EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000586 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4197 bases
Position: chrscaffold_90:55223-59419
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000000758	RtcB	PF01139.17	1.1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000000758	-	1834	-	ENSGACP00000000758	505 (aa)	-	G3N634

Gene Model

Click here to download ENSGACG00000000586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000586	rtcb	100	93.861	ENSG00000100220	RTCB	100	93.861	Homo_sapiens
ENSGACG00000000586	rtcb	100	96.436	ENSAPOG00000006040	rtcb	100	96.436	Acanthochromis_polyacanthus
ENSGACG00000000586	rtcb	100	93.861	ENSAMEG00000016152	RTCB	100	93.861	Ailuropoda_melanoleuca
ENSGACG00000000586	rtcb	100	91.089	ENSACIG00000009083	rtcb	100	91.089	Amphilophus_citrinellus
ENSGACG00000000586	rtcb	100	96.832	ENSAOCG00000005662	rtcb	100	97.391	Amphiprion_ocellaris
ENSGACG00000000586	rtcb	100	96.832	ENSAPEG00000024701	rtcb	100	96.832	Amphiprion_percula
ENSGACG00000000586	rtcb	96	91.992	ENSAPEG00000024653	rtcb	100	91.992	Amphiprion_percula
ENSGACG00000000586	rtcb	100	96.436	ENSATEG00000000618	rtcb	100	96.436	Anabas_testudineus
ENSGACG00000000586	rtcb	100	89.981	ENSACAG00000014817	RTCB	100	89.981	Anolis_carolinensis
ENSGACG00000000586	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSGACG00000000586	rtcb	100	78.812	ENSANAG00000018191	-	91	78.812	Aotus_nancymaae
ENSGACG00000000586	rtcb	100	94.059	ENSACLG00000008367	rtcb	100	95.217	Astatotilapia_calliptera
ENSGACG00000000586	rtcb	100	95.842	ENSAMXG00000042320	rtcb	100	95.842	Astyanax_mexicanus
ENSGACG00000000586	rtcb	100	93.663	ENSBTAG00000011070	RTCB	100	93.663	Bos_taurus
ENSGACG00000000586	rtcb	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSGACG00000000586	rtcb	100	93.663	ENSCJAG00000006128	RTCB	100	93.663	Callithrix_jacchus
ENSGACG00000000586	rtcb	100	93.861	ENSCAFG00000001785	RTCB	100	93.861	Canis_familiaris
ENSGACG00000000586	rtcb	100	89.505	ENSCAFG00000010789	-	100	89.505	Canis_familiaris
ENSGACG00000000586	rtcb	100	93.861	ENSCAFG00020004890	-	100	93.861	Canis_lupus_dingo
ENSGACG00000000586	rtcb	87	89.773	ENSCAFG00020018953	-	99	89.773	Canis_lupus_dingo
ENSGACG00000000586	rtcb	100	93.663	ENSCHIG00000027009	-	100	93.663	Capra_hircus
ENSGACG00000000586	rtcb	100	94.059	ENSTSYG00000012320	RTCB	100	94.059	Carlito_syrichta
ENSGACG00000000586	rtcb	94	93.920	ENSCAPG00000011647	RTCB	96	93.920	Cavia_aperea
ENSGACG00000000586	rtcb	100	93.663	ENSCCAG00000000618	RTCB	100	93.663	Cebus_capucinus
ENSGACG00000000586	rtcb	100	93.663	ENSCATG00000033424	RTCB	100	93.663	Cercocebus_atys
ENSGACG00000000586	rtcb	100	93.465	ENSCLAG00000007997	RTCB	100	93.465	Chinchilla_lanigera
