EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000448 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5644 bases
Position: chrscaffold_80:215862-221505
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000582	RRM_1	PF00076.22	3.1e-19	1	1
ENSGACP00000000580	RRM_1	PF00076.22	4.3e-19	1	1
ENSGACP00000000582	U1snRNP70_N	PF12220.8	3.1e-25	1	1
ENSGACP00000000580	U1snRNP70_N	PF12220.8	4.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000580	-	1311	-	ENSGACP00000000580	390 (aa)	-	G3N5K7
ENSGACT00000000582	-	966	-	ENSGACP00000000582	318 (aa)	-	G3N5K9

Gene Model

Click here to download ENSGACG00000000448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000448	snrnp70	70	91.928	ENSG00000104852	SNRNP70	99	88.415	Homo_sapiens
ENSGACG00000000448	snrnp70	70	87.946	ENSAMEG00000014468	SNRNP70	51	87.500	Ailuropoda_melanoleuca
ENSGACG00000000448	snrnp70	70	98.661	ENSAOCG00000011672	snrnp70	50	88.341	Amphiprion_ocellaris
ENSGACG00000000448	snrnp70	71	96.460	ENSATEG00000008748	snrnp70	74	73.988	Anabas_testudineus
ENSGACG00000000448	snrnp70	68	91.705	ENSACAG00000013276	SNRNP70	51	91.892	Anolis_carolinensis
ENSGACG00000000448	snrnp70	70	91.928	ENSANAG00000036787	SNRNP70	99	88.415	Aotus_nancymaae
ENSGACG00000000448	snrnp70	52	88.415	ENSBTAG00000048800	-	99	88.415	Bos_taurus
ENSGACG00000000448	snrnp70	63	52.475	WBGene00004390	rnp-7	57	48.454	Caenorhabditis_elegans
ENSGACG00000000448	snrnp70	70	91.928	ENSCJAG00000000193	SNRNP70	99	88.415	Callithrix_jacchus
ENSGACG00000000448	snrnp70	70	91.928	ENSCAFG00000003711	SNRNP70	99	88.415	Canis_familiaris
ENSGACG00000000448	snrnp70	70	88.889	ENSCAFG00020025470	SNRNP70	99	84.337	Canis_lupus_dingo
ENSGACG00000000448	snrnp70	52	88.415	ENSCHIG00000018534	-	99	88.415	Capra_hircus
ENSGACG00000000448	snrnp70	70	91.928	ENSCPOG00000019589	SNRNP70	51	91.928	Cavia_porcellus
ENSGACG00000000448	snrnp70	70	91.928	ENSCATG00000016149	SNRNP70	51	91.928	Cercocebus_atys
ENSGACG00000000448	snrnp70	70	91.928	ENSCLAG00000007991	SNRNP70	51	91.928	Chinchilla_lanigera
ENSGACG00000000448	snrnp70	68	91.667	ENSCSAG00000002759	SNRNP70	52	91.892	Chlorocebus_sabaeus
ENSGACG00000000448	snrnp70	68	91.705	ENSCPBG00000014841	SNRNP70	51	91.892	Chrysemys_picta_bellii
ENSGACG00000000448	snrnp70	64	67.476	ENSCSAVG00000010109	-	50	67.368	Ciona_savignyi
ENSGACG00000000448	snrnp70	70	91.928	ENSCANG00000036607	SNRNP70	90	91.928	Colobus_angolensis_palliatus
ENSGACG00000000448	snrnp70	70	91.928	ENSCGRG00001020676	Snrnp70	50	91.928	Cricetulus_griseus_chok1gshd
ENSGACG00000000448	snrnp70	70	91.928	ENSCGRG00000018048	Snrnp70	50	91.928	Cricetulus_griseus_crigri
ENSGACG00000000448	snrnp70	71	95.575	ENSCSEG00000011978	snrnp70	100	95.575	Cynoglossus_semilaevis
ENSGACG00000000448	snrnp70	50	94.969	ENSCVAG00000003912	snrnp70	99	94.969	Cyprinodon_variegatus
ENSGACG00000000448	snrnp70	70	94.196	ENSDARG00000077126	snrnp70	99	93.789	Danio_rerio
ENSGACG00000000448	snrnp70	52	88.415	ENSDNOG00000035849	-	99	88.415	Dasypus_novemcinctus
