EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000235 (Gene tree)
Gene ID: -
Gene Symbol: tsn
Alias: id:ibd2900|wu:fb38b07|wu:fi31h02|zgc:123170
Full Name: translin
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2504 bases
Position: chrscaffold_69:17019-19522
Accession: ZDB-GENE-030131-6039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000309	Translin	PF01997.16	8.8e-56	1	1
ENSGACP00000000311	Translin	PF01997.16	1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000311	-	711	-	ENSGACP00000000311	237 (aa)	-	G3N4U1
ENSGACT00000000309	-	1119	-	ENSGACP00000000309	228 (aa)	-	G3N4T9

Gene Model

Click here to download ENSGACG00000000235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000235	tsn	97	78.378	ENSG00000211460	TSN	97	78.378	Homo_sapiens
ENSGACG00000000235	tsn	98	92.952	ENSAPOG00000002063	tsn	100	92.952	Acanthochromis_polyacanthus
ENSGACG00000000235	tsn	97	77.928	ENSAMEG00000005055	TSN	97	77.928	Ailuropoda_melanoleuca
ENSGACG00000000235	tsn	98	92.952	ENSACIG00000021694	tsn	100	92.952	Amphilophus_citrinellus
ENSGACG00000000235	tsn	98	92.952	ENSAOCG00000015574	tsn	100	92.952	Amphiprion_ocellaris
ENSGACG00000000235	tsn	98	92.952	ENSAPEG00000001677	tsn	100	92.952	Amphiprion_percula
ENSGACG00000000235	tsn	97	92.308	ENSATEG00000004115	tsn	97	92.308	Anabas_testudineus
ENSGACG00000000235	tsn	94	79.909	ENSACAG00000004757	TSN	99	79.909	Anolis_carolinensis
ENSGACG00000000235	tsn	97	78.378	ENSANAG00000026842	TSN	97	78.378	Aotus_nancymaae
ENSGACG00000000235	tsn	98	92.511	ENSACLG00000020831	tsn	100	92.511	Astatotilapia_calliptera
ENSGACG00000000235	tsn	98	87.665	ENSAMXG00000035417	tsn	100	87.665	Astyanax_mexicanus
ENSGACG00000000235	tsn	97	77.928	ENSBTAG00000006059	TSN	97	77.928	Bos_taurus
ENSGACG00000000235	tsn	97	78.378	ENSCJAG00000047222	-	97	78.378	Callithrix_jacchus
ENSGACG00000000235	tsn	97	77.928	ENSCJAG00000044533	-	96	79.082	Callithrix_jacchus
ENSGACG00000000235	tsn	50	68.142	ENSCJAG00000008511	-	88	68.142	Callithrix_jacchus
ENSGACG00000000235	tsn	98	77.679	ENSCAFG00000004700	TSN	93	77.679	Canis_familiaris
ENSGACG00000000235	tsn	97	77.928	ENSCAFG00020011747	TSN	97	77.928	Canis_lupus_dingo
ENSGACG00000000235	tsn	97	77.928	ENSCHIG00000010715	TSN	97	77.928	Capra_hircus
ENSGACG00000000235	tsn	97	78.378	ENSTSYG00000004395	TSN	97	78.378	Carlito_syrichta
ENSGACG00000000235	tsn	88	66.000	ENSCAPG00000015595	TSN	78	66.000	Cavia_aperea
ENSGACG00000000235	tsn	97	78.378	ENSCPOG00000035645	TSN	97	78.378	Cavia_porcellus
ENSGACG00000000235	tsn	66	64.474	ENSCCAG00000034886	-	84	64.474	Cebus_capucinus
ENSGACG00000000235	tsn	97	77.928	ENSCCAG00000026371	TSN	97	77.928	Cebus_capucinus
