EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000000930 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7040 bases
Position: chrscaffold_27:2770085-2777124
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001204	THUMP	PF02926.17	2.8e-10	1	1
ENSGACP00000001207	THUMP	PF02926.17	3.2e-10	1	1
ENSGACP00000001204	UPF0020	PF01170.18	3.2e-39	1	1
ENSGACP00000001207	UPF0020	PF01170.18	3.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001204	-	1935	-	ENSGACP00000001204	469 (aa)	-	G3N7C7
ENSGACT00000001207	-	1881	-	ENSGACP00000001207	507 (aa)	-	G3N7D0

Gene Model

Click here to download ENSGACG00000000930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000000930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000000930	thumpd3	97	57.053	ENSG00000134077	THUMPD3	93	57.895	Homo_sapiens
ENSGACG00000000930	thumpd3	96	82.705	ENSAPOG00000015836	thumpd3	93	82.705	Acanthochromis_polyacanthus
ENSGACG00000000930	thumpd3	94	59.395	ENSAMEG00000011321	THUMPD3	91	59.827	Ailuropoda_melanoleuca
ENSGACG00000000930	thumpd3	99	82.403	ENSACIG00000020096	thumpd3	94	82.403	Amphilophus_citrinellus
ENSGACG00000000930	thumpd3	99	81.116	ENSAOCG00000004399	thumpd3	94	81.116	Amphiprion_ocellaris
ENSGACG00000000930	thumpd3	99	81.760	ENSAPEG00000016740	thumpd3	94	81.760	Amphiprion_percula
ENSGACG00000000930	thumpd3	99	80.645	ENSATEG00000005345	thumpd3	94	80.645	Anabas_testudineus
ENSGACG00000000930	thumpd3	80	62.755	ENSAPLG00000003598	THUMPD3	99	62.755	Anas_platyrhynchos
ENSGACG00000000930	thumpd3	92	60.254	ENSACAG00000014974	THUMPD3	91	60.677	Anolis_carolinensis
ENSGACG00000000930	thumpd3	96	56.568	ENSANAG00000002365	THUMPD3	93	57.839	Aotus_nancymaae
ENSGACG00000000930	thumpd3	99	81.760	ENSACLG00000023333	thumpd3	99	79.268	Astatotilapia_calliptera
ENSGACG00000000930	thumpd3	87	55.528	ENSACLG00000013504	-	86	55.528	Astatotilapia_calliptera
ENSGACG00000000930	thumpd3	98	68.522	ENSAMXG00000015683	thumpd3	98	68.522	Astyanax_mexicanus
ENSGACG00000000930	thumpd3	94	60.129	ENSBTAG00000003112	THUMPD3	91	61.087	Bos_taurus
ENSGACG00000000930	thumpd3	90	35.142	WBGene00010846	M04B2.2	96	35.377	Caenorhabditis_elegans
ENSGACG00000000930	thumpd3	96	56.144	ENSCJAG00000015949	THUMPD3	92	57.415	Callithrix_jacchus
ENSGACG00000000930	thumpd3	93	59.825	ENSCAFG00000005499	THUMPD3	93	58.163	Canis_familiaris
ENSGACG00000000930	thumpd3	78	57.364	ENSCAFG00000008060	-	93	58.656	Canis_familiaris
ENSGACG00000000930	thumpd3	84	58.034	ENSCAFG00020025887	-	95	59.233	Canis_lupus_dingo
ENSGACG00000000930	thumpd3	93	59.825	ENSCAFG00020008895	-	93	58.163	Canis_lupus_dingo
ENSGACG00000000930	thumpd3	94	60.043	ENSCHIG00000024037	THUMPD3	91	60.043	Capra_hircus
ENSGACG00000000930	thumpd3	96	57.113	ENSTSYG00000000159	THUMPD3	93	58.386	Carlito_syrichta
ENSGACG00000000930	thumpd3	90	40.888	ENSCAPG00000017486	THUMPD3	85	41.121	Cavia_aperea
ENSGACG00000000930	thumpd3	96	57.872	ENSCPOG00000033287	THUMPD3	92	58.723	Cavia_porcellus
ENSGACG00000000930	thumpd3	96	56.780	ENSCCAG00000027067	-	93	58.051	Cebus_capucinus
