EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001100 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6283 bases
Position: chrscaffold_129:704-6986
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001428	ARS2	PF04959.13	1.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001429	-	2790	-	ENSGACP00000001428	872 (aa)	-	G3N7Z4
ENSGACT00000001423	-	2857	-	ENSGACP00000001422	395 (aa)	-	G3N7Y8

Gene Model

Click here to download ENSGACG00000001100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001100	-	53	63.158	ENSGACG00000020387	srrt	92	52.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001100	-	53	62.260	ENSG00000087087	SRRT	92	63.380	Homo_sapiens
ENSGACG00000001100	-	52	63.966	ENSAPOG00000002304	srrt	93	56.080	Acanthochromis_polyacanthus
ENSGACG00000001100	-	53	62.232	ENSAMEG00000014506	SRRT	92	52.195	Ailuropoda_melanoleuca
ENSGACG00000001100	-	85	64.009	ENSACIG00000015795	srrt	84	63.158	Amphilophus_citrinellus
ENSGACG00000001100	-	93	75.294	ENSAOCG00000009189	-	93	75.472	Amphiprion_ocellaris
ENSGACG00000001100	-	79	63.462	ENSAOCG00000009693	srrt	93	55.687	Amphiprion_ocellaris
ENSGACG00000001100	-	79	63.326	ENSAPEG00000003646	srrt	93	55.621	Amphiprion_percula
ENSGACG00000001100	-	93	75.294	ENSAPEG00000020016	-	93	75.472	Amphiprion_percula
ENSGACG00000001100	-	79	61.345	ENSATEG00000014425	srrt	93	52.921	Anabas_testudineus
ENSGACG00000001100	-	61	80.112	ENSATEG00000003652	-	96	78.625	Anabas_testudineus
ENSGACG00000001100	-	53	60.768	ENSACAG00000001014	SRRT	93	51.119	Anolis_carolinensis
ENSGACG00000001100	-	53	61.345	ENSANAG00000031718	SRRT	93	52.076	Aotus_nancymaae
ENSGACG00000001100	-	93	74.643	ENSACLG00000009423	-	93	73.561	Astatotilapia_calliptera
ENSGACG00000001100	-	52	63.793	ENSACLG00000013156	srrt	89	54.599	Astatotilapia_calliptera
ENSGACG00000001100	-	51	63.297	ENSAMXG00000016671	srrt	89	51.643	Astyanax_mexicanus
ENSGACG00000001100	-	53	61.555	ENSBTAG00000001134	SRRT	93	51.777	Bos_taurus
ENSGACG00000001100	-	57	41.969	WBGene00017085	E01A2.2	70	42.063	Caenorhabditis_elegans
ENSGACG00000001100	-	53	61.345	ENSCJAG00000014917	SRRT	93	51.586	Callithrix_jacchus
ENSGACG00000001100	-	96	53.182	ENSCAFG00000023538	SRRT	93	51.647	Canis_familiaris
ENSGACG00000001100	-	96	53.136	ENSCAFG00020013358	SRRT	97	50.713	Canis_lupus_dingo
ENSGACG00000001100	-	53	61.555	ENSCHIG00000010495	SRRT	93	51.777	Capra_hircus
ENSGACG00000001100	-	53	61.099	ENSTSYG00000036426	SRRT	97	49.296	Carlito_syrichta
ENSGACG00000001100	-	53	62.232	ENSCAPG00000013586	SRRT	93	55.533	Cavia_aperea
ENSGACG00000001100	-	53	61.216	ENSCPOG00000001739	SRRT	93	51.821	Cavia_porcellus
ENSGACG00000001100	-	53	61.345	ENSCCAG00000015877	SRRT	93	51.704	Cebus_capucinus
ENSGACG00000001100	-	53	61.345	ENSCATG00000036306	SRRT	94	51.865	Cercocebus_atys
ENSGACG00000001100	-	82	60.334	ENSCLAG00000007568	SRRT	94	55.311	Chinchilla_lanigera
