EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000227 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5859 bases
Position: chrscaffold_238:10055-15913
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000292	TRM	PF02005.16	8e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000292	-	1833	-	ENSGACP00000000292	611 (aa)	-	G3N4S2

Gene Model

Click here to download ENSGACG00000000227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000227	trmt1	94	64.055	ENSG00000104907	TRMT1	100	71.354	Homo_sapiens
ENSGACG00000000227	trmt1	96	62.104	ENSAMEG00000012598	TRMT1	89	62.104	Ailuropoda_melanoleuca
ENSGACG00000000227	trmt1	92	74.517	ENSACIG00000018680	trmt1	89	73.638	Amphilophus_citrinellus
ENSGACG00000000227	trmt1	93	83.538	ENSAOCG00000006781	trmt1	86	83.012	Amphiprion_ocellaris
ENSGACG00000000227	trmt1	93	83.713	ENSAPEG00000007712	trmt1	86	83.187	Amphiprion_percula
ENSGACG00000000227	trmt1	93	84.912	ENSATEG00000001872	trmt1	85	84.035	Anabas_testudineus
ENSGACG00000000227	trmt1	92	66.025	ENSACAG00000003825	TRMT1	92	66.025	Anolis_carolinensis
ENSGACG00000000227	trmt1	94	62.712	ENSANAG00000023016	TRMT1	94	62.245	Aotus_nancymaae
ENSGACG00000000227	trmt1	99	77.340	ENSACLG00000010073	trmt1	93	80.877	Astatotilapia_calliptera
ENSGACG00000000227	trmt1	93	76.736	ENSAMXG00000012026	trmt1	86	76.042	Astyanax_mexicanus
ENSGACG00000000227	trmt1	94	63.140	ENSBTAG00000019325	TRMT1	83	62.564	Bos_taurus
ENSGACG00000000227	trmt1	83	41.683	WBGene00006613	trm-1	93	41.154	Caenorhabditis_elegans
ENSGACG00000000227	trmt1	99	59.236	ENSCJAG00000004566	TRMT1	90	61.186	Callithrix_jacchus
ENSGACG00000000227	trmt1	99	61.353	ENSCAFG00000017070	TRMT1	93	62.771	Canis_familiaris
ENSGACG00000000227	trmt1	99	61.129	ENSCAFG00020005397	TRMT1	90	63.527	Canis_lupus_dingo
ENSGACG00000000227	trmt1	94	63.543	ENSCHIG00000013569	TRMT1	88	62.969	Capra_hircus
ENSGACG00000000227	trmt1	94	61.929	ENSTSYG00000003207	TRMT1	89	61.630	Carlito_syrichta
ENSGACG00000000227	trmt1	85	60.452	ENSCAPG00000003355	TRMT1	94	60.113	Cavia_aperea
ENSGACG00000000227	trmt1	99	59.429	ENSCPOG00000011754	TRMT1	95	59.141	Cavia_porcellus
ENSGACG00000000227	trmt1	94	61.525	ENSCCAG00000022263	TRMT1	94	61.224	Cebus_capucinus
ENSGACG00000000227	trmt1	92	64.348	ENSCATG00000039850	TRMT1	87	63.937	Cercocebus_atys
ENSGACG00000000227	trmt1	74	56.250	ENSCATG00000038220	-	83	56.250	Cercocebus_atys
ENSGACG00000000227	trmt1	99	60.800	ENSCLAG00000015295	TRMT1	94	58.909	Chinchilla_lanigera
ENSGACG00000000227	trmt1	77	69.118	ENSCSAG00000006500	TRMT1	89	68.632	Chlorocebus_sabaeus
