EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000261 (Gene tree)
Gene ID: -
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6025 bases
Position: chrscaffold_175:164811-170835
Accession: ZDB-GENE-021206-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000336	B3_4	PF03483.17	3.6e-28	1	1
ENSGACP00000000340	B3_4	PF03483.17	3.6e-28	1	1
ENSGACP00000000336	B5	PF03484.15	4.7e-14	1	1
ENSGACP00000000340	B5	PF03484.15	4.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000336	-	1650	-	ENSGACP00000000336	540 (aa)	-	G3N4W6
ENSGACT00000000340	-	1653	-	ENSGACP00000000340	547 (aa)	-	G3N4X0

Gene Model

Click here to download ENSGACG00000000261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000261's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000261	farsb	100	75.231	ENSG00000116120	FARSB	92	75.231	Homo_sapiens
ENSGACG00000000261	farsb	99	90.353	ENSAPOG00000013072	farsb	91	83.673	Acanthochromis_polyacanthus
ENSGACG00000000261	farsb	100	74.861	ENSAMEG00000005984	FARSB	92	74.861	Ailuropoda_melanoleuca
ENSGACG00000000261	farsb	99	84.601	ENSACIG00000021623	farsb	91	84.601	Amphilophus_citrinellus
ENSGACG00000000261	farsb	99	89.239	ENSAOCG00000004912	farsb	91	85.343	Amphiprion_ocellaris
ENSGACG00000000261	farsb	99	89.239	ENSAPEG00000001153	farsb	91	82.560	Amphiprion_percula
ENSGACG00000000261	farsb	99	89.610	ENSATEG00000021441	farsb	64	89.610	Anabas_testudineus
ENSGACG00000000261	farsb	99	74.719	ENSAPLG00000010292	FARSB	91	74.719	Anas_platyrhynchos
ENSGACG00000000261	farsb	99	76.252	ENSACAG00000004769	FARSB	90	76.252	Anolis_carolinensis
ENSGACG00000000261	farsb	100	74.307	ENSANAG00000024637	FARSB	92	74.307	Aotus_nancymaae
ENSGACG00000000261	farsb	99	89.610	ENSACLG00000013951	farsb	91	87.016	Astatotilapia_calliptera
ENSGACG00000000261	farsb	83	82.628	ENSAMXG00000033881	farsb	90	82.628	Astyanax_mexicanus
ENSGACG00000000261	farsb	100	75.601	ENSBTAG00000011649	FARSB	92	75.601	Bos_taurus
ENSGACG00000000261	farsb	95	74.225	ENSBTAG00000045523	-	91	74.225	Bos_taurus
ENSGACG00000000261	farsb	100	59.225	WBGene00001498	fars-3	92	59.225	Caenorhabditis_elegans
ENSGACG00000000261	farsb	100	75.046	ENSCJAG00000012181	FARSB	92	75.046	Callithrix_jacchus
ENSGACG00000000261	farsb	100	75.231	ENSCAFG00000016094	-	92	75.231	Canis_familiaris
ENSGACG00000000261	farsb	100	72.325	ENSCAFG00020026684	FARSB	91	74.563	Canis_lupus_dingo
ENSGACG00000000261	farsb	100	75.970	ENSCHIG00000014275	FARSB	92	75.970	Capra_hircus
ENSGACG00000000261	farsb	100	74.677	ENSTSYG00000008461	FARSB	92	74.677	Carlito_syrichta
ENSGACG00000000261	farsb	92	68.885	ENSCAPG00000016436	FARSB	89	68.885	Cavia_aperea
ENSGACG00000000261	farsb	100	74.677	ENSCPOG00000013109	FARSB	92	74.677	Cavia_porcellus