ENSGACG00000000586	rtcb	100	93.465	ENSCSAG00000008351	RTCB	100	93.465	Chlorocebus_sabaeus
ENSGACG00000000586	rtcb	100	79.802	ENSCHOG00000009123	RTCB	100	79.802	Choloepus_hoffmanni
ENSGACG00000000586	rtcb	100	93.267	ENSCPBG00000023184	RTCB	100	93.267	Chrysemys_picta_bellii
ENSGACG00000000586	rtcb	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSGACG00000000586	rtcb	100	81.980	ENSCSAVG00000008124	-	100	81.321	Ciona_savignyi
ENSGACG00000000586	rtcb	100	89.901	ENSCANG00000001891	RTCB	100	89.901	Colobus_angolensis_palliatus
ENSGACG00000000586	rtcb	100	93.861	ENSCGRG00001011173	Rtcb	100	93.861	Cricetulus_griseus_chok1gshd
ENSGACG00000000586	rtcb	93	94.468	ENSCGRG00000009587	-	96	94.468	Cricetulus_griseus_crigri
ENSGACG00000000586	rtcb	100	95.248	ENSCSEG00000003986	rtcb	100	95.248	Cynoglossus_semilaevis
ENSGACG00000000586	rtcb	82	94.712	ENSCVAG00000000569	rtcb	95	94.712	Cyprinodon_variegatus
ENSGACG00000000586	rtcb	100	96.832	ENSDARG00000101047	rtcb	100	96.832	Danio_rerio
ENSGACG00000000586	rtcb	80	90.172	ENSDNOG00000012425	RTCB	99	90.172	Dasypus_novemcinctus
ENSGACG00000000586	rtcb	100	93.861	ENSDORG00000010855	Rtcb	100	93.861	Dipodomys_ordii
ENSGACG00000000586	rtcb	99	84.095	FBgn0032781	RtcB	99	84.095	Drosophila_melanogaster
ENSGACG00000000586	rtcb	100	87.723	ENSETEG00000001988	RTCB	100	87.723	Echinops_telfairi
ENSGACG00000000586	rtcb	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
ENSGACG00000000586	rtcb	100	94.059	ENSEASG00005019059	RTCB	100	94.059	Equus_asinus_asinus
ENSGACG00000000586	rtcb	100	94.059	ENSECAG00000023998	RTCB	100	94.059	Equus_caballus
ENSGACG00000000586	rtcb	88	85.202	ENSEEUG00000006251	RTCB	99	85.202	Erinaceus_europaeus
ENSGACG00000000586	rtcb	100	83.932	ENSELUG00000009275	rtcb	100	83.932	Esox_lucius
ENSGACG00000000586	rtcb	100	93.861	ENSFCAG00000026480	RTCB	100	93.861	Felis_catus
ENSGACG00000000586	rtcb	100	94.257	ENSFALG00000013334	RTCB	100	94.257	Ficedula_albicollis
ENSGACG00000000586	rtcb	100	93.663	ENSFDAG00000018150	RTCB	100	93.663	Fukomys_damarensis
ENSGACG00000000586	rtcb	100	95.842	ENSFHEG00000009595	rtcb	100	95.842	Fundulus_heteroclitus
ENSGACG00000000586	rtcb	100	94.257	ENSGMOG00000018882	rtcb	100	94.257	Gadus_morhua
ENSGACG00000000586	rtcb	100	93.663	ENSGALG00000012611	RTCB	100	93.663	Gallus_gallus
ENSGACG00000000586	rtcb	100	95.446	ENSGAFG00000004198	rtcb	100	95.446	Gambusia_affinis
ENSGACG00000000586	rtcb	93	92.553	ENSGAGG00000019133	RTCB	98	92.553	Gopherus_agassizii
ENSGACG00000000586	rtcb	100	93.861	ENSGGOG00000011402	RTCB	100	93.861	Gorilla_gorilla
ENSGACG00000000586	rtcb	100	94.059	ENSHBUG00000020571	rtcb	100	94.059	Haplochromis_burtoni
ENSGACG00000000586	rtcb	93	67.804	ENSHGLG00000001066	-	99	67.804	Heterocephalus_glaber_female