ENSGACG00000001100	-	53	61.345	ENSCSAG00000017996	SRRT	93	51.765	Chlorocebus_sabaeus
ENSGACG00000001100	-	51	62.044	ENSCHOG00000007815	SRRT	63	66.393	Choloepus_hoffmanni
ENSGACG00000001100	-	68	60.648	ENSCPBG00000011553	SRRT	75	59.223	Chrysemys_picta_bellii
ENSGACG00000001100	-	100	38.245	ENSCING00000003506	-	53	48.807	Ciona_intestinalis
ENSGACG00000001100	-	100	37.820	ENSCSAVG00000008394	-	86	52.381	Ciona_savignyi
ENSGACG00000001100	-	53	61.311	ENSCANG00000034556	SRRT	93	51.953	Colobus_angolensis_palliatus
ENSGACG00000001100	-	53	60.924	ENSCGRG00001001594	Srrt	93	51.891	Cricetulus_griseus_chok1gshd
ENSGACG00000001100	-	72	63.483	ENSCGRG00000007292	Srrt	98	60.112	Cricetulus_griseus_crigri
ENSGACG00000001100	-	82	87.701	ENSCSEG00000005233	-	84	87.701	Cynoglossus_semilaevis
ENSGACG00000001100	-	96	52.601	ENSCSEG00000017878	srrt	93	51.243	Cynoglossus_semilaevis
ENSGACG00000001100	-	90	69.987	ENSCVAG00000017344	-	91	69.054	Cyprinodon_variegatus
ENSGACG00000001100	-	94	55.357	ENSCVAG00000019848	srrt	93	54.471	Cyprinodon_variegatus
ENSGACG00000001100	-	52	64.592	ENSDARG00000017762	srrt	92	55.662	Danio_rerio
ENSGACG00000001100	-	53	61.345	ENSDNOG00000003851	SRRT	93	51.882	Dasypus_novemcinctus
ENSGACG00000001100	-	53	61.653	ENSDORG00000005584	Srrt	93	55.601	Dipodomys_ordii
ENSGACG00000001100	-	73	50.253	FBgn0033062	Ars2	66	48.035	Drosophila_melanogaster
ENSGACG00000001100	-	74	59.091	ENSETEG00000016175	SRRT	70	57.540	Echinops_telfairi
ENSGACG00000001100	-	60	58.901	ENSEBUG00000008517	-	75	56.277	Eptatretus_burgeri
ENSGACG00000001100	-	53	61.345	ENSEASG00005016956	SRRT	93	51.605	Equus_asinus_asinus
ENSGACG00000001100	-	53	61.345	ENSECAG00000012292	SRRT	93	51.724	Equus_caballus
ENSGACG00000001100	-	54	72.107	ENSELUG00000021216	-	93	62.998	Esox_lucius
ENSGACG00000001100	-	52	65.665	ENSELUG00000006651	srrt	52	64.092	Esox_lucius
ENSGACG00000001100	-	53	61.555	ENSFCAG00000006855	SRRT	93	51.882	Felis_catus
ENSGACG00000001100	-	53	58.495	ENSFDAG00000021347	SRRT	93	52.990	Fukomys_damarensis
ENSGACG00000001100	-	54	71.130	ENSFHEG00000004105	-	96	70.062	Fundulus_heteroclitus
ENSGACG00000001100	-	73	65.534	ENSFHEG00000002756	srrt	82	65.385	Fundulus_heteroclitus
ENSGACG00000001100	-	79	77.113	ENSGMOG00000018694	-	81	79.720	Gadus_morhua
ENSGACG00000001100	-	95	52.894	ENSGMOG00000018619	srrt	92	51.020	Gadus_morhua
ENSGACG00000001100	-	93	69.767	ENSGAFG00000020383	-	93	69.315	Gambusia_affinis
ENSGACG00000001100	-	52	63.974	ENSGAFG00000005423	srrt	93	55.370	Gambusia_affinis
ENSGACG00000001100	-	53	61.345	ENSGGOG00000001508	SRRT	93	52.189	Gorilla_gorilla
ENSGACG00000001100	-	52	63.793	ENSHBUG00000002942	srrt	89	55.595	Haplochromis_burtoni
ENSGACG00000001100	-	96	53.022	ENSHGLG00000008344	Srrt	94	55.221	Heterocephalus_glaber_female
ENSGACG00000001100	-	96	53.502	ENSHGLG00100018857	Srrt	94	54.878	Heterocephalus_glaber_male
ENSGACG00000001100	-	93	67.118	ENSHCOG00000008904	-	93	66.749	Hippocampus_comes