ENSGACG00000000261	farsb	100	70.610	ENSCCAG00000025840	FARSB	91	70.610	Cebus_capucinus
ENSGACG00000000261	farsb	100	75.046	ENSCATG00000036168	FARSB	92	75.046	Cercocebus_atys
ENSGACG00000000261	farsb	100	75.416	ENSCLAG00000011954	FARSB	92	75.416	Chinchilla_lanigera
ENSGACG00000000261	farsb	100	75.046	ENSCSAG00000007806	FARSB	92	75.046	Chlorocebus_sabaeus
ENSGACG00000000261	farsb	79	87.356	ENSCHOG00000011785	FARSB	72	87.356	Choloepus_hoffmanni
ENSGACG00000000261	farsb	99	76.623	ENSCPBG00000019346	FARSB	90	76.623	Chrysemys_picta_bellii
ENSGACG00000000261	farsb	99	61.931	ENSCING00000004180	-	92	61.931	Ciona_intestinalis
ENSGACG00000000261	farsb	99	62.842	ENSCSAVG00000005346	-	92	62.842	Ciona_savignyi
ENSGACG00000000261	farsb	96	74.856	ENSCANG00000036239	FARSB	91	74.856	Colobus_angolensis_palliatus
ENSGACG00000000261	farsb	100	75.786	ENSCGRG00001022928	Farsb	92	75.786	Cricetulus_griseus_chok1gshd
ENSGACG00000000261	farsb	100	75.786	ENSCGRG00000001513	Farsb	92	75.786	Cricetulus_griseus_crigri
ENSGACG00000000261	farsb	100	88.704	ENSCSEG00000005415	farsb	94	88.704	Cynoglossus_semilaevis
ENSGACG00000000261	farsb	83	83.333	ENSCVAG00000018815	farsb	98	83.333	Cyprinodon_variegatus
ENSGACG00000000261	farsb	99	83.704	ENSDARG00000016864	farsb	92	83.704	Danio_rerio
ENSGACG00000000261	farsb	100	74.307	ENSDNOG00000002511	FARSB	92	74.307	Dasypus_novemcinctus
ENSGACG00000000261	farsb	100	74.492	ENSDORG00000011102	Farsb	92	74.492	Dipodomys_ordii
ENSGACG00000000261	farsb	99	63.720	FBgn0039175	beta-PheRS	92	63.720	Drosophila_melanogaster
ENSGACG00000000261	farsb	96	73.462	ENSETEG00000015080	FARSB	91	73.462	Echinops_telfairi
ENSGACG00000000261	farsb	99	65.677	ENSEBUG00000006846	farsb	91	65.677	Eptatretus_burgeri
ENSGACG00000000261	farsb	100	75.231	ENSEASG00005011297	FARSB	92	75.231	Equus_asinus_asinus
ENSGACG00000000261	farsb	100	75.416	ENSECAG00000023086	FARSB	98	75.416	Equus_caballus
ENSGACG00000000261	farsb	90	64.754	ENSEEUG00000007441	FARSB	83	64.754	Erinaceus_europaeus
ENSGACG00000000261	farsb	96	86.564	ENSELUG00000014767	farsb	98	80.496	Esox_lucius
ENSGACG00000000261	farsb	100	75.416	ENSFCAG00000026772	FARSB	92	75.416	Felis_catus
ENSGACG00000000261	farsb	96	75.577	ENSFALG00000006739	FARSB	88	75.577	Ficedula_albicollis
ENSGACG00000000261	farsb	100	75.416	ENSFDAG00000008871	FARSB	92	75.416	Fukomys_damarensis
ENSGACG00000000261	farsb	99	88.868	ENSFHEG00000020939	farsb	97	88.868	Fundulus_heteroclitus
ENSGACG00000000261	farsb	100	85.185	ENSGMOG00000013047	farsb	100	85.185	Gadus_morhua
ENSGACG00000000261	farsb	100	75.556	ENSGALG00000005236	FARSB	92	75.556	Gallus_gallus
ENSGACG00000000261	farsb	99	85.900	ENSGAFG00000020900	farsb	91	79.633	Gambusia_affinis