ENSGACG00000000586	rtcb	100	93.663	ENSHGLG00000004492	RTCB	100	93.663	Heterocephalus_glaber_female
ENSGACG00000000586	rtcb	100	93.663	ENSHGLG00100008965	RTCB	100	93.663	Heterocephalus_glaber_male
ENSGACG00000000586	rtcb	100	94.083	ENSHCOG00000006450	rtcb	100	94.083	Hippocampus_comes
ENSGACG00000000586	rtcb	100	95.050	ENSIPUG00000015443	rtcb	100	95.050	Ictalurus_punctatus
ENSGACG00000000586	rtcb	100	93.465	ENSSTOG00000003878	RTCB	100	93.465	Ictidomys_tridecemlineatus
ENSGACG00000000586	rtcb	100	94.257	ENSJJAG00000010667	Rtcb	100	94.257	Jaculus_jaculus
ENSGACG00000000586	rtcb	100	95.446	ENSKMAG00000013178	rtcb	100	95.446	Kryptolebias_marmoratus
ENSGACG00000000586	rtcb	100	96.832	ENSLBEG00000010566	RTCB	100	96.832	Labrus_bergylta
ENSGACG00000000586	rtcb	100	95.644	ENSLBEG00000000214	rtcb	100	95.644	Labrus_bergylta
ENSGACG00000000586	rtcb	100	94.059	ENSLACG00000013033	RTCB	100	94.059	Latimeria_chalumnae
ENSGACG00000000586	rtcb	100	96.634	ENSLOCG00000016515	rtcb	99	96.634	Lepisosteus_oculatus
ENSGACG00000000586	rtcb	100	93.465	ENSLAFG00000002082	RTCB	100	93.465	Loxodonta_africana
ENSGACG00000000586	rtcb	100	93.465	ENSMFAG00000034419	RTCB	100	93.465	Macaca_fascicularis
ENSGACG00000000586	rtcb	100	93.465	ENSMMUG00000006720	RTCB	100	93.465	Macaca_mulatta
ENSGACG00000000586	rtcb	100	93.465	ENSMNEG00000040669	RTCB	100	93.465	Macaca_nemestrina
ENSGACG00000000586	rtcb	100	93.663	ENSMLEG00000040505	RTCB	100	93.663	Mandrillus_leucophaeus
ENSGACG00000000586	rtcb	100	96.040	ENSMAMG00000020676	rtcb	100	96.040	Mastacembelus_armatus
ENSGACG00000000586	rtcb	100	94.059	ENSMZEG00005018942	rtcb	100	94.059	Maylandia_zebra
ENSGACG00000000586	rtcb	100	93.294	ENSMGAG00000012805	RTCB	100	93.294	Meleagris_gallopavo
ENSGACG00000000586	rtcb	60	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSGACG00000000586	rtcb	100	74.851	ENSMICG00000036677	-	100	74.851	Microcebus_murinus
ENSGACG00000000586	rtcb	100	93.663	ENSMICG00000013303	-	100	93.663	Microcebus_murinus
ENSGACG00000000586	rtcb	100	94.257	ENSMOCG00000002440	Rtcb	100	94.257	Microtus_ochrogaster
ENSGACG00000000586	rtcb	100	96.238	ENSMMOG00000005987	rtcb	100	96.238	Mola_mola
ENSGACG00000000586	rtcb	100	94.257	ENSMODG00000001414	RTCB	100	94.257	Monodelphis_domestica
ENSGACG00000000586	rtcb	100	95.842	ENSMALG00000007603	rtcb	100	95.842	Monopterus_albus
ENSGACG00000000586	rtcb	100	93.861	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.861	Mus_caroli
ENSGACG00000000586	rtcb	100	93.861	ENSMUSG00000001783	Rtcb	100	93.861	Mus_musculus
ENSGACG00000000586	rtcb	100	93.861	MGP_PahariEiJ_G0031396	Rtcb	100	93.861	Mus_pahari
ENSGACG00000000586	rtcb	100	93.861	MGP_SPRETEiJ_G0016507	Rtcb	100	93.861	Mus_spretus