ENSGACG00000000930	thumpd3	96	51.055	ENSCCAG00000021429	-	92	52.106	Cebus_capucinus
ENSGACG00000000930	thumpd3	94	58.747	ENSCATG00000040999	THUMPD3	91	58.747	Cercocebus_atys
ENSGACG00000000930	thumpd3	94	58.658	ENSCLAG00000000690	THUMPD3	95	56.287	Chinchilla_lanigera
ENSGACG00000000930	thumpd3	94	58.747	ENSCSAG00000010753	THUMPD3	91	58.747	Chlorocebus_sabaeus
ENSGACG00000000930	thumpd3	82	47.967	ENSCHOG00000012851	THUMPD3	77	47.967	Choloepus_hoffmanni
ENSGACG00000000930	thumpd3	92	61.505	ENSCPBG00000014771	THUMPD3	91	61.688	Chrysemys_picta_bellii
ENSGACG00000000930	thumpd3	93	42.009	ENSCSAVG00000008668	-	97	42.009	Ciona_savignyi
ENSGACG00000000930	thumpd3	94	58.315	ENSCANG00000031901	THUMPD3	91	58.315	Colobus_angolensis_palliatus
ENSGACG00000000930	thumpd3	95	58.963	ENSCGRG00001024117	Thumpd3	92	58.963	Cricetulus_griseus_chok1gshd
ENSGACG00000000930	thumpd3	95	58.963	ENSCGRG00000018116	Thumpd3	92	58.963	Cricetulus_griseus_crigri
ENSGACG00000000930	thumpd3	99	76.445	ENSCSEG00000002546	thumpd3	96	76.445	Cynoglossus_semilaevis
ENSGACG00000000930	thumpd3	99	79.355	ENSCVAG00000001019	thumpd3	93	79.355	Cyprinodon_variegatus
ENSGACG00000000930	thumpd3	100	63.598	ENSDARG00000059634	thumpd3	99	63.598	Danio_rerio
ENSGACG00000000930	thumpd3	94	58.747	ENSDNOG00000047668	THUMPD3	89	59.395	Dasypus_novemcinctus
ENSGACG00000000930	thumpd3	93	59.170	ENSDORG00000003257	Thumpd3	90	59.389	Dipodomys_ordii
ENSGACG00000000930	thumpd3	61	55.700	ENSETEG00000020239	-	60	56.352	Echinops_telfairi
ENSGACG00000000930	thumpd3	91	51.454	ENSEBUG00000004221	thumpd3	97	51.454	Eptatretus_burgeri
ENSGACG00000000930	thumpd3	95	57.265	ENSEASG00005013327	THUMPD3	92	57.692	Equus_asinus_asinus
ENSGACG00000000930	thumpd3	95	59.402	ENSECAG00000002016	THUMPD3	92	59.829	Equus_caballus
ENSGACG00000000930	thumpd3	94	53.780	ENSEEUG00000014696	THUMPD3	91	54.644	Erinaceus_europaeus
ENSGACG00000000930	thumpd3	83	83.929	ENSELUG00000018246	thumpd3	93	64.672	Esox_lucius
ENSGACG00000000930	thumpd3	93	60.044	ENSFCAG00000006171	THUMPD3	90	60.044	Felis_catus
ENSGACG00000000930	thumpd3	87	58.257	ENSFALG00000013631	THUMPD3	90	58.756	Ficedula_albicollis
ENSGACG00000000930	thumpd3	97	56.632	ENSFDAG00000014825	THUMPD3	93	57.895	Fukomys_damarensis
ENSGACG00000000930	thumpd3	99	80.810	ENSFHEG00000006006	thumpd3	99	77.935	Fundulus_heteroclitus
ENSGACG00000000930	thumpd3	99	71.030	ENSGMOG00000007923	thumpd3	95	71.030	Gadus_morhua
ENSGACG00000000930	thumpd3	59	31.317	ENSGALG00000009119	THUMPD2	63	31.317	Gallus_gallus
ENSGACG00000000930	thumpd3	92	57.759	ENSGALG00000044813	THUMPD3	94	58.836	Gallus_gallus
ENSGACG00000000930	thumpd3	99	79.701	ENSGAFG00000021645	thumpd3	94	79.701	Gambusia_affinis
ENSGACG00000000930	thumpd3	93	61.853	ENSGAGG00000022750	THUMPD3	91	61.853	Gopherus_agassizii
ENSGACG00000000930	thumpd3	97	57.263	ENSGGOG00000000604	THUMPD3	93	58.105	Gorilla_gorilla
ENSGACG00000000930	thumpd3	99	81.760	ENSHBUG00000013405	thumpd3	99	79.268	Haplochromis_burtoni