ENSGACG00000000261	farsb	99	76.623	ENSGAGG00000016575	FARSB	90	76.623	Gopherus_agassizii
ENSGACG00000000261	farsb	99	89.796	ENSHBUG00000022379	farsb	91	86.642	Haplochromis_burtoni
ENSGACG00000000261	farsb	100	75.416	ENSHGLG00000015965	FARSB	92	75.416	Heterocephalus_glaber_female
ENSGACG00000000261	farsb	100	75.416	ENSHGLG00100001035	FARSB	92	75.416	Heterocephalus_glaber_male
ENSGACG00000000261	farsb	90	79.012	ENSHCOG00000016462	farsb	90	79.012	Hippocampus_comes
ENSGACG00000000261	farsb	99	84.045	ENSIPUG00000002754	farsb	92	84.045	Ictalurus_punctatus
ENSGACG00000000261	farsb	100	75.416	ENSSTOG00000016169	FARSB	92	75.416	Ictidomys_tridecemlineatus
ENSGACG00000000261	farsb	99	74.583	ENSJJAG00000003267	Farsb	91	74.583	Jaculus_jaculus
ENSGACG00000000261	farsb	99	79.151	ENSKMAG00000005363	farsb	91	79.151	Kryptolebias_marmoratus
ENSGACG00000000261	farsb	99	89.610	ENSLBEG00000018127	farsb	64	89.610	Labrus_bergylta
ENSGACG00000000261	farsb	99	79.406	ENSLACG00000002551	FARSB	99	79.406	Latimeria_chalumnae
ENSGACG00000000261	farsb	99	84.045	ENSLOCG00000004136	farsb	91	84.045	Lepisosteus_oculatus
ENSGACG00000000261	farsb	100	74.492	ENSLAFG00000015659	FARSB	92	74.492	Loxodonta_africana
ENSGACG00000000261	farsb	100	74.861	ENSMFAG00000036645	FARSB	92	74.861	Macaca_fascicularis
ENSGACG00000000261	farsb	100	72.274	ENSMMUG00000007685	FARSB	92	72.274	Macaca_mulatta
ENSGACG00000000261	farsb	100	74.677	ENSMNEG00000030672	FARSB	92	74.677	Macaca_nemestrina
ENSGACG00000000261	farsb	100	75.046	ENSMLEG00000042060	FARSB	92	75.046	Mandrillus_leucophaeus
ENSGACG00000000261	farsb	99	89.610	ENSMAMG00000011835	farsb	91	82.004	Mastacembelus_armatus
ENSGACG00000000261	farsb	95	86.990	ENSMZEG00005004544	farsb	91	86.990	Maylandia_zebra
ENSGACG00000000261	farsb	94	74.706	ENSMGAG00000004670	FARSB	91	74.706	Meleagris_gallopavo
ENSGACG00000000261	farsb	73	55.838	ENSMAUG00000017805	Farsb	91	55.838	Mesocricetus_auratus
ENSGACG00000000261	farsb	100	75.601	ENSMICG00000002495	FARSB	92	75.601	Microcebus_murinus
ENSGACG00000000261	farsb	100	76.111	ENSMOCG00000003181	Farsb	92	76.111	Microtus_ochrogaster
ENSGACG00000000261	farsb	99	79.035	ENSMMOG00000006265	farsb	91	79.035	Mola_mola
ENSGACG00000000261	farsb	100	77.222	ENSMODG00000021192	FARSB	92	77.222	Monodelphis_domestica
ENSGACG00000000261	farsb	99	90.167	ENSMALG00000021188	farsb	90	90.167	Monopterus_albus
ENSGACG00000000261	farsb	100	75.046	MGP_CAROLIEiJ_G0014310	Farsb	99	73.504	Mus_caroli
ENSGACG00000000261	farsb	100	75.231	ENSMUSG00000026245	Farsb	99	73.077	Mus_musculus
ENSGACG00000000261	farsb	100	75.046	MGP_PahariEiJ_G0027548	Farsb	99	73.077	Mus_pahari
ENSGACG00000000261	farsb	100	74.861	MGP_SPRETEiJ_G0015116	Farsb	99	72.650	Mus_spretus
ENSGACG00000000261	farsb	100	75.046	ENSMPUG00000016677	FARSB	92	75.046	Mustela_putorius_furo
