EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000000172 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7201 bases
Position: chrscaffold_230:6653-13853
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000226	Exo_endo_phos	PF03372.23	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000226	-	7104	-	ENSGACP00000000226	2368 (aa)	-	G3N4K6

Gene Model

Click here to download ENSGACG00000000172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000000172	-	89	94.263	ENSGACG00000002598	-	99	91.578
ENSGACG00000000172	-	100	95.144	ENSGACG00000000540	-	100	95.144
ENSGACG00000000172	-	100	88.487	ENSGACG00000000857	-	100	88.487
ENSGACG00000000172	-	100	93.093	ENSGACG00000019238	-	100	94.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000172	-	100	69.234	ENSACLG00000014666	-	95	68.913	Astatotilapia_calliptera
ENSGACG00000000172	-	100	67.924	ENSACLG00000014925	-	95	68.310	Astatotilapia_calliptera
ENSGACG00000000172	-	100	69.563	ENSACLG00000019297	-	95	69.563	Astatotilapia_calliptera
ENSGACG00000000172	-	76	76.374	ENSACLG00000007543	-	99	76.374	Astatotilapia_calliptera
ENSGACG00000000172	-	99	60.894	ENSACLG00000007512	-	95	60.967	Astatotilapia_calliptera
ENSGACG00000000172	-	100	69.244	ENSACLG00000019579	-	95	68.995	Astatotilapia_calliptera
ENSGACG00000000172	-	99	48.332	ENSACLG00000016866	-	95	48.454	Astatotilapia_calliptera
ENSGACG00000000172	-	100	64.428	ENSORLG00000028050	-	95	64.339	Oryzias_latipes
ENSGACG00000000172	-	100	56.941	ENSOMEG00000007870	-	88	63.588	Oryzias_melastigma
ENSGACG00000000172	-	95	63.394	ENSOMEG00000021040	-	99	63.394	Oryzias_melastigma
ENSGACG00000000172	-	100	49.178	ENSXMAG00000021109	-	98	49.316	Xiphophorus_maculatus
ENSGACG00000000172	-	100	46.363	ENSXMAG00000026498	-	98	49.902	Xiphophorus_maculatus
ENSGACG00000000172	-	100	49.178	ENSXMAG00000026285	-	98	49.316	Xiphophorus_maculatus
ENSGACG00000000172	-	100	46.628	ENSXMAG00000025456	-	82	49.590	Xiphophorus_maculatus