ENSGACG00000000930	thumpd3	97	57.773	ENSHGLG00000016200	THUMPD3	93	58.017	Heterocephalus_glaber_female
ENSGACG00000000930	thumpd3	97	57.983	ENSHGLG00100017321	-	93	58.193	Heterocephalus_glaber_male
ENSGACG00000000930	thumpd3	93	51.101	ENSHGLG00100000505	-	93	52.203	Heterocephalus_glaber_male
ENSGACG00000000930	thumpd3	98	75.974	ENSHCOG00000004871	thumpd3	97	75.974	Hippocampus_comes
ENSGACG00000000930	thumpd3	95	70.444	ENSIPUG00000019415	THUMPD3	92	70.444	Ictalurus_punctatus
ENSGACG00000000930	thumpd3	96	58.723	ENSSTOG00000003973	THUMPD3	92	59.362	Ictidomys_tridecemlineatus
ENSGACG00000000930	thumpd3	97	52.720	ENSJJAG00000017751	Thumpd3	93	52.599	Jaculus_jaculus
ENSGACG00000000930	thumpd3	99	78.158	ENSKMAG00000021025	thumpd3	89	78.158	Kryptolebias_marmoratus
ENSGACG00000000930	thumpd3	99	81.935	ENSLBEG00000012252	thumpd3	99	79.837	Labrus_bergylta
ENSGACG00000000930	thumpd3	93	59.389	ENSLACG00000018604	THUMPD3	90	60.566	Latimeria_chalumnae
ENSGACG00000000930	thumpd3	96	60.772	ENSLOCG00000009800	thumpd3	95	63.441	Lepisosteus_oculatus
ENSGACG00000000930	thumpd3	96	59.873	ENSLAFG00000005103	THUMPD3	92	60.722	Loxodonta_africana
ENSGACG00000000930	thumpd3	93	59.170	ENSMFAG00000044884	THUMPD3	90	59.170	Macaca_fascicularis
ENSGACG00000000930	thumpd3	93	59.170	ENSMMUG00000017307	THUMPD3	90	59.170	Macaca_mulatta
ENSGACG00000000930	thumpd3	93	59.170	ENSMNEG00000030529	THUMPD3	90	59.170	Macaca_nemestrina
ENSGACG00000000930	thumpd3	94	58.747	ENSMLEG00000032943	THUMPD3	91	58.747	Mandrillus_leucophaeus
ENSGACG00000000930	thumpd3	99	80.258	ENSMAMG00000023934	thumpd3	99	77.393	Mastacembelus_armatus
ENSGACG00000000930	thumpd3	99	81.760	ENSMZEG00005010623	thumpd3	99	79.268	Maylandia_zebra
ENSGACG00000000930	thumpd3	82	60.652	ENSMGAG00000010182	THUMPD3	100	60.652	Meleagris_gallopavo
ENSGACG00000000930	thumpd3	94	59.179	ENSMAUG00000012250	Thumpd3	91	59.179	Mesocricetus_auratus
ENSGACG00000000930	thumpd3	92	56.410	ENSMICG00000010095	THUMPD3	89	56.838	Microcebus_murinus
ENSGACG00000000930	thumpd3	94	59.695	ENSMOCG00000020148	Thumpd3	91	59.695	Microtus_ochrogaster
ENSGACG00000000930	thumpd3	99	79.140	ENSMMOG00000021791	thumpd3	98	79.140	Mola_mola
ENSGACG00000000930	thumpd3	94	58.403	ENSMODG00000004715	-	92	58.761	Monodelphis_domestica
ENSGACG00000000930	thumpd3	94	81.777	ENSMALG00000017316	thumpd3	93	81.777	Monopterus_albus
ENSGACG00000000930	thumpd3	57	52.613	MGP_CAROLIEiJ_G0028714	-	59	52.613	Mus_caroli
ENSGACG00000000930	thumpd3	95	58.209	ENSMUSG00000030264	Thumpd3	93	58.298	Mus_musculus
ENSGACG00000000930	thumpd3	95	58.209	MGP_PahariEiJ_G0022465	Thumpd3	93	58.511	Mus_pahari
ENSGACG00000000930	thumpd3	95	58.209	MGP_SPRETEiJ_G0029742	Thumpd3	93	58.298	Mus_spretus
ENSGACG00000000930	thumpd3	94	59.611	ENSMPUG00000017066	-	92	58.761	Mustela_putorius_furo
ENSGACG00000000930	thumpd3	95	54.194	ENSMPUG00000005219	-	92	54.409	Mustela_putorius_furo
ENSGACG00000000930	thumpd3	96	58.140	ENSMLUG00000008538	THUMPD3	92	58.562	Myotis_lucifugus