ENSGACG00000000586	rtcb	100	93.861	ENSMPUG00000012285	RTCB	100	93.861	Mustela_putorius_furo
ENSGACG00000000586	rtcb	100	91.124	ENSMLUG00000007803	RTCB	100	91.124	Myotis_lucifugus
ENSGACG00000000586	rtcb	72	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSGACG00000000586	rtcb	100	94.257	ENSNBRG00000017202	rtcb	100	94.257	Neolamprologus_brichardi
ENSGACG00000000586	rtcb	100	93.861	ENSNLEG00000004960	RTCB	100	93.861	Nomascus_leucogenys
ENSGACG00000000586	rtcb	100	70.891	ENSMEUG00000007809	-	100	70.891	Notamacropus_eugenii
ENSGACG00000000586	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSGACG00000000586	rtcb	82	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSGACG00000000586	rtcb	100	61.980	ENSODEG00000005042	-	100	61.980	Octodon_degus
ENSGACG00000000586	rtcb	100	95.446	ENSONIG00000007474	rtcb	100	95.446	Oreochromis_niloticus
ENSGACG00000000586	rtcb	100	94.059	ENSOANG00000005524	RTCB	100	94.059	Ornithorhynchus_anatinus
ENSGACG00000000586	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSGACG00000000586	rtcb	100	95.446	ENSORLG00000020093	rtcb	100	95.446	Oryzias_latipes
ENSGACG00000000586	rtcb	100	95.446	ENSORLG00020003706	rtcb	100	95.446	Oryzias_latipes_hni
ENSGACG00000000586	rtcb	100	95.644	ENSORLG00015002968	rtcb	100	95.644	Oryzias_latipes_hsok
ENSGACG00000000586	rtcb	100	95.050	ENSOMEG00000021278	rtcb	100	95.050	Oryzias_melastigma
ENSGACG00000000586	rtcb	100	93.069	ENSOGAG00000001425	RTCB	100	93.069	Otolemur_garnettii
ENSGACG00000000586	rtcb	100	93.663	ENSOARG00000018008	RTCB	100	93.663	Ovis_aries
ENSGACG00000000586	rtcb	100	93.861	ENSPPAG00000028667	RTCB	100	93.861	Pan_paniscus
ENSGACG00000000586	rtcb	100	93.861	ENSPPRG00000004038	RTCB	100	93.861	Panthera_pardus
ENSGACG00000000586	rtcb	94	89.684	ENSPTIG00000020499	RTCB	97	90.737	Panthera_tigris_altaica
ENSGACG00000000586	rtcb	100	93.861	ENSPTRG00000014287	RTCB	100	93.861	Pan_troglodytes
ENSGACG00000000586	rtcb	100	93.465	ENSPANG00000016035	RTCB	100	93.465	Papio_anubis
ENSGACG00000000586	rtcb	100	95.446	ENSPKIG00000001881	rtcb	100	95.446	Paramormyrops_kingsleyae
ENSGACG00000000586	rtcb	91	93.913	ENSPSIG00000011690	RTCB	100	93.913	Pelodiscus_sinensis
ENSGACG00000000586	rtcb	100	95.842	ENSPMGG00000016672	rtcb	100	95.842	Periophthalmus_magnuspinnatus
ENSGACG00000000586	rtcb	100	93.861	ENSPEMG00000019548	Rtcb	100	93.861	Peromyscus_maniculatus_bairdii
ENSGACG00000000586	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSGACG00000000586	rtcb	100	94.257	ENSPCIG00000009467	RTCB	100	94.257	Phascolarctos_cinereus
ENSGACG00000000586	rtcb	100	95.446	ENSPFOG00000003058	rtcb	100	95.446	Poecilia_formosa
ENSGACG00000000586	rtcb	100	95.644	ENSPLAG00000017663	rtcb	100	95.644	Poecilia_latipinna
ENSGACG00000000586	rtcb	100	95.446	ENSPMEG00000006227	rtcb	100	95.446	Poecilia_mexicana