ENSGACG00000000227	trmt1	92	69.081	ENSCPBG00000023866	TRMT1	85	69.081	Chrysemys_picta_bellii
ENSGACG00000000227	trmt1	89	47.143	ENSCING00000002884	-	98	47.349	Ciona_intestinalis
ENSGACG00000000227	trmt1	86	50.189	ENSCSAVG00000010927	-	100	48.148	Ciona_savignyi
ENSGACG00000000227	trmt1	92	50.347	ENSCANG00000040631	TRMT1	87	49.913	Colobus_angolensis_palliatus
ENSGACG00000000227	trmt1	94	48.810	ENSCANG00000031650	-	90	49.233	Colobus_angolensis_palliatus
ENSGACG00000000227	trmt1	99	59.551	ENSCGRG00001022594	Trmt1	94	59.646	Cricetulus_griseus_chok1gshd
ENSGACG00000000227	trmt1	99	59.551	ENSCGRG00000017732	Trmt1	94	59.646	Cricetulus_griseus_crigri
ENSGACG00000000227	trmt1	94	80.104	ENSCSEG00000001643	trmt1	86	80.769	Cynoglossus_semilaevis
ENSGACG00000000227	trmt1	98	77.508	ENSCVAG00000011886	trmt1	94	76.661	Cyprinodon_variegatus
ENSGACG00000000227	trmt1	92	73.230	ENSDARG00000010978	trmt1	86	73.057	Danio_rerio
ENSGACG00000000227	trmt1	83	42.857	ENSDNOG00000048240	-	89	42.857	Dasypus_novemcinctus
ENSGACG00000000227	trmt1	94	61.433	ENSDORG00000014298	Trmt1	88	61.301	Dipodomys_ordii
ENSGACG00000000227	trmt1	87	46.777	FBgn0032430	CG6388	91	46.777	Drosophila_melanogaster
ENSGACG00000000227	trmt1	81	49.597	ENSEBUG00000003449	trmt1	75	49.126	Eptatretus_burgeri
ENSGACG00000000227	trmt1	94	62.628	ENSEASG00005004050	TRMT1	91	62.628	Equus_asinus_asinus
ENSGACG00000000227	trmt1	94	62.628	ENSECAG00000016149	TRMT1	91	62.628	Equus_caballus
ENSGACG00000000227	trmt1	64	53.401	ENSEEUG00000014102	-	100	53.401	Erinaceus_europaeus
ENSGACG00000000227	trmt1	93	75.521	ENSELUG00000021659	trmt1	86	75.347	Esox_lucius
ENSGACG00000000227	trmt1	99	60.320	ENSFCAG00000000483	TRMT1	95	60.320	Felis_catus
ENSGACG00000000227	trmt1	94	62.628	ENSFDAG00000007386	TRMT1	88	62.628	Fukomys_damarensis
ENSGACG00000000227	trmt1	89	78.345	ENSFHEG00000012865	trmt1	95	77.817	Fundulus_heteroclitus
ENSGACG00000000227	trmt1	93	76.450	ENSGMOG00000006564	trmt1	99	76.450	Gadus_morhua
ENSGACG00000000227	trmt1	96	80.000	ENSGAFG00000011862	trmt1	92	80.000	Gambusia_affinis
ENSGACG00000000227	trmt1	91	68.496	ENSGAGG00000016432	TRMT1	84	68.384	Gopherus_agassizii
ENSGACG00000000227	trmt1	94	64.225	ENSGGOG00000014007	TRMT1	88	63.823	Gorilla_gorilla
ENSGACG00000000227	trmt1	89	72.000	ENSHBUG00000008821	trmt1	92	71.636	Haplochromis_burtoni
ENSGACG00000000227	trmt1	99	60.064	ENSHGLG00000015972	TRMT1	94	59.776	Heterocephalus_glaber_female
ENSGACG00000000227	trmt1	99	57.649	ENSHGLG00100018112	TRMT1	93	58.388	Heterocephalus_glaber_male