ENSGACG00000000261	farsb	100	75.786	ENSMLUG00000010904	FARSB	92	75.786	Myotis_lucifugus
ENSGACG00000000261	farsb	100	74.815	ENSNGAG00000014602	Farsb	92	74.815	Nannospalax_galili
ENSGACG00000000261	farsb	99	89.610	ENSNBRG00000003198	farsb	91	83.889	Neolamprologus_brichardi
ENSGACG00000000261	farsb	100	75.231	ENSNLEG00000009638	FARSB	92	75.231	Nomascus_leucogenys
ENSGACG00000000261	farsb	100	66.296	ENSMEUG00000010798	FARSB	92	66.296	Notamacropus_eugenii
ENSGACG00000000261	farsb	100	55.268	ENSOPRG00000003292	FARSB	92	55.268	Ochotona_princeps
ENSGACG00000000261	farsb	100	75.416	ENSODEG00000005451	FARSB	92	75.416	Octodon_degus
ENSGACG00000000261	farsb	99	90.353	ENSONIG00000014639	farsb	92	90.353	Oreochromis_niloticus
ENSGACG00000000261	farsb	99	73.832	ENSOANG00000015387	FARSB	100	73.832	Ornithorhynchus_anatinus
ENSGACG00000000261	farsb	100	75.786	ENSOCUG00000007828	FARSB	95	75.786	Oryctolagus_cuniculus
ENSGACG00000000261	farsb	99	89.239	ENSORLG00000009135	farsb	91	86.271	Oryzias_latipes
ENSGACG00000000261	farsb	99	89.239	ENSORLG00015001072	farsb	91	77.551	Oryzias_latipes_hsok
ENSGACG00000000261	farsb	99	89.239	ENSOMEG00000019009	farsb	91	84.230	Oryzias_melastigma
ENSGACG00000000261	farsb	100	69.439	ENSOGAG00000010125	FARSB	92	69.439	Otolemur_garnettii
ENSGACG00000000261	farsb	100	75.970	ENSOARG00000020329	FARSB	92	75.970	Ovis_aries
ENSGACG00000000261	farsb	100	75.601	ENSPPAG00000039268	FARSB	92	75.601	Pan_paniscus
ENSGACG00000000261	farsb	100	75.231	ENSPPRG00000010687	FARSB	92	75.231	Panthera_pardus
ENSGACG00000000261	farsb	100	74.861	ENSPTIG00000004299	FARSB	92	74.861	Panthera_tigris_altaica
ENSGACG00000000261	farsb	100	75.601	ENSPTRG00000012974	FARSB	92	75.601	Pan_troglodytes
ENSGACG00000000261	farsb	100	75.046	ENSPANG00000016304	FARSB	92	75.046	Papio_anubis
ENSGACG00000000261	farsb	99	81.818	ENSPKIG00000006661	farsb	91	81.818	Paramormyrops_kingsleyae
ENSGACG00000000261	farsb	99	75.419	ENSPSIG00000006248	FARSB	91	75.419	Pelodiscus_sinensis
ENSGACG00000000261	farsb	81	87.927	ENSPMGG00000002815	farsb	90	87.927	Periophthalmus_magnuspinnatus
ENSGACG00000000261	farsb	100	75.416	ENSPEMG00000003131	Farsb	92	75.416	Peromyscus_maniculatus_bairdii
ENSGACG00000000261	farsb	100	77.037	ENSPCIG00000019458	FARSB	97	76.994	Phascolarctos_cinereus
ENSGACG00000000261	farsb	99	88.312	ENSPLAG00000001104	farsb	90	87.957	Poecilia_latipinna
ENSGACG00000000261	farsb	99	88.497	ENSPMEG00000017658	farsb	90	88.172	Poecilia_mexicana
ENSGACG00000000261	farsb	99	87.755	ENSPREG00000010583	farsb	91	87.526	Poecilia_reticulata
ENSGACG00000000261	farsb	100	75.231	ENSPPYG00000013221	FARSB	92	75.231	Pongo_abelii
ENSGACG00000000261	farsb	83	65.632	ENSPCAG00000002757	FARSB	77	65.632	Procavia_capensis