ENSGACG00000001100	-	54	61.715	ENSHCOG00000005403	srrt	59	58.635	Hippocampus_comes
ENSGACG00000001100	-	52	63.283	ENSIPUG00000021150	srrt	93	54.112	Ictalurus_punctatus
ENSGACG00000001100	-	53	61.311	ENSSTOG00000013776	SRRT	93	51.948	Ictidomys_tridecemlineatus
ENSGACG00000001100	-	96	54.007	ENSJJAG00000010446	Srrt	94	55.781	Jaculus_jaculus
ENSGACG00000001100	-	93	71.362	ENSKMAG00000008468	-	93	71.651	Kryptolebias_marmoratus
ENSGACG00000001100	-	54	61.649	ENSKMAG00000013599	srrt	93	53.176	Kryptolebias_marmoratus
ENSGACG00000001100	-	66	68.770	ENSLBEG00000028983	-	55	74.462	Labrus_bergylta
ENSGACG00000001100	-	81	63.566	ENSLBEG00000016308	srrt	80	63.636	Labrus_bergylta
ENSGACG00000001100	-	94	43.981	ENSLACG00000001089	SRRT	92	45.335	Latimeria_chalumnae
ENSGACG00000001100	-	70	66.258	ENSLOCG00000013658	srrt	100	48.804	Lepisosteus_oculatus
ENSGACG00000001100	-	53	61.345	ENSLAFG00000007725	SRRT	93	51.939	Loxodonta_africana
ENSGACG00000001100	-	53	61.311	ENSMFAG00000033745	SRRT	97	51.865	Macaca_fascicularis
ENSGACG00000001100	-	53	61.345	ENSMMUG00000021255	SRRT	93	51.821	Macaca_mulatta
ENSGACG00000001100	-	53	61.345	ENSMNEG00000041864	SRRT	94	51.865	Macaca_nemestrina
ENSGACG00000001100	-	53	61.311	ENSMLEG00000029479	SRRT	95	51.405	Mandrillus_leucophaeus
ENSGACG00000001100	-	52	63.067	ENSMAMG00000014311	srrt	93	53.710	Mastacembelus_armatus
ENSGACG00000001100	-	93	77.170	ENSMAMG00000010681	-	93	76.576	Mastacembelus_armatus
ENSGACG00000001100	-	93	74.762	ENSMZEG00005028002	-	93	73.678	Maylandia_zebra
ENSGACG00000001100	-	52	63.793	ENSMZEG00005016135	srrt	89	54.599	Maylandia_zebra
ENSGACG00000001100	-	53	61.134	ENSMAUG00000011386	Srrt	94	55.040	Mesocricetus_auratus
ENSGACG00000001100	-	53	61.345	ENSMICG00000009471	SRRT	95	51.643	Microcebus_murinus
ENSGACG00000001100	-	53	60.924	ENSMOCG00000001971	Srrt	94	54.910	Microtus_ochrogaster
ENSGACG00000001100	-	83	70.461	ENSMMOG00000011137	-	88	71.448	Mola_mola
ENSGACG00000001100	-	95	56.257	ENSMMOG00000016399	srrt	81	65.550	Mola_mola
ENSGACG00000001100	-	53	59.916	ENSMODG00000004862	SRRT	92	58.776	Monodelphis_domestica
ENSGACG00000001100	-	88	52.218	ENSMALG00000018604	srrt	96	51.199	Monopterus_albus
ENSGACG00000001100	-	62	61.020	ENSMALG00000005567	-	87	60.451	Monopterus_albus
ENSGACG00000001100	-	53	61.834	MGP_CAROLIEiJ_G0027870	Srrt	90	60.408	Mus_caroli
ENSGACG00000001100	-	53	61.834	ENSMUSG00000037364	Srrt	90	60.408	Mus_musculus
ENSGACG00000001100	-	53	61.834	MGP_PahariEiJ_G0024456	Srrt	90	60.408	Mus_pahari
ENSGACG00000001100	-	53	61.834	MGP_SPRETEiJ_G0028875	Srrt	90	60.408	Mus_spretus
ENSGACG00000001100	-	53	61.345	ENSMPUG00000015839	SRRT	93	51.765	Mustela_putorius_furo
ENSGACG00000001100	-	53	61.134	ENSMLUG00000009975	SRRT	93	52.019	Myotis_lucifugus
ENSGACG00000001100	-	53	60.924	ENSNGAG00000023715	Srrt	93	51.412	Nannospalax_galili
ENSGACG00000001100	-	52	63.362	ENSNBRG00000019100	srrt	92	54.286	Neolamprologus_brichardi