ENSGACG00000000227	trmt1	93	77.583	ENSHCOG00000009447	trmt1	89	77.058	Hippocampus_comes
ENSGACG00000000227	trmt1	92	73.585	ENSIPUG00000002899	trmt1	85	73.585	Ictalurus_punctatus
ENSGACG00000000227	trmt1	92	63.368	ENSSTOG00000012531	TRMT1	88	63.176	Ictidomys_tridecemlineatus
ENSGACG00000000227	trmt1	97	61.311	ENSJJAG00000017154	Trmt1	92	61.184	Jaculus_jaculus
ENSGACG00000000227	trmt1	93	81.882	ENSKMAG00000011809	trmt1	96	80.245	Kryptolebias_marmoratus
ENSGACG00000000227	trmt1	93	82.487	ENSLBEG00000012703	trmt1	85	81.961	Labrus_bergylta
ENSGACG00000000227	trmt1	93	57.592	ENSLACG00000014585	TRMT1	94	57.592	Latimeria_chalumnae
ENSGACG00000000227	trmt1	92	69.808	ENSLOCG00000006479	trmt1	98	69.808	Lepisosteus_oculatus
ENSGACG00000000227	trmt1	94	63.077	ENSLAFG00000014072	TRMT1	90	63.077	Loxodonta_africana
ENSGACG00000000227	trmt1	92	64.174	ENSMFAG00000033143	TRMT1	87	63.763	Macaca_fascicularis
ENSGACG00000000227	trmt1	92	61.538	ENSMMUG00000001167	TRMT1	87	61.121	Macaca_mulatta
ENSGACG00000000227	trmt1	92	64.174	ENSMNEG00000037867	TRMT1	87	63.763	Macaca_nemestrina
ENSGACG00000000227	trmt1	92	64.174	ENSMLEG00000016142	TRMT1	87	63.763	Mandrillus_leucophaeus
ENSGACG00000000227	trmt1	93	84.939	ENSMAMG00000004357	trmt1	86	84.413	Mastacembelus_armatus
ENSGACG00000000227	trmt1	97	78.763	ENSMZEG00005014510	trmt1	90	78.428	Maylandia_zebra
ENSGACG00000000227	trmt1	99	60.258	ENSMAUG00000011134	Trmt1	93	59.935	Mesocricetus_auratus
ENSGACG00000000227	trmt1	94	63.283	ENSMICG00000000793	TRMT1	88	63.095	Microcebus_murinus
ENSGACG00000000227	trmt1	95	62.000	ENSMOCG00000015895	Trmt1	90	61.603	Microtus_ochrogaster
ENSGACG00000000227	trmt1	93	80.282	ENSMMOG00000011097	trmt1	93	80.282	Mola_mola
ENSGACG00000000227	trmt1	95	63.238	ENSMODG00000011619	TRMT1	96	62.901	Monodelphis_domestica
ENSGACG00000000227	trmt1	99	61.378	MGP_CAROLIEiJ_G0031304	Trmt1	99	60.985	Mus_caroli
ENSGACG00000000227	trmt1	99	61.538	ENSMUSG00000001909	Trmt1	99	61.364	Mus_musculus
ENSGACG00000000227	trmt1	99	61.378	MGP_SPRETEiJ_G0032422	Trmt1	99	59.696	Mus_spretus
ENSGACG00000000227	trmt1	91	64.623	ENSMPUG00000004210	TRMT1	82	64.623	Mustela_putorius_furo
ENSGACG00000000227	trmt1	95	63.333	ENSMLUG00000012809	TRMT1	89	62.938	Myotis_lucifugus
ENSGACG00000000227	trmt1	98	60.129	ENSNGAG00000022486	Trmt1	94	60.129	Nannospalax_galili
ENSGACG00000000227	trmt1	80	82.779	ENSNBRG00000024376	trmt1	86	82.779	Neolamprologus_brichardi
ENSGACG00000000227	trmt1	72	66.327	ENSNLEG00000013019	-	84	65.753	Nomascus_leucogenys
ENSGACG00000000227	trmt1	92	63.845	ENSMEUG00000013756	TRMT1	97	63.845	Notamacropus_eugenii