ENSGACG00000000235	tsn	97	78.378	ENSCATG00000032155	TSN	97	78.378	Cercocebus_atys
ENSGACG00000000235	tsn	97	78.378	ENSCLAG00000006171	TSN	97	78.378	Chinchilla_lanigera
ENSGACG00000000235	tsn	97	78.378	ENSCSAG00000016712	TSN	97	78.378	Chlorocebus_sabaeus
ENSGACG00000000235	tsn	97	67.568	ENSCPBG00000018116	-	98	67.411	Chrysemys_picta_bellii
ENSGACG00000000235	tsn	66	74.834	ENSCPBG00000013741	-	80	74.834	Chrysemys_picta_bellii
ENSGACG00000000235	tsn	95	48.624	ENSCING00000012612	-	100	48.624	Ciona_intestinalis
ENSGACG00000000235	tsn	95	46.544	ENSCSAVG00000009485	-	97	46.544	Ciona_savignyi
ENSGACG00000000235	tsn	97	78.378	ENSCANG00000041881	TSN	97	78.378	Colobus_angolensis_palliatus
ENSGACG00000000235	tsn	97	78.378	ENSCGRG00001018233	Tsn	97	78.378	Cricetulus_griseus_chok1gshd
ENSGACG00000000235	tsn	97	78.378	ENSCGRG00000008331	Tsn	97	78.378	Cricetulus_griseus_crigri
ENSGACG00000000235	tsn	97	87.330	ENSCSEG00000005825	tsn	97	87.330	Cynoglossus_semilaevis
ENSGACG00000000235	tsn	97	80.631	ENSCVAG00000022024	tsn	100	80.176	Cyprinodon_variegatus
ENSGACG00000000235	tsn	96	90.000	ENSDARG00000041830	tsn	97	90.000	Danio_rerio
ENSGACG00000000235	tsn	97	77.928	ENSDNOG00000025740	TSN	97	77.928	Dasypus_novemcinctus
ENSGACG00000000235	tsn	97	78.378	ENSDORG00000026251	-	97	78.378	Dipodomys_ordii
ENSGACG00000000235	tsn	96	53.812	FBgn0033528	trsn	93	53.812	Drosophila_melanogaster
ENSGACG00000000235	tsn	97	77.928	ENSEASG00005004774	TSN	97	77.928	Equus_asinus_asinus
ENSGACG00000000235	tsn	97	77.928	ENSECAG00000015930	TSN	97	77.928	Equus_caballus
ENSGACG00000000235	tsn	74	80.952	ENSEEUG00000013935	TSN	97	80.952	Erinaceus_europaeus
ENSGACG00000000235	tsn	96	91.364	ENSELUG00000007669	tsn	97	91.364	Esox_lucius
ENSGACG00000000235	tsn	71	61.491	ENSFCAG00000022306	-	91	61.491	Felis_catus
ENSGACG00000000235	tsn	97	77.928	ENSFCAG00000027149	TSN	97	77.928	Felis_catus
ENSGACG00000000235	tsn	88	80.597	ENSFALG00000013247	TSN	90	78.947	Ficedula_albicollis
ENSGACG00000000235	tsn	97	78.378	ENSFDAG00000012302	TSN	97	78.378	Fukomys_damarensis
ENSGACG00000000235	tsn	98	90.308	ENSFHEG00000015531	tsn	100	90.308	Fundulus_heteroclitus
ENSGACG00000000235	tsn	98	85.841	ENSGMOG00000009247	tsn	100	85.841	Gadus_morhua
ENSGACG00000000235	tsn	97	79.638	ENSGALG00000011652	TSN	97	79.638	Gallus_gallus
ENSGACG00000000235	tsn	98	89.868	ENSGAFG00000003816	tsn	100	89.868	Gambusia_affinis
ENSGACG00000000235	tsn	97	78.378	ENSGGOG00000002216	TSN	96	80.100	Gorilla_gorilla
ENSGACG00000000235	tsn	98	92.070	ENSHBUG00000002340	tsn	85	92.070	Haplochromis_burtoni
ENSGACG00000000235	tsn	97	78.378	ENSHGLG00000007038	TSN	97	78.378	Heterocephalus_glaber_female
