACG00000000037	chd6	86	69.697	ENSOGAG00000002427	CHD6	79	69.732	Otolemur_garnettii
ENSGACG00000000037	chd6	92	63.518	ENSOARG00000002597	CHD6	77	69.954	Ovis_aries
ENSGACG00000000037	chd6	86	69.420	ENSPPRG00000014756	CHD6	77	71.101	Panthera_pardus
ENSGACG00000000037	chd6	93	64.374	ENSPTIG00000011094	CHD6	78	70.904	Panthera_tigris_altaica
ENSGACG00000000037	chd6	93	64.443	ENSPTRG00000013504	CHD6	94	80.233	Pan_troglodytes
ENSGACG00000000037	chd6	99	54.765	ENSPANG00000025554	CHD6	94	80.233	Papio_anubis
ENSGACG00000000037	chd6	84	75.175	ENSPKIG00000005578	chd6	77	74.764	Paramormyrops_kingsleyae
ENSGACG00000000037	chd6	95	67.610	ENSPMGG00000014877	chd6	96	66.719	Periophthalmus_magnuspinnatus
ENSGACG00000000037	chd6	84	70.630	ENSPCIG00000028037	CHD6	76	71.560	Phascolarctos_cinereus
ENSGACG00000000037	chd6	98	78.654	ENSPLAG00000003128	chd6	78	82.137	Poecilia_latipinna
ENSGACG00000000037	chd6	97	78.175	ENSPREG00000022653	chd6	94	91.860	Poecilia_reticulata
ENSGACG00000000037	chd6	99	54.600	ENSPPYG00000011016	CHD6	78	69.910	Pongo_abelii
ENSGACG00000000037	chd6	86	69.784	ENSPCOG00000001089	CHD6	94	80.426	Propithecus_coquereli
ENSGACG00000000037	chd6	93	80.722	ENSPNYG00000022516	chd6	84	81.412	Pundamilia_nyererei
ENSGACG00000000037	chd6	86	73.462	ENSPNAG00000012825	chd6	78	72.150	Pygocentrus_nattereri
ENSGACG00000000037	chd6	86	69.289	ENSRNOG00000016744	Chd6	78	69.423	Rattus_norvegicus
ENSGACG00000000037	chd6	86	69.294	ENSSBOG00000022089	CHD6	94	80.233	Saimiri_boliviensis_boliviensis
ENSGACG00000000037	chd6	81	73.342	ENSSHAG00000017072	CHD6	76	71.681	Sarcophilus_harrisii
ENSGACG00000000037	chd6	92	72.104	ENSSFOG00015012920	chd6	84	72.239	Scleropages_formosus
ENSGACG00000000037	chd6	57	90.789	ENSSARG00000002615	-	55	90.789	Sorex_araneus
ENSGACG00000000037	chd6	86	69.861	ENSSSCG00000007360	CHD6	77	71.344	Sus_scrofa
ENSGACG00000000037	chd6	83	72.324	ENSTGUG00000003179	CHD6	80	70.730	Taeniopygia_guttata
ENSGACG00000000037	chd6	83	73.127	ENSTTRG00000013438	CHD6	77	73.552	Tursiops_truncatus
ENSGACG00000000037	chd6	93	63.028	ENSUAMG00000024036	CHD6	91	81.818	Ursus_americanus
ENSGACG00000000037	chd6	93	64.197	ENSUMAG00000002017	CHD6	91	81.818	Ursus_maritimus
ENSGACG00000000037	chd6	85	59.263	ENSVPAG00000007941	CHD6	71	64.964	Vicugna_pacos
ENSGACG00000000037	chd6	95	64.456	ENSVVUG00000029164	CHD6	87	64.376	Vulpes_vulpes
ENSGACG00000000037	chd6	81	65.209	ENSXETG00000021445	chd6	76	63.802	Xenopus_tropicalis