ENSGACG00000000227	trmt1	79	65.534	ENSOPRG00000009471	-	74	65.534	Ochotona_princeps
ENSGACG00000000227	trmt1	91	63.763	ENSODEG00000010323	TRMT1	87	63.287	Octodon_degus
ENSGACG00000000227	trmt1	97	81.773	ENSONIG00000000400	trmt1	99	79.153	Oreochromis_niloticus
ENSGACG00000000227	trmt1	77	69.263	ENSOCUG00000021934	TRMT1	90	69.263	Oryctolagus_cuniculus
ENSGACG00000000227	trmt1	93	77.123	ENSORLG00000020074	trmt1	91	76.207	Oryzias_latipes
ENSGACG00000000227	trmt1	93	81.930	ENSORLG00020007561	trmt1	90	80.210	Oryzias_latipes_hni
ENSGACG00000000227	trmt1	93	81.930	ENSORLG00015006547	trmt1	87	81.404	Oryzias_latipes_hsok
ENSGACG00000000227	trmt1	93	81.754	ENSOMEG00000019343	trmt1	87	81.053	Oryzias_melastigma
ENSGACG00000000227	trmt1	92	64.000	ENSOGAG00000025576	TRMT1	90	64.000	Otolemur_garnettii
ENSGACG00000000227	trmt1	99	49.128	ENSOARG00000009397	TRMT1	88	49.525	Ovis_aries
ENSGACG00000000227	trmt1	92	52.091	ENSPPRG00000012117	TRMT1	87	56.620	Panthera_pardus
ENSGACG00000000227	trmt1	68	67.500	ENSPTIG00000008833	TRMT1	81	67.500	Panthera_tigris_altaica
ENSGACG00000000227	trmt1	90	47.193	ENSPTRG00000050421	-	90	47.007	Pan_troglodytes
ENSGACG00000000227	trmt1	94	64.225	ENSPTRG00000010557	TRMT1	88	63.823	Pan_troglodytes
ENSGACG00000000227	trmt1	92	64.348	ENSPANG00000009247	TRMT1	87	63.937	Papio_anubis
ENSGACG00000000227	trmt1	71	57.303	ENSPANG00000034058	-	78	56.180	Papio_anubis
ENSGACG00000000227	trmt1	93	74.868	ENSPKIG00000005309	trmt1	85	74.341	Paramormyrops_kingsleyae
ENSGACG00000000227	trmt1	90	56.036	ENSPSIG00000008762	TRMT1	80	56.036	Pelodiscus_sinensis
ENSGACG00000000227	trmt1	95	77.740	ENSPMGG00000019764	trmt1	94	77.740	Periophthalmus_magnuspinnatus
ENSGACG00000000227	trmt1	99	60.417	ENSPEMG00000016247	Trmt1	94	60.417	Peromyscus_maniculatus_bairdii
ENSGACG00000000227	trmt1	94	60.622	ENSPMAG00000004329	trmt1	91	60.622	Petromyzon_marinus
ENSGACG00000000227	trmt1	92	65.439	ENSPCIG00000019273	TRMT1	88	65.088	Phascolarctos_cinereus
ENSGACG00000000227	trmt1	92	83.009	ENSPFOG00000008527	trmt1	88	83.009	Poecilia_formosa
ENSGACG00000000227	trmt1	92	81.947	ENSPLAG00000018788	trmt1	91	81.146	Poecilia_latipinna
ENSGACG00000000227	trmt1	96	80.169	ENSPMEG00000013120	trmt1	91	80.169	Poecilia_mexicana
ENSGACG00000000227	trmt1	96	78.644	ENSPREG00000000211	trmt1	88	78.644	Poecilia_reticulata
ENSGACG00000000227	trmt1	94	63.714	ENSPPYG00000009622	TRMT1	88	63.311	Pongo_abelii
ENSGACG00000000227	trmt1	99	55.538	ENSPCAG00000003698	TRMT1	95	55.538	Procavia_capensis
ENSGACG00000000227	trmt1	94	63.390	ENSPCOG00000008653	TRMT1	89	63.051	Propithecus_coquereli