ENSGACG00000000261	farsb	54	85.714	ENSPCOG00000028852	FARSB	85	85.714	Propithecus_coquereli
ENSGACG00000000261	farsb	100	75.046	ENSPVAG00000006985	FARSB	92	75.046	Pteropus_vampyrus
ENSGACG00000000261	farsb	99	75.510	ENSPNYG00000011433	farsb	91	75.510	Pundamilia_nyererei
ENSGACG00000000261	farsb	99	84.416	ENSPNAG00000021802	farsb	92	84.416	Pygocentrus_nattereri
ENSGACG00000000261	farsb	100	75.046	ENSRNOG00000014119	Farsb	92	75.046	Rattus_norvegicus
ENSGACG00000000261	farsb	100	75.046	ENSRBIG00000033191	FARSB	97	75.046	Rhinopithecus_bieti
ENSGACG00000000261	farsb	100	75.046	ENSRROG00000029388	FARSB	92	75.046	Rhinopithecus_roxellana
ENSGACG00000000261	farsb	99	46.000	YLR060W	FRS1	90	46.000	Saccharomyces_cerevisiae
ENSGACG00000000261	farsb	100	66.913	ENSSBOG00000019084	FARSB	91	66.913	Saimiri_boliviensis_boliviensis
ENSGACG00000000261	farsb	100	71.325	ENSSHAG00000015752	FARSB	100	71.325	Sarcophilus_harrisii
ENSGACG00000000261	farsb	99	80.855	ENSSFOG00015007850	farsb	91	80.855	Scleropages_formosus
ENSGACG00000000261	farsb	99	90.167	ENSSMAG00000020668	farsb	91	87.384	Scophthalmus_maximus
ENSGACG00000000261	farsb	99	90.353	ENSSDUG00000009685	farsb	92	83.670	Seriola_dumerili
ENSGACG00000000261	farsb	99	90.538	ENSSLDG00000025206	farsb	91	84.230	Seriola_lalandi_dorsalis
ENSGACG00000000261	farsb	66	74.830	ENSSARG00000005655	-	66	74.830	Sorex_araneus
ENSGACG00000000261	farsb	91	76.721	ENSSPUG00000002245	FARSB	94	76.721	Sphenodon_punctatus
ENSGACG00000000261	farsb	99	90.353	ENSSPAG00000007367	farsb	63	90.353	Stegastes_partitus
ENSGACG00000000261	farsb	100	68.207	ENSSSCG00000032016	-	91	68.207	Sus_scrofa
ENSGACG00000000261	farsb	100	74.492	ENSSSCG00000016226	-	91	75.615	Sus_scrofa
ENSGACG00000000261	farsb	96	75.192	ENSTGUG00000007788	FARSB	91	75.192	Taeniopygia_guttata
ENSGACG00000000261	farsb	99	85.158	ENSTRUG00000009483	farsb	64	85.158	Takifugu_rubripes
ENSGACG00000000261	farsb	99	85.158	ENSTNIG00000014310	farsb	91	85.158	Tetraodon_nigroviridis
ENSGACG00000000261	farsb	99	50.741	ENSTBEG00000003136	FARSB	93	50.741	Tupaia_belangeri
ENSGACG00000000261	farsb	87	76.000	ENSTTRG00000009082	FARSB	80	76.000	Tursiops_truncatus
ENSGACG00000000261	farsb	83	70.133	ENSUAMG00000024613	FARSB	89	70.133	Ursus_americanus
ENSGACG00000000261	farsb	100	75.046	ENSUMAG00000017995	FARSB	92	75.046	Ursus_maritimus
ENSGACG00000000261	farsb	99	72.325	ENSVPAG00000006844	FARSB	100	72.325	Vicugna_pacos
ENSGACG00000000261	farsb	100	75.231	ENSVVUG00000024025	FARSB	92	75.231	Vulpes_vulpes
ENSGACG00000000261	farsb	99	75.926	ENSXETG00000002934	farsb	92	75.926	Xenopus_tropicalis
ENSGACG00000000261	farsb	99	87.570	ENSXMAG00000008280	farsb	90	82.822	Xiphophorus_maculatus