ENSGACG00000000930	thumpd3	94	59.695	ENSNGAG00000021014	-	91	59.695	Nannospalax_galili
ENSGACG00000000930	thumpd3	94	49.666	ENSNGAG00000001549	-	90	49.889	Nannospalax_galili
ENSGACG00000000930	thumpd3	99	82.189	ENSNBRG00000004886	thumpd3	99	79.675	Neolamprologus_brichardi
ENSGACG00000000930	thumpd3	96	57.203	ENSNLEG00000003863	THUMPD3	93	58.051	Nomascus_leucogenys
ENSGACG00000000930	thumpd3	84	56.867	ENSMEUG00000009819	THUMPD3	98	58.252	Notamacropus_eugenii
ENSGACG00000000930	thumpd3	86	58.531	ENSOPRG00000002020	THUMPD3	99	59.059	Ochotona_princeps
ENSGACG00000000930	thumpd3	72	55.587	ENSODEG00000018242	THUMPD3	100	56.425	Octodon_degus
ENSGACG00000000930	thumpd3	99	82.403	ENSONIG00000018977	thumpd3	100	79.276	Oreochromis_niloticus
ENSGACG00000000930	thumpd3	84	55.422	ENSOANG00000014481	THUMPD3	97	56.627	Ornithorhynchus_anatinus
ENSGACG00000000930	thumpd3	97	59.408	ENSOCUG00000010921	THUMPD3	92	59.408	Oryctolagus_cuniculus
ENSGACG00000000930	thumpd3	98	78.571	ENSORLG00000000676	thumpd3	94	78.571	Oryzias_latipes
ENSGACG00000000930	thumpd3	98	79.221	ENSORLG00020007509	thumpd3	94	79.221	Oryzias_latipes_hni
ENSGACG00000000930	thumpd3	98	79.004	ENSORLG00015003615	thumpd3	94	79.004	Oryzias_latipes_hsok
ENSGACG00000000930	thumpd3	98	78.214	ENSOMEG00000014115	thumpd3	94	78.214	Oryzias_melastigma
ENSGACG00000000930	thumpd3	83	55.854	ENSOGAG00000017111	THUMPD3	99	57.317	Otolemur_garnettii
ENSGACG00000000930	thumpd3	94	59.179	ENSOARG00000007139	THUMPD3	89	60.043	Ovis_aries
ENSGACG00000000930	thumpd3	97	57.053	ENSPPAG00000025852	THUMPD3	93	57.895	Pan_paniscus
ENSGACG00000000930	thumpd3	93	60.262	ENSPPRG00000008071	THUMPD3	90	60.262	Panthera_pardus
ENSGACG00000000930	thumpd3	93	60.480	ENSPTIG00000017923	THUMPD3	90	60.480	Panthera_tigris_altaica
ENSGACG00000000930	thumpd3	97	57.263	ENSPTRG00000014585	THUMPD3	93	58.105	Pan_troglodytes
ENSGACG00000000930	thumpd3	94	58.531	ENSPANG00000016253	THUMPD3	91	58.531	Papio_anubis
ENSGACG00000000930	thumpd3	97	67.382	ENSPKIG00000014009	thumpd3	94	67.382	Paramormyrops_kingsleyae
ENSGACG00000000930	thumpd3	92	60.349	ENSPSIG00000007370	THUMPD3	90	60.349	Pelodiscus_sinensis
ENSGACG00000000930	thumpd3	95	78.378	ENSPMGG00000017563	thumpd3	93	78.378	Periophthalmus_magnuspinnatus
ENSGACG00000000930	thumpd3	95	59.395	ENSPEMG00000022411	Thumpd3	92	59.395	Peromyscus_maniculatus_bairdii
ENSGACG00000000930	thumpd3	93	53.258	ENSPMAG00000001291	thumpd3	99	54.157	Petromyzon_marinus
ENSGACG00000000930	thumpd3	95	58.105	ENSPCIG00000002049	THUMPD3	92	58.761	Phascolarctos_cinereus
ENSGACG00000000930	thumpd3	99	79.828	ENSPFOG00000002318	thumpd3	94	79.828	Poecilia_formosa
ENSGACG00000000930	thumpd3	99	79.828	ENSPLAG00000014804	thumpd3	94	79.828	Poecilia_latipinna
ENSGACG00000000930	thumpd3	99	79.828	ENSPMEG00000000582	thumpd3	94	79.828	Poecilia_mexicana
ENSGACG00000000930	thumpd3	99	80.000	ENSPREG00000009176	thumpd3	94	80.213	Poecilia_reticulata
ENSGACG00000000930	thumpd3	96	56.992	ENSPPYG00000029461	THUMPD3	93	57.839	Pongo_abelii