ENSGACG00000000227	trmt1	94	63.265	ENSPVAG00000015076	TRMT1	89	63.265	Pteropus_vampyrus
ENSGACG00000000227	trmt1	93	79.298	ENSPNYG00000013960	trmt1	93	78.947	Pundamilia_nyererei
ENSGACG00000000227	trmt1	93	67.073	ENSPNAG00000024859	trmt1	89	67.073	Pygocentrus_nattereri
ENSGACG00000000227	trmt1	96	61.488	ENSRNOG00000002914	Trmt1	94	61.488	Rattus_norvegicus
ENSGACG00000000227	trmt1	94	47.579	ENSRBIG00000037505	-	91	47.236	Rhinopithecus_bieti
ENSGACG00000000227	trmt1	92	64.696	ENSRBIG00000038324	TRMT1	87	64.223	Rhinopithecus_bieti
ENSGACG00000000227	trmt1	94	46.912	ENSRROG00000031847	-	90	46.566	Rhinopithecus_roxellana
ENSGACG00000000227	trmt1	92	64.696	ENSRROG00000028599	TRMT1	87	64.223	Rhinopithecus_roxellana
ENSGACG00000000227	trmt1	82	37.640	YDR120C	-	92	37.430	Saccharomyces_cerevisiae
ENSGACG00000000227	trmt1	94	61.864	ENSSBOG00000028861	TRMT1	94	61.395	Saimiri_boliviensis_boliviensis
ENSGACG00000000227	trmt1	92	66.784	ENSSHAG00000014381	TRMT1	96	65.372	Sarcophilus_harrisii
ENSGACG00000000227	trmt1	92	75.131	ENSSFOG00015004139	trmt1	84	74.781	Scleropages_formosus
ENSGACG00000000227	trmt1	93	83.798	ENSSMAG00000021136	trmt1	88	81.942	Scophthalmus_maximus
ENSGACG00000000227	trmt1	94	84.775	ENSSDUG00000012740	trmt1	86	83.910	Seriola_dumerili
ENSGACG00000000227	trmt1	94	84.602	ENSSLDG00000005971	trmt1	86	83.737	Seriola_lalandi_dorsalis
ENSGACG00000000227	trmt1	90	60.106	ENSSARG00000005138	TRMT1	99	60.106	Sorex_araneus
ENSGACG00000000227	trmt1	91	51.134	ENSSPUG00000001084	TRMT1	89	51.568	Sphenodon_punctatus
ENSGACG00000000227	trmt1	93	83.012	ENSSPAG00000007153	trmt1	95	82.487	Stegastes_partitus
ENSGACG00000000227	trmt1	91	63.620	ENSSSCG00000013744	TRMT1	90	63.620	Sus_scrofa
ENSGACG00000000227	trmt1	91	74.825	ENSTRUG00000010700	trmt1	86	75.175	Takifugu_rubripes
ENSGACG00000000227	trmt1	93	78.947	ENSTNIG00000018808	trmt1	99	78.947	Tetraodon_nigroviridis
ENSGACG00000000227	trmt1	94	61.186	ENSTTRG00000006379	TRMT1	94	58.240	Tursiops_truncatus
ENSGACG00000000227	trmt1	98	61.639	ENSUAMG00000022911	TRMT1	93	62.479	Ursus_americanus
ENSGACG00000000227	trmt1	96	62.207	ENSUMAG00000006027	TRMT1	93	62.207	Ursus_maritimus
ENSGACG00000000227	trmt1	96	62.895	ENSVVUG00000024177	TRMT1	90	62.895	Vulpes_vulpes
ENSGACG00000000227	trmt1	75	70.000	ENSXETG00000033863	TRMT1	92	70.000	Xenopus_tropicalis
ENSGACG00000000227	trmt1	93	82.662	ENSXCOG00000015733	trmt1	89	82.662	Xiphophorus_couchianus
ENSGACG00000000227	trmt1	91	83.066	ENSXMAG00000013823	trmt1	97	83.066	Xiphophorus_maculatus