ENSGACG00000000235	tsn	97	78.378	ENSHGLG00100000069	TSN	97	78.378	Heterocephalus_glaber_male
ENSGACG00000000235	tsn	97	88.235	ENSHCOG00000001756	tsn	98	88.235	Hippocampus_comes
ENSGACG00000000235	tsn	98	88.546	ENSIPUG00000021370	tsn	100	88.546	Ictalurus_punctatus
ENSGACG00000000235	tsn	97	78.378	ENSSTOG00000000972	TSN	97	78.378	Ictidomys_tridecemlineatus
ENSGACG00000000235	tsn	97	78.378	ENSJJAG00000006730	Tsn	97	78.378	Jaculus_jaculus
ENSGACG00000000235	tsn	98	92.070	ENSKMAG00000004996	tsn	100	92.070	Kryptolebias_marmoratus
ENSGACG00000000235	tsn	96	93.636	ENSLBEG00000012620	tsn	97	93.636	Labrus_bergylta
ENSGACG00000000235	tsn	98	63.319	ENSLACG00000005246	TSN	99	63.319	Latimeria_chalumnae
ENSGACG00000000235	tsn	96	88.182	ENSLOCG00000002191	tsn	96	88.182	Lepisosteus_oculatus
ENSGACG00000000235	tsn	97	72.000	ENSLAFG00000032428	TSN	97	72.000	Loxodonta_africana
ENSGACG00000000235	tsn	97	78.378	ENSMFAG00000044217	TSN	97	78.378	Macaca_fascicularis
ENSGACG00000000235	tsn	97	78.378	ENSMMUG00000021119	TSN	97	78.378	Macaca_mulatta
ENSGACG00000000235	tsn	97	78.378	ENSMNEG00000040632	TSN	97	78.378	Macaca_nemestrina
ENSGACG00000000235	tsn	54	74.194	ENSMLEG00000038656	TSN	96	74.194	Mandrillus_leucophaeus
ENSGACG00000000235	tsn	98	88.546	ENSMAMG00000019536	tsn	100	88.546	Mastacembelus_armatus
ENSGACG00000000235	tsn	98	92.511	ENSMZEG00005018715	tsn	85	92.511	Maylandia_zebra
ENSGACG00000000235	tsn	74	82.941	ENSMGAG00000011956	TSN	87	82.941	Meleagris_gallopavo
ENSGACG00000000235	tsn	92	77.143	ENSMAUG00000018800	Tsn	97	80.500	Mesocricetus_auratus
ENSGACG00000000235	tsn	97	78.378	ENSMICG00000015793	TSN	97	78.378	Microcebus_murinus
ENSGACG00000000235	tsn	97	78.829	ENSMOCG00000013248	Tsn	97	78.829	Microtus_ochrogaster
ENSGACG00000000235	tsn	89	89.268	ENSMMOG00000019661	tsn	100	89.268	Mola_mola
ENSGACG00000000235	tsn	96	76.923	ENSMODG00000000147	TSN	97	76.682	Monodelphis_domestica
ENSGACG00000000235	tsn	98	90.749	ENSMALG00000001827	tsn	100	90.749	Monopterus_albus
ENSGACG00000000235	tsn	97	78.378	ENSMUSG00000026374	Tsn	97	78.378	Mus_musculus
ENSGACG00000000235	tsn	97	78.378	MGP_PahariEiJ_G0027742	Tsn	97	78.378	Mus_pahari
ENSGACG00000000235	tsn	97	78.378	MGP_SPRETEiJ_G0015313	Tsn	97	78.378	Mus_spretus
ENSGACG00000000235	tsn	97	77.928	ENSMPUG00000001056	TSN	97	77.928	Mustela_putorius_furo
ENSGACG00000000235	tsn	88	80.000	ENSMLUG00000012656	TSN	97	80.000	Myotis_lucifugus
ENSGACG00000000235	tsn	97	78.378	ENSNGAG00000010353	Tsn	97	78.378	Nannospalax_galili
ENSGACG00000000235	tsn	98	92.070	ENSNBRG00000001193	tsn	100	92.070	Neolamprologus_brichardi
