EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000122 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 131619 bases
Position: chrscaffold_58:822855-954473
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000161	RVT_1	PF00078.27	2.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000162	-	1056	-	ENSGACP00000000162	334 (aa)	-	G3N4E2
ENSGACT00000000163	-	975	-	ENSGACP00000000163	325 (aa)	-	G3N4E3
ENSGACT00000000160	-	177	-	ENSGACP00000000160	59 (aa)	-	G3N4E0
ENSGACT00000000161	-	3984	-	ENSGACP00000000161	1328 (aa)	-	G3N4E1
ENSGACT00000000164	-	177	-	ENSGACP00000000164	59 (aa)	-	G3N4E4
ENSGACT00000000156	-	1082	-	ENSGACP00000000156	347 (aa)	-	G3N4D6
ENSGACT00000000155	-	761	-	ENSGACP00000000155	228 (aa)	-	G3N4D5
ENSGACT00000000159	-	435	-	ENSGACP00000000159	145 (aa)	-	G3N4D9

Gene Model

Click here to download ENSGACG00000000122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000122	-	97	59.476	ENSATEG00000021554	-	98	59.476	Anabas_testudineus
ENSGACG00000000122	-	80	41.760	ENSAMXG00000037575	-	98	42.081	Astyanax_mexicanus
ENSGACG00000000122	-	99	50.683	ENSDARG00000105157	BX649434.3	99	50.683	Danio_rerio
ENSGACG00000000122	-	98	53.805	ENSDARG00000101795	CABZ01033394.1	99	53.805	Danio_rerio
ENSGACG00000000122	-	97	48.726	ENSDARG00000098779	BX547930.4	99	48.439	Danio_rerio
ENSGACG00000000122	-	98	40.878	ENSDARG00000100303	CU638714.1	99	40.878	Danio_rerio
ENSGACG00000000122	-	96	56.843	ENSGMOG00000001470	-	99	56.921	Gadus_morhua
ENSGACG00000000122	-	66	57.955	ENSKMAG00000017599	-	99	57.955	Kryptolebias_marmoratus
ENSGACG00000000122	-	76	42.266	ENSLBEG00000008569	-	98	42.224	Labrus_bergylta
ENSGACG00000000122	-	98	40.255	ENSLBEG00000012182	-	99	40.634	Labrus_bergylta
ENSGACG00000000122	-	85	58.385	ENSLBEG00000029018	-	99	58.385	Labrus_bergylta
ENSGACG00000000122	-	57	42.578	ENSLBEG00000022930	-	93	42.578	Labrus_bergylta
ENSGACG00000000122	-	98	40.225	ENSLBEG00000007968	-	99	40.634	Labrus_bergylta
ENSGACG00000000122	-	74	58.638	ENSLBEG00000008622	-	99	58.638	Labrus_bergylta
ENSGACG00000000122	-	98	40.255	ENSLBEG00000007872	-	99	40.665	Labrus_bergylta
ENSGACG00000000122	-	98	40.255	ENSLBEG00000008483	-	99	40.634	Labrus_bergylta
ENSGACG00000000122	-	84	54.627	ENSORLG00000024114	-	99	54.627	Oryzias_latipes
ENSGACG00000000122	-	97	39.646	ENSORLG00000024845	-	99	39.530	Oryzias_latipes
ENSGACG00000000122	-	97	39.492	ENSORLG00020022348	-	99	39.378	Oryzias_latipes_hni
ENSGACG00000000122	-	99	37.284	ENSOMEG00000013951	-	99	37.284	Oryzias_melastigma
ENSGACG00000000122	-	99	50.836	ENSSDUG00000006191	-	99	50.796	Seriola_dumerili
ENSGACG00000000122	-	96	54.510	ENSXMAG00000028545	-	99	54.510	Xiphophorus_maculatus
ENSGACG00000000122	-	99	53.647	ENSXMAG00000024932	-	99	53.647	Xiphophorus_maculatus
ENSGACG00000000122	-	99	53.723	ENSXMAG00000025449	-	99	53.723	Xiphophorus_maculatus
ENSGACG00000000122	-	96	51.756	ENSXMAG00000028372	-	99	51.756	Xiphophorus_maculatus