ENSGACG00000000448	snrnp70	70	91.928	ENSDORG00000010228	Snrnp70	50	91.928	Dipodomys_ordii
ENSGACG00000000448	snrnp70	70	91.928	ENSEASG00005004917	SNRNP70	51	91.928	Equus_asinus_asinus
ENSGACG00000000448	snrnp70	52	88.415	ENSECAG00000013936	-	99	88.415	Equus_caballus
ENSGACG00000000448	snrnp70	70	70.404	ENSEEUG00000005666	SNRNP70	51	70.404	Erinaceus_europaeus
ENSGACG00000000448	snrnp70	70	91.928	ENSFCAG00000042603	SNRNP70	53	91.928	Felis_catus
ENSGACG00000000448	snrnp70	70	91.928	ENSFDAG00000013830	SNRNP70	95	88.889	Fukomys_damarensis
ENSGACG00000000448	snrnp70	71	97.357	ENSGMOG00000011492	snrnp70	100	97.357	Gadus_morhua
ENSGACG00000000448	snrnp70	70	95.089	ENSGAFG00000003395	snrnp70	50	78.000	Gambusia_affinis
ENSGACG00000000448	snrnp70	50	73.333	ENSGAGG00000012628	SNRNP70	99	70.769	Gopherus_agassizii
ENSGACG00000000448	snrnp70	81	81.250	ENSGGOG00000008245	SNRNP70	99	88.415	Gorilla_gorilla
ENSGACG00000000448	snrnp70	52	88.415	ENSHGLG00100001651	-	99	88.415	Heterocephalus_glaber_male
ENSGACG00000000448	snrnp70	52	88.415	ENSSTOG00000013988	-	99	88.415	Ictidomys_tridecemlineatus
ENSGACG00000000448	snrnp70	70	91.928	ENSJJAG00000002614	Snrnp70	50	91.928	Jaculus_jaculus
ENSGACG00000000448	snrnp70	88	71.530	ENSLACG00000015684	SNRNP70	60	74.733	Latimeria_chalumnae
ENSGACG00000000448	snrnp70	70	91.928	ENSLAFG00000028536	SNRNP70	97	91.928	Loxodonta_africana
ENSGACG00000000448	snrnp70	70	91.928	ENSMFAG00000039824	SNRNP70	51	91.928	Macaca_fascicularis
ENSGACG00000000448	snrnp70	68	91.667	ENSMMUG00000004928	SNRNP70	99	88.415	Macaca_mulatta
ENSGACG00000000448	snrnp70	70	91.928	ENSMNEG00000038057	SNRNP70	52	91.928	Macaca_nemestrina
ENSGACG00000000448	snrnp70	70	91.928	ENSMLEG00000030967	SNRNP70	51	91.928	Mandrillus_leucophaeus
ENSGACG00000000448	snrnp70	70	91.928	ENSMAUG00000020970	Snrnp70	50	91.928	Mesocricetus_auratus
ENSGACG00000000448	snrnp70	77	85.306	ENSMICG00000038437	SNRNP70	99	88.415	Microcebus_murinus
ENSGACG00000000448	snrnp70	70	91.928	ENSMOCG00000012825	Snrnp70	50	91.928	Microtus_ochrogaster
ENSGACG00000000448	snrnp70	71	96.035	ENSMMOG00000005467	snrnp70	50	95.614	Mola_mola
ENSGACG00000000448	snrnp70	70	91.928	MGP_CAROLIEiJ_G0029714	Snrnp70	100	90.826	Mus_caroli
ENSGACG00000000448	snrnp70	70	91.928	ENSMUSG00000063511	Snrnp70	100	90.826	Mus_musculus
ENSGACG00000000448	snrnp70	70	91.928	MGP_PahariEiJ_G0012939	Snrnp70	100	90.826	Mus_pahari
ENSGACG00000000448	snrnp70	70	91.928	MGP_SPRETEiJ_G0030812	Snrnp70	100	90.826	Mus_spretus
ENSGACG00000000448	snrnp70	70	91.928	ENSMPUG00000003258	SNRNP70	51	91.928	Mustela_putorius_furo
ENSGACG00000000448	snrnp70	70	91.928	ENSMLUG00000011766	SNRNP70	51	91.928	Myotis_lucifugus
ENSGACG00000000448	snrnp70	70	91.928	ENSNGAG00000021191	Snrnp70	95	88.889	Nannospalax_galili
ENSGACG00000000448	snrnp70	71	96.903	ENSNBRG00000003126	snrnp70	97	96.903	Neolamprologus_brichardi
