EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000802 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 936 bases
Position: chrscaffold_47:658836-659771
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001027	zf-CCCH	PF00642.24	7e-29	1	4
ENSGACP00000001027	zf-CCCH	PF00642.24	7e-29	2	4
ENSGACP00000001027	zf-CCCH	PF00642.24	7e-29	3	4
ENSGACP00000001027	zf-CCCH	PF00642.24	7e-29	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001027	-	876	-	ENSGACP00000001027	291 (aa)	-	G3N6V2

Gene Model

Click here to download ENSGACG00000000802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000802	cth1	88	67.391	ENSAPOG00000012552	cth1	99	69.550	Acanthochromis_polyacanthus
ENSGACG00000000802	cth1	87	65.328	ENSACIG00000016026	cth1	99	64.444	Amphilophus_citrinellus
ENSGACG00000000802	cth1	99	68.810	ENSAOCG00000001644	cth1	99	70.418	Amphiprion_ocellaris
ENSGACG00000000802	cth1	99	68.810	ENSAPEG00000008930	cth1	99	70.418	Amphiprion_percula
ENSGACG00000000802	cth1	99	70.186	ENSATEG00000002281	cth1	97	70.186	Anabas_testudineus
ENSGACG00000000802	cth1	89	61.765	ENSACLG00000015353	cth1	100	62.500	Astatotilapia_calliptera
ENSGACG00000000802	cth1	98	55.215	ENSAMXG00000025717	cth1	99	56.135	Astyanax_mexicanus
ENSGACG00000000802	cth1	99	65.000	ENSCSEG00000014617	cth1	99	65.938	Cynoglossus_semilaevis
ENSGACG00000000802	cth1	99	60.784	ENSCVAG00000001680	cth1	65	61.438	Cyprinodon_variegatus
ENSGACG00000000802	cth1	90	55.219	ENSDARG00000057328	cth1	99	55.828	Danio_rerio
ENSGACG00000000802	cth1	99	55.952	ENSELUG00000012738	cth1	99	55.952	Esox_lucius
ENSGACG00000000802	cth1	99	58.861	ENSFHEG00000022665	cth1	99	60.703	Fundulus_heteroclitus
ENSGACG00000000802	cth1	99	69.153	ENSGMOG00000007360	cth1	100	69.153	Gadus_morhua
ENSGACG00000000802	cth1	99	57.778	ENSGAFG00000019288	cth1	99	57.778	Gambusia_affinis
ENSGACG00000000802	cth1	99	62.376	ENSHBUG00000014400	cth1	99	62.623	Haplochromis_burtoni
ENSGACG00000000802	cth1	97	56.294	ENSHCOG00000010276	cth1	97	56.294	Hippocampus_comes
ENSGACG00000000802	cth1	96	56.151	ENSIPUG00000018040	cth1	95	56.151	Ictalurus_punctatus
ENSGACG00000000802	cth1	99	64.821	ENSKMAG00000005944	cth1	99	65.472	Kryptolebias_marmoratus
ENSGACG00000000802	cth1	99	69.524	ENSLBEG00000019253	cth1	99	69.841	Labrus_bergylta
ENSGACG00000000802	cth1	73	49.302	ENSLOCG00000002047	cth1	97	49.302	Lepisosteus_oculatus
ENSGACG00000000802	cth1	99	52.022	ENSMAMG00000001525	cth1	65	63.115	Mastacembelus_armatus
ENSGACG00000000802	cth1	99	62.046	ENSMZEG00005022335	cth1	99	62.295	Maylandia_zebra
ENSGACG00000000802	cth1	94	66.230	ENSMMOG00000020518	cth1	100	67.881	Mola_mola
ENSGACG00000000802	cth1	99	55.914	ENSMALG00000020738	cth1	65	63.600	Monopterus_albus
ENSGACG00000000802	cth1	88	61.049	ENSNBRG00000022789	cth1	88	61.338	Neolamprologus_brichardi
ENSGACG00000000802	cth1	99	64.356	ENSONIG00000021318	cth1	99	64.356	Oreochromis_niloticus
ENSGACG00000000802	cth1	99	60.133	ENSORLG00000022847	cth1	99	62.583	Oryzias_latipes
ENSGACG00000000802	cth1	99	60.465	ENSORLG00020011979	cth1	99	62.583	Oryzias_latipes_hni
ENSGACG00000000802	cth1	99	60.133	ENSORLG00015013084	cth1	99	62.583	Oryzias_latipes_hsok
ENSGACG00000000802	cth1	99	58.940	ENSOMEG00000005809	cth1	84	60.066	Oryzias_melastigma
ENSGACG00000000802	cth1	97	50.000	ENSPKIG00000015883	cth1	95	50.000	Paramormyrops_kingsleyae
ENSGACG00000000802	cth1	99	64.396	ENSPMGG00000004275	cth1	100	65.635	Periophthalmus_magnuspinnatus
ENSGACG00000000802	cth1	99	59.744	ENSPFOG00000013583	cth1	93	59.744	Poecilia_formosa
ENSGACG00000000802	cth1	99	59.875	ENSPLAG00000018158	cth1	93	59.875	Poecilia_latipinna
ENSGACG00000000802	cth1	99	59.494	ENSPMEG00000005744	cth1	99	59.494	Poecilia_mexicana
ENSGACG00000000802	cth1	99	60.064	ENSPREG00000004099	cth1	100	60.064	Poecilia_reticulata
ENSGACG00000000802	cth1	90	61.314	ENSPNYG00000016705	cth1	93	61.594	Pundamilia_nyererei
ENSGACG00000000802	cth1	98	55.963	ENSPNAG00000013147	cth1	97	55.963	Pygocentrus_nattereri
ENSGACG00000000802	cth1	94	51.645	ENSSFOG00015017190	cth1	94	51.645	Scleropages_formosus
ENSGACG00000000802	cth1	99	66.875	ENSSMAG00000007977	cth1	99	70.000	Scophthalmus_maximus
ENSGACG00000000802	cth1	99	68.807	ENSSDUG00000004321	cth1	99	70.031	Seriola_dumerili
ENSGACG00000000802	cth1	99	69.817	ENSSLDG00000012760	cth1	99	70.427	Seriola_lalandi_dorsalis
ENSGACG00000000802	cth1	99	70.122	ENSSLDG00000004516	-	99	70.732	Seriola_lalandi_dorsalis
ENSGACG00000000802	cth1	99	70.336	ENSSLDG00000010023	-	99	70.948	Seriola_lalandi_dorsalis
ENSGACG00000000802	cth1	99	64.873	ENSSPAG00000018659	cth1	99	68.354	Stegastes_partitus
ENSGACG00000000802	cth1	99	60.625	ENSTRUG00000012770	cth1	99	61.875	Takifugu_rubripes
ENSGACG00000000802	cth1	99	59.688	ENSTNIG00000000740	cth1	99	60.312	Tetraodon_nigroviridis
ENSGACG00000000802	cth1	81	61.181	ENSXCOG00000003710	cth1	88	61.181	Xiphophorus_couchianus
ENSGACG00000000802	cth1	99	59.683	ENSXMAG00000023885	cth1	99	59.683	Xiphophorus_maculatus