ENSGACG00000000235	tsn	97	78.378	ENSNLEG00000032773	TSN	97	78.378	Nomascus_leucogenys
ENSGACG00000000235	tsn	97	57.658	ENSMEUG00000006228	TSN	97	57.658	Notamacropus_eugenii
ENSGACG00000000235	tsn	60	67.647	ENSOPRG00000004858	-	96	67.647	Ochotona_princeps
ENSGACG00000000235	tsn	97	78.378	ENSODEG00000008386	-	97	78.378	Octodon_degus
ENSGACG00000000235	tsn	97	60.811	ENSODEG00000005998	-	97	60.811	Octodon_degus
ENSGACG00000000235	tsn	98	92.952	ENSONIG00000017060	tsn	100	92.952	Oreochromis_niloticus
ENSGACG00000000235	tsn	87	82.412	ENSOANG00000003457	TSN	97	82.090	Ornithorhynchus_anatinus
ENSGACG00000000235	tsn	97	78.378	ENSOCUG00000023529	TSN	97	78.378	Oryctolagus_cuniculus
ENSGACG00000000235	tsn	98	89.868	ENSORLG00000010049	tsn	100	89.868	Oryzias_latipes
ENSGACG00000000235	tsn	63	87.500	ENSORLG00020017000	-	84	87.500	Oryzias_latipes_hni
ENSGACG00000000235	tsn	97	91.403	ENSORLG00020016476	tsn	97	91.403	Oryzias_latipes_hni
ENSGACG00000000235	tsn	98	90.308	ENSORLG00015019192	tsn	100	90.308	Oryzias_latipes_hsok
ENSGACG00000000235	tsn	98	91.189	ENSOMEG00000016335	tsn	100	91.189	Oryzias_melastigma
ENSGACG00000000235	tsn	97	78.378	ENSOGAG00000030436	TSN	97	78.378	Otolemur_garnettii
ENSGACG00000000235	tsn	97	77.928	ENSOARG00000013339	TSN	97	77.928	Ovis_aries
ENSGACG00000000235	tsn	97	78.378	ENSPPAG00000032878	TSN	97	78.378	Pan_paniscus
ENSGACG00000000235	tsn	80	59.016	ENSPPRG00000004174	-	77	59.016	Panthera_pardus
ENSGACG00000000235	tsn	97	77.928	ENSPPRG00000006531	TSN	97	77.928	Panthera_pardus
ENSGACG00000000235	tsn	56	69.531	ENSPTIG00000012953	TSN	88	68.702	Panthera_tigris_altaica
ENSGACG00000000235	tsn	97	78.378	ENSPTRG00000012420	TSN	97	78.378	Pan_troglodytes
ENSGACG00000000235	tsn	97	78.378	ENSPANG00000000733	TSN	97	78.378	Papio_anubis
ENSGACG00000000235	tsn	96	88.182	ENSPKIG00000002005	tsn	97	88.182	Paramormyrops_kingsleyae
ENSGACG00000000235	tsn	74	83.333	ENSPSIG00000006064	TSN	92	83.333	Pelodiscus_sinensis
ENSGACG00000000235	tsn	97	92.760	ENSPMGG00000015287	tsn	99	91.150	Periophthalmus_magnuspinnatus
ENSGACG00000000235	tsn	96	67.580	ENSPMAG00000009161	tsn	99	65.652	Petromyzon_marinus
ENSGACG00000000235	tsn	88	81.592	ENSPCIG00000023491	TSN	97	81.500	Phascolarctos_cinereus
ENSGACG00000000235	tsn	98	90.308	ENSPFOG00000016063	tsn	100	90.308	Poecilia_formosa
ENSGACG00000000235	tsn	98	90.308	ENSPLAG00000010654	tsn	100	90.308	Poecilia_latipinna
ENSGACG00000000235	tsn	98	90.308	ENSPMEG00000023570	tsn	100	90.308	Poecilia_mexicana
ENSGACG00000000235	tsn	98	90.308	ENSPREG00000003481	tsn	100	90.308	Poecilia_reticulata
ENSGACG00000000235	tsn	97	78.378	ENSPPYG00000012774	TSN	97	78.378	Pongo_abelii
