EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001096 (Gene tree)
Gene ID: -
Gene Symbol: ercc6l
Alias: si:ch211-278b8.3
Full Name: excision repair cross-complementation group 6-like
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3961 bases
Position: chrscaffold_150:121502-125462
Accession: ZDB-GENE-060531-56
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001414	ResIII	PF04851.15	4.9e-13	1	1
ENSGACP00000001414	DEAD	PF00270.29	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001415	-	1722	-	ENSGACP00000001414	574 (aa)	-	G3N7Y0

Gene Model

Click here to download ENSGACG00000001096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001096	ercc6l	84	31.936	ENSGACG00000009128	rad54b	50	31.936
ENSGACG00000001096	ercc6l	83	31.579	ENSGACG00000003897	hells	58	31.758
ENSGACG00000001096	ercc6l	83	31.546	ENSGACG00000014042	chd1l	79	31.546
ENSGACG00000001096	ercc6l	80	31.237	ENSGACG00000007327	smarcad1a	54	30.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001096	ercc6l	96	76.993	ENSAPOG00000011392	ercc6l	81	76.993	Acanthochromis_polyacanthus
ENSGACG00000001096	ercc6l	96	81.341	ENSATEG00000012969	ercc6l	51	81.341	Anabas_testudineus
ENSGACG00000001096	ercc6l	87	64.529	ENSACAG00000028866	-	69	64.529	Anolis_carolinensis
ENSGACG00000001096	ercc6l	87	64.529	ENSACAG00000029354	-	71	64.529	Anolis_carolinensis
ENSGACG00000001096	ercc6l	82	35.818	ENSAMXG00000035908	-	91	35.818	Astyanax_mexicanus
ENSGACG00000001096	ercc6l	96	66.187	ENSCPBG00000011965	ERCC6L	77	68.421	Chrysemys_picta_bellii
ENSGACG00000001096	ercc6l	96	52.679	ENSCSAVG00000010291	-	97	52.679	Ciona_savignyi
ENSGACG00000001096	ercc6l	97	72.172	ENSCVAG00000008090	ercc6l	78	72.172	Cyprinodon_variegatus
ENSGACG00000001096	ercc6l	95	71.350	ENSFHEG00000007269	-	78	71.350	Fundulus_heteroclitus
ENSGACG00000001096	ercc6l	80	80.415	ENSGAFG00000020545	-	99	80.415	Gambusia_affinis
ENSGACG00000001096	ercc6l	96	79.964	ENSLBEG00000000091	ercc6l	55	80.144	Labrus_bergylta
ENSGACG00000001096	ercc6l	67	45.038	ENSLOCG00000017476	-	95	45.038	Lepisosteus_oculatus
ENSGACG00000001096	ercc6l	95	80.576	ENSMMOG00000020762	ercc6l	85	80.872	Mola_mola
ENSGACG00000001096	ercc6l	81	80.586	ENSORLG00000024240	ercc6l	72	80.586	Oryzias_latipes
ENSGACG00000001096	ercc6l	96	75.806	ENSORLG00020014999	ercc6l	50	75.806	Oryzias_latipes_hni
ENSGACG00000001096	ercc6l	68	83.750	ENSORLG00015007108	ercc6l	70	83.750	Oryzias_latipes_hsok
ENSGACG00000001096	ercc6l	96	75.763	ENSPMGG00000023343	ercc6l	53	76.029	Periophthalmus_magnuspinnatus
ENSGACG00000001096	ercc6l	97	59.337	ENSPMAG00000005064	ercc6l	78	59.337	Petromyzon_marinus
ENSGACG00000001096	ercc6l	100	73.514	ENSPLAG00000005575	ercc6l	51	76.965	Poecilia_latipinna
ENSGACG00000001096	ercc6l	93	78.519	ENSPREG00000017617	ercc6l	50	78.519	Poecilia_reticulata
ENSGACG00000001096	ercc6l	96	79.964	ENSPNYG00000013185	ercc6l	52	80.360	Pundamilia_nyererei
ENSGACG00000001096	ercc6l	57	44.444	ENSPNAG00000029823	-	79	44.444	Pygocentrus_nattereri
ENSGACG00000001096	ercc6l	95	68.603	ENSPNAG00000006556	ercc6l	51	64.883	Pygocentrus_nattereri
ENSGACG00000001096	ercc6l	96	62.455	ENSSHAG00000001331	-	51	62.455	Sarcophilus_harrisii
ENSGACG00000001096	ercc6l	97	78.799	ENSSLDG00000014910	ercc6l	51	78.799	Seriola_lalandi_dorsalis
ENSGACG00000001096	ercc6l	96	64.222	ENSSPUG00000005866	ERCC6L	51	64.222	Sphenodon_punctatus
ENSGACG00000001096	ercc6l	94	62.500	ENSTGUG00000004992	ERCC6L	99	62.877	Taeniopygia_guttata
ENSGACG00000001096	ercc6l	96	76.596	ENSTNIG00000001002	ercc6l	99	76.596	Tetraodon_nigroviridis
ENSGACG00000001096	ercc6l	92	72.128	ENSXCOG00000011494	ercc6l	73	72.128	Xiphophorus_couchianus
ENSGACG00000001096	ercc6l	96	77.917	ENSXMAG00000000948	ercc6l	53	77.917	Xiphophorus_maculatus