EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000000182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2177 bases
Position: chrscaffold_1044:830-3006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000237	PRP38	PF03371.15	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000237	-	915	-	ENSGACP00000000237	170 (aa)	-	G3N4L7

Gene Model

Click here to download ENSGACG00000000182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000000182	-	100	98.824	ENSGACG00000005423	prpf38a	55	98.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000182	-	100	94.706	ENSAPOG00000011652	prpf38a	54	94.706	Acanthochromis_polyacanthus
ENSGACG00000000182	-	100	94.706	ENSAOCG00000018004	prpf38a	54	94.706	Amphiprion_ocellaris
ENSGACG00000000182	-	100	94.706	ENSAPEG00000021414	prpf38a	54	94.706	Amphiprion_percula
ENSGACG00000000182	-	100	91.176	ENSATEG00000004608	prpf38a	54	91.176	Anabas_testudineus
ENSGACG00000000182	-	100	92.353	ENSACLG00000021595	prpf38a	54	92.353	Astatotilapia_calliptera
ENSGACG00000000182	-	100	76.744	ENSCPOG00000005079	PRPF38A	50	71.975	Cavia_porcellus
ENSGACG00000000182	-	100	92.353	ENSCVAG00000012305	prpf38a	54	92.353	Cyprinodon_variegatus
ENSGACG00000000182	-	99	92.308	ENSELUG00000021094	prpf38a	54	92.308	Esox_lucius
ENSGACG00000000182	-	92	91.026	ENSFHEG00000014317	prpf38a	52	90.968	Fundulus_heteroclitus
ENSGACG00000000182	-	100	92.941	ENSGAFG00000012422	prpf38a	54	92.941	Gambusia_affinis
ENSGACG00000000182	-	100	92.941	ENSKMAG00000006588	prpf38a	54	92.941	Kryptolebias_marmoratus
ENSGACG00000000182	-	100	85.965	ENSLOCG00000006262	prpf38a	50	85.256	Lepisosteus_oculatus
ENSGACG00000000182	-	100	94.706	ENSMAMG00000015431	prpf38a	54	94.706	Mastacembelus_armatus
ENSGACG00000000182	-	100	92.353	ENSMZEG00005017838	prpf38a	54	92.353	Maylandia_zebra
ENSGACG00000000182	-	100	95.294	ENSMALG00000019363	prpf38a	53	95.294	Monopterus_albus
ENSGACG00000000182	-	100	91.176	ENSONIG00000007816	prpf38a	54	91.176	Oreochromis_niloticus
ENSGACG00000000182	-	100	90.588	ENSORLG00000013485	prpf38a	54	90.588	Oryzias_latipes
ENSGACG00000000182	-	100	90.588	ENSORLG00020002130	prpf38a	54	90.588	Oryzias_latipes_hni
ENSGACG00000000182	-	100	90.000	ENSORLG00015021393	prpf38a	54	90.000	Oryzias_latipes_hsok
ENSGACG00000000182	-	100	88.824	ENSPKIG00000011439	prpf38a	50	88.387	Paramormyrops_kingsleyae
ENSGACG00000000182	-	100	92.941	ENSPFOG00000004248	prpf38a	54	92.941	Poecilia_formosa
ENSGACG00000000182	-	100	92.941	ENSPLAG00000010328	prpf38a	54	92.941	Poecilia_latipinna
ENSGACG00000000182	-	100	92.941	ENSPMEG00000011804	prpf38a	55	92.941	Poecilia_mexicana
ENSGACG00000000182	-	100	92.353	ENSPNYG00000005571	prpf38a	54	92.353	Pundamilia_nyererei
ENSGACG00000000182	-	100	88.889	ENSSFOG00015013572	prpf38a	50	87.821	Scleropages_formosus
ENSGACG00000000182	-	91	93.548	ENSSMAG00000015379	prpf38a	50	93.548	Scophthalmus_maximus
ENSGACG00000000182	-	100	94.706	ENSSDUG00000001324	prpf38a	54	94.706	Seriola_dumerili
ENSGACG00000000182	-	100	94.706	ENSSLDG00000014803	prpf38a	54	94.706	Seriola_lalandi_dorsalis
ENSGACG00000000182	-	100	92.353	ENSTNIG00000005533	prpf38a	54	92.353	Tetraodon_nigroviridis
ENSGACG00000000182	-	100	92.941	ENSXMAG00000026143	prpf38a	54	92.941	Xiphophorus_maculatus