EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000000540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 7230 bases
Position: chrscaffold_298:13086-20315
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000693	Exo_endo_phos	PF03372.23	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000693	-	7101	-	ENSGACP00000000693	2367 (aa)	-	G3N5W9

Gene Model

Click here to download ENSGACG00000000540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000000540	-	100	88.015	ENSGACG00000000857	-	100	88.015
ENSGACG00000000540	-	100	95.144	ENSGACG00000000172	-	100	95.144
ENSGACG00000000540	-	100	93.428	ENSGACG00000019238	-	100	94.349
ENSGACG00000000540	-	88	95.401	ENSGACG00000002598	-	96	95.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000540	-	76	77.333	ENSACLG00000007543	-	99	77.333	Astatotilapia_calliptera
ENSGACG00000000540	-	99	48.878	ENSACLG00000016866	-	95	49.101	Astatotilapia_calliptera
ENSGACG00000000540	-	100	70.037	ENSACLG00000019297	-	95	70.037	Astatotilapia_calliptera
ENSGACG00000000540	-	100	69.689	ENSACLG00000019579	-	95	69.648	Astatotilapia_calliptera
ENSGACG00000000540	-	100	68.618	ENSACLG00000014925	-	95	68.921	Astatotilapia_calliptera
ENSGACG00000000540	-	100	69.681	ENSACLG00000014666	-	95	69.681	Astatotilapia_calliptera
ENSGACG00000000540	-	99	62.317	ENSACLG00000007512	-	95	62.358	Astatotilapia_calliptera
ENSGACG00000000540	-	100	64.896	ENSORLG00000028050	-	95	64.525	Oryzias_latipes
ENSGACG00000000540	-	100	57.227	ENSOMEG00000007870	-	91	64.116	Oryzias_melastigma
ENSGACG00000000540	-	95	64.226	ENSOMEG00000021040	-	99	64.226	Oryzias_melastigma
ENSGACG00000000540	-	100	46.928	ENSXMAG00000025456	-	83	49.855	Xiphophorus_maculatus
ENSGACG00000000540	-	100	49.662	ENSXMAG00000026285	-	99	50.551	Xiphophorus_maculatus
ENSGACG00000000540	-	100	46.573	ENSXMAG00000026498	-	99	50.342	Xiphophorus_maculatus
ENSGACG00000000540	-	100	49.662	ENSXMAG00000021109	-	99	50.551	Xiphophorus_maculatus