ENSGACG00000000930	thumpd3	91	45.602	ENSPPYG00000017616	-	89	45.602	Pongo_abelii
ENSGACG00000000930	thumpd3	85	59.005	ENSPCAG00000015398	THUMPD3	99	59.005	Procavia_capensis
ENSGACG00000000930	thumpd3	96	50.531	ENSPCOG00000018095	-	92	52.017	Propithecus_coquereli
ENSGACG00000000930	thumpd3	82	54.054	ENSPCOG00000023618	-	92	54.300	Propithecus_coquereli
ENSGACG00000000930	thumpd3	94	59.611	ENSPVAG00000008721	THUMPD3	91	60.043	Pteropus_vampyrus
ENSGACG00000000930	thumpd3	99	81.760	ENSPNYG00000006918	thumpd3	99	79.268	Pundamilia_nyererei
ENSGACG00000000930	thumpd3	95	70.089	ENSPNAG00000014936	thumpd3	93	70.089	Pygocentrus_nattereri
ENSGACG00000000930	thumpd3	94	58.824	ENSRNOG00000006941	Thumpd3	91	58.824	Rattus_norvegicus
ENSGACG00000000930	thumpd3	94	58.836	ENSRBIG00000035954	THUMPD3	92	58.836	Rhinopithecus_bieti
ENSGACG00000000930	thumpd3	94	58.621	ENSRROG00000035734	THUMPD3	92	58.621	Rhinopithecus_roxellana
ENSGACG00000000930	thumpd3	96	57.325	ENSSBOG00000023567	THUMPD3	93	58.599	Saimiri_boliviensis_boliviensis
ENSGACG00000000930	thumpd3	96	58.351	ENSSHAG00000014467	THUMPD3	93	58.774	Sarcophilus_harrisii
ENSGACG00000000930	thumpd3	96	69.048	ENSSFOG00015019210	thumpd3	93	69.048	Scleropages_formosus
ENSGACG00000000930	thumpd3	100	81.316	ENSSMAG00000000609	thumpd3	99	81.316	Scophthalmus_maximus
ENSGACG00000000930	thumpd3	99	83.691	ENSSDUG00000012179	thumpd3	98	83.691	Seriola_dumerili
ENSGACG00000000930	thumpd3	99	83.047	ENSSLDG00000022028	thumpd3	99	80.244	Seriola_lalandi_dorsalis
ENSGACG00000000930	thumpd3	80	63.636	ENSSARG00000002239	THUMPD3	78	63.636	Sorex_araneus
ENSGACG00000000930	thumpd3	92	59.871	ENSSPUG00000017461	THUMPD3	92	59.062	Sphenodon_punctatus
ENSGACG00000000930	thumpd3	99	81.897	ENSSPAG00000008345	thumpd3	92	81.897	Stegastes_partitus
ENSGACG00000000930	thumpd3	94	59.524	ENSSSCG00000011542	THUMPD3	91	60.304	Sus_scrofa
ENSGACG00000000930	thumpd3	91	60.179	ENSTGUG00000010440	THUMPD3	100	60.179	Taeniopygia_guttata
ENSGACG00000000930	thumpd3	99	69.444	ENSTRUG00000004420	thumpd3	97	69.444	Takifugu_rubripes
ENSGACG00000000930	thumpd3	97	78.242	ENSTNIG00000014627	thumpd3	98	78.414	Tetraodon_nigroviridis
ENSGACG00000000930	thumpd3	96	53.503	ENSTBEG00000003450	THUMPD3	92	54.352	Tupaia_belangeri
ENSGACG00000000930	thumpd3	94	60.784	ENSTTRG00000009694	THUMPD3	91	60.173	Tursiops_truncatus
ENSGACG00000000930	thumpd3	94	59.611	ENSUAMG00000009412	THUMPD3	91	59.827	Ursus_americanus
ENSGACG00000000930	thumpd3	95	61.693	ENSUMAG00000019241	THUMPD3	92	61.607	Ursus_maritimus
ENSGACG00000000930	thumpd3	77	56.883	ENSVPAG00000002855	THUMPD3	91	58.182	Vicugna_pacos
ENSGACG00000000930	thumpd3	93	59.607	ENSVVUG00000025278	THUMPD3	93	57.551	Vulpes_vulpes
ENSGACG00000000930	thumpd3	95	59.101	ENSXETG00000001447	thumpd3	91	59.101	Xenopus_tropicalis
ENSGACG00000000930	thumpd3	99	80.128	ENSXCOG00000000159	thumpd3	98	80.128	Xiphophorus_couchianus
ENSGACG00000000930	thumpd3	99	79.915	ENSXMAG00000001423	thumpd3	94	79.915	Xiphophorus_maculatus