ENSGACG00000000235	tsn	74	80.357	ENSPCAG00000003549	TSN	97	80.357	Procavia_capensis
ENSGACG00000000235	tsn	97	78.378	ENSPCOG00000011045	TSN	97	78.378	Propithecus_coquereli
ENSGACG00000000235	tsn	97	77.928	ENSPVAG00000016702	TSN	97	77.928	Pteropus_vampyrus
ENSGACG00000000235	tsn	98	92.511	ENSPNYG00000012396	tsn	85	92.511	Pundamilia_nyererei
ENSGACG00000000235	tsn	98	88.546	ENSPNAG00000018140	tsn	100	88.546	Pygocentrus_nattereri
ENSGACG00000000235	tsn	97	78.378	ENSRNOG00000002319	Tsn	97	78.378	Rattus_norvegicus
ENSGACG00000000235	tsn	97	78.378	ENSRBIG00000041316	TSN	97	78.378	Rhinopithecus_bieti
ENSGACG00000000235	tsn	97	78.378	ENSRROG00000029954	TSN	97	78.378	Rhinopithecus_roxellana
ENSGACG00000000235	tsn	83	61.579	ENSSBOG00000015719	-	98	61.111	Saimiri_boliviensis_boliviensis
ENSGACG00000000235	tsn	97	78.378	ENSSBOG00000028579	TSN	97	78.378	Saimiri_boliviensis_boliviensis
ENSGACG00000000235	tsn	97	78.829	ENSSHAG00000011707	TSN	97	78.829	Sarcophilus_harrisii
ENSGACG00000000235	tsn	96	89.498	ENSSFOG00015020668	tsn	96	89.498	Scleropages_formosus
ENSGACG00000000235	tsn	98	88.987	ENSSMAG00000005822	tsn	100	88.987	Scophthalmus_maximus
ENSGACG00000000235	tsn	98	92.070	ENSSDUG00000011388	tsn	100	92.070	Seriola_dumerili
ENSGACG00000000235	tsn	98	92.070	ENSSLDG00000008206	tsn	100	92.070	Seriola_lalandi_dorsalis
ENSGACG00000000235	tsn	97	51.584	ENSSARG00000007193	-	97	51.584	Sorex_araneus
ENSGACG00000000235	tsn	98	78.947	ENSSPUG00000017518	TSN	100	78.947	Sphenodon_punctatus
ENSGACG00000000235	tsn	98	92.952	ENSSPAG00000009283	tsn	100	92.952	Stegastes_partitus
ENSGACG00000000235	tsn	97	78.281	ENSSSCG00000015729	TSN	97	80.402	Sus_scrofa
ENSGACG00000000235	tsn	97	79.186	ENSTGUG00000004445	TSN	99	77.729	Taeniopygia_guttata
ENSGACG00000000235	tsn	97	88.235	ENSTRUG00000013691	tsn	98	88.235	Takifugu_rubripes
ENSGACG00000000235	tsn	97	90.045	ENSTNIG00000015707	tsn	97	90.045	Tetraodon_nigroviridis
ENSGACG00000000235	tsn	97	78.378	ENSTBEG00000015319	TSN	97	78.378	Tupaia_belangeri
ENSGACG00000000235	tsn	97	77.928	ENSTTRG00000005854	TSN	97	77.928	Tursiops_truncatus
ENSGACG00000000235	tsn	97	77.928	ENSUAMG00000021618	TSN	97	77.928	Ursus_americanus
ENSGACG00000000235	tsn	97	76.577	ENSUMAG00000008516	TSN	97	76.577	Ursus_maritimus
ENSGACG00000000235	tsn	57	59.690	ENSVPAG00000009874	-	100	59.690	Vicugna_pacos
ENSGACG00000000235	tsn	88	80.000	ENSVVUG00000027555	TSN	96	80.000	Vulpes_vulpes
ENSGACG00000000235	tsn	96	75.909	ENSXETG00000000838	tsn	96	75.909	Xenopus_tropicalis
ENSGACG00000000235	tsn	54	87.903	ENSXCOG00000018514	tsn	95	87.903	Xiphophorus_couchianus
ENSGACG00000000235	tsn	98	90.308	ENSXMAG00000022538	tsn	100	90.308	Xiphophorus_maculatus