ENSGACG00000000448	snrnp70	79	80.800	ENSNLEG00000004899	SNRNP70	87	91.705	Nomascus_leucogenys
ENSGACG00000000448	snrnp70	71	96.460	ENSONIG00000007822	snrnp70	53	96.460	Oreochromis_niloticus
ENSGACG00000000448	snrnp70	71	89.823	ENSOANG00000005213	SNRNP70	99	89.823	Ornithorhynchus_anatinus
ENSGACG00000000448	snrnp70	70	91.518	ENSOGAG00000029310	SNRNP70	51	89.732	Otolemur_garnettii
ENSGACG00000000448	snrnp70	70	91.892	ENSOARG00000012608	SNRNP70	60	91.892	Ovis_aries
ENSGACG00000000448	snrnp70	70	91.928	ENSPPAG00000035067	SNRNP70	99	88.415	Pan_paniscus
ENSGACG00000000448	snrnp70	70	91.928	ENSPPRG00000005579	SNRNP70	51	91.928	Panthera_pardus
ENSGACG00000000448	snrnp70	70	91.928	ENSPTRG00000011277	SNRNP70	99	88.415	Pan_troglodytes
ENSGACG00000000448	snrnp70	70	91.928	ENSPANG00000004068	SNRNP70	51	91.928	Papio_anubis
ENSGACG00000000448	snrnp70	51	83.333	ENSPKIG00000019992	snrnp70	86	83.333	Paramormyrops_kingsleyae
ENSGACG00000000448	snrnp70	70	80.357	ENSPSIG00000015251	SNRNP70	88	80.631	Pelodiscus_sinensis
ENSGACG00000000448	snrnp70	51	95.031	ENSPMGG00000010153	snrnp70	77	95.031	Periophthalmus_magnuspinnatus
ENSGACG00000000448	snrnp70	70	91.928	ENSPEMG00000019011	Snrnp70	50	91.928	Peromyscus_maniculatus_bairdii
ENSGACG00000000448	snrnp70	61	80.829	ENSPMAG00000008502	snrnp70	98	80.423	Petromyzon_marinus
ENSGACG00000000448	snrnp70	68	91.705	ENSPCIG00000007296	SNRNP70	52	91.892	Phascolarctos_cinereus
ENSGACG00000000448	snrnp70	70	91.480	ENSPPYG00000010234	SNRNP70	51	91.480	Pongo_abelii
ENSGACG00000000448	snrnp70	70	83.408	ENSPCOG00000023103	SNRNP70	79	83.408	Propithecus_coquereli
ENSGACG00000000448	snrnp70	70	85.650	ENSPVAG00000009578	SNRNP70	51	85.650	Pteropus_vampyrus
ENSGACG00000000448	snrnp70	70	91.928	ENSRBIG00000042387	SNRNP70	83	91.928	Rhinopithecus_bieti
ENSGACG00000000448	snrnp70	70	91.928	ENSRROG00000033636	SNRNP70	83	91.928	Rhinopithecus_roxellana
ENSGACG00000000448	snrnp70	56	32.275	YIL061C	SNP1	63	30.256	Saccharomyces_cerevisiae
ENSGACG00000000448	snrnp70	70	91.928	ENSSBOG00000020026	SNRNP70	99	88.415	Saimiri_boliviensis_boliviensis
ENSGACG00000000448	snrnp70	68	91.705	ENSSHAG00000002194	SNRNP70	52	91.892	Sarcophilus_harrisii
ENSGACG00000000448	snrnp70	71	97.345	ENSSMAG00000013978	snrnp70	58	75.197	Scophthalmus_maximus
ENSGACG00000000448	snrnp70	79	86.800	ENSSPUG00000016621	SNRNP70	52	93.243	Sphenodon_punctatus
ENSGACG00000000448	snrnp70	52	88.415	ENSSSCG00000023792	-	99	88.415	Sus_scrofa
ENSGACG00000000448	snrnp70	70	91.928	ENSTTRG00000017099	SNRNP70	51	91.928	Tursiops_truncatus
ENSGACG00000000448	snrnp70	70	91.928	ENSUAMG00000016147	SNRNP70	51	91.928	Ursus_americanus
ENSGACG00000000448	snrnp70	70	91.928	ENSUMAG00000001467	SNRNP70	99	88.415	Ursus_maritimus
ENSGACG00000000448	snrnp70	69	78.733	ENSVPAG00000005959	-	100	78.733	Vicugna_pacos
ENSGACG00000000448	snrnp70	70	91.928	ENSVVUG00000022976	SNRNP70	99	88.415	Vulpes_vulpes
ENSGACG00000000448	snrnp70	72	88.210	ENSXETG00000022919	snrnp70	56	90.541	Xenopus_tropicalis