ENSGACG00000000586	rtcb	100	95.248	ENSPREG00000018467	rtcb	100	95.248	Poecilia_reticulata
ENSGACG00000000586	rtcb	100	93.861	ENSPPYG00000011752	RTCB	100	93.861	Pongo_abelii
ENSGACG00000000586	rtcb	93	77.331	ENSPCAG00000013641	RTCB	100	77.331	Procavia_capensis
ENSGACG00000000586	rtcb	100	93.663	ENSPCOG00000017243	RTCB	100	93.663	Propithecus_coquereli
ENSGACG00000000586	rtcb	93	92.979	ENSPVAG00000002380	RTCB	100	92.979	Pteropus_vampyrus
ENSGACG00000000586	rtcb	100	94.059	ENSPNYG00000022760	rtcb	100	94.059	Pundamilia_nyererei
ENSGACG00000000586	rtcb	100	96.040	ENSPNAG00000009209	rtcb	100	96.040	Pygocentrus_nattereri
ENSGACG00000000586	rtcb	100	93.861	ENSRNOG00000004813	Rtcb	100	93.861	Rattus_norvegicus
ENSGACG00000000586	rtcb	100	85.771	ENSRBIG00000042090	RTCB	100	85.771	Rhinopithecus_bieti
ENSGACG00000000586	rtcb	100	88.911	ENSSBOG00000020085	-	100	88.911	Saimiri_boliviensis_boliviensis
ENSGACG00000000586	rtcb	94	94.093	ENSSHAG00000016277	RTCB	100	94.093	Sarcophilus_harrisii
ENSGACG00000000586	rtcb	100	95.050	ENSSFOG00015000763	rtcb	100	95.050	Scleropages_formosus
ENSGACG00000000586	rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSGACG00000000586	rtcb	100	93.861	ENSSMAG00000005096	rtcb	100	93.861	Scophthalmus_maximus
ENSGACG00000000586	rtcb	100	96.040	ENSSDUG00000012605	rtcb	100	96.040	Seriola_dumerili
ENSGACG00000000586	rtcb	100	96.040	ENSSLDG00000019458	rtcb	100	96.040	Seriola_lalandi_dorsalis
ENSGACG00000000586	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSGACG00000000586	rtcb	100	92.277	ENSSPUG00000012814	RTCB	100	92.277	Sphenodon_punctatus
ENSGACG00000000586	rtcb	100	96.832	ENSSPAG00000004623	rtcb	100	96.832	Stegastes_partitus
ENSGACG00000000586	rtcb	100	93.861	ENSSSCG00000000158	RTCB	100	93.861	Sus_scrofa
ENSGACG00000000586	rtcb	100	94.257	ENSTGUG00000010947	RTCB	99	94.257	Taeniopygia_guttata
ENSGACG00000000586	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSGACG00000000586	rtcb	100	96.040	ENSTNIG00000002484	rtcb	100	96.040	Tetraodon_nigroviridis
ENSGACG00000000586	rtcb	100	80.792	ENSTBEG00000004418	RTCB	100	80.792	Tupaia_belangeri
ENSGACG00000000586	rtcb	93	92.553	ENSTTRG00000006417	RTCB	100	92.553	Tursiops_truncatus
ENSGACG00000000586	rtcb	100	93.861	ENSUAMG00000022792	RTCB	100	93.861	Ursus_americanus
ENSGACG00000000586	rtcb	100	93.861	ENSUMAG00000017225	RTCB	100	93.861	Ursus_maritimus
ENSGACG00000000586	rtcb	100	93.663	ENSVPAG00000005375	RTCB	100	93.663	Vicugna_pacos
ENSGACG00000000586	rtcb	100	93.861	ENSVVUG00000023408	RTCB	100	94.103	Vulpes_vulpes
ENSGACG00000000586	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSGACG00000000586	rtcb	100	95.050	ENSXMAG00000002855	rtcb	100	95.050	Xiphophorus_maculatus