ENSGACG00000001100	-	80	56.522	ENSNLEG00000011987	SRRT	97	49.052	Nomascus_leucogenys
ENSGACG00000001100	-	50	53.187	ENSMEUG00000011941	SRRT	55	48.687	Notamacropus_eugenii
ENSGACG00000001100	-	61	59.701	ENSOPRG00000002502	-	67	59.398	Ochotona_princeps
ENSGACG00000001100	-	53	62.017	ENSODEG00000016856	SRRT	93	55.306	Octodon_degus
ENSGACG00000001100	-	98	75.362	ENSONIG00000016080	-	93	73.740	Oreochromis_niloticus
ENSGACG00000001100	-	52	63.793	ENSONIG00000004242	srrt	93	54.206	Oreochromis_niloticus
ENSGACG00000001100	-	96	54.936	ENSORLG00000008120	srrt	93	52.700	Oryzias_latipes
ENSGACG00000001100	-	96	55.336	ENSORLG00020003058	srrt	93	52.582	Oryzias_latipes_hni
ENSGACG00000001100	-	96	55.336	ENSORLG00015008062	srrt	93	52.736	Oryzias_latipes_hsok
ENSGACG00000001100	-	96	55.324	ENSOMEG00000003155	srrt	86	62.201	Oryzias_melastigma
ENSGACG00000001100	-	98	71.068	ENSOMEG00000006963	-	93	70.723	Oryzias_melastigma
ENSGACG00000001100	-	53	61.345	ENSOGAG00000017242	SRRT	93	51.939	Otolemur_garnettii
ENSGACG00000001100	-	53	61.522	ENSOARG00000015645	SRRT	93	51.724	Ovis_aries
ENSGACG00000001100	-	53	61.311	ENSPPAG00000041090	SRRT	93	52.420	Pan_paniscus
ENSGACG00000001100	-	53	61.099	ENSPPRG00000009557	SRRT	93	52.000	Panthera_pardus
ENSGACG00000001100	-	53	61.555	ENSPTIG00000014355	SRRT	93	51.882	Panthera_tigris_altaica
ENSGACG00000001100	-	53	61.311	ENSPTRG00000019511	SRRT	98	49.942	Pan_troglodytes
ENSGACG00000001100	-	53	60.331	ENSPANG00000020763	SRRT	94	51.865	Papio_anubis
ENSGACG00000001100	-	96	55.723	ENSPKIG00000005434	srrt	92	53.341	Paramormyrops_kingsleyae
ENSGACG00000001100	-	52	64.946	ENSPKIG00000022212	-	93	54.038	Paramormyrops_kingsleyae
ENSGACG00000001100	-	53	60.944	ENSPSIG00000016311	SRRT	93	51.196	Pelodiscus_sinensis
ENSGACG00000001100	-	52	61.505	ENSPMGG00000002841	srrt	57	60.549	Periophthalmus_magnuspinnatus
ENSGACG00000001100	-	53	61.803	ENSPEMG00000010834	Srrt	94	54.767	Peromyscus_maniculatus_bairdii
ENSGACG00000001100	-	94	49.180	ENSPMAG00000009614	-	56	56.757	Petromyzon_marinus
ENSGACG00000001100	-	54	60.246	ENSPCIG00000000816	SRRT	93	51.294	Phascolarctos_cinereus
ENSGACG00000001100	-	84	80.995	ENSPFOG00000016554	-	93	69.841	Poecilia_formosa
ENSGACG00000001100	-	52	64.410	ENSPFOG00000005704	srrt	93	55.489	Poecilia_formosa
ENSGACG00000001100	-	51	80.361	ENSPLAG00000004526	-	93	69.634	Poecilia_latipinna
ENSGACG00000001100	-	94	55.542	ENSPLAG00000021992	srrt	93	54.893	Poecilia_latipinna
ENSGACG00000001100	-	74	65.500	ENSPMEG00000001182	srrt	93	55.675	Poecilia_mexicana
ENSGACG00000001100	-	81	79.714	ENSPMEG00000001520	-	90	68.983	Poecilia_mexicana
ENSGACG00000001100	-	94	55.608	ENSPREG00000022308	srrt	93	55.728	Poecilia_reticulata
ENSGACG00000001100	-	53	59.298	ENSPCAG00000001621	SRRT	93	50.469	Procavia_capensis
ENSGACG00000001100	-	53	61.345	ENSPCOG00000025751	SRRT	93	51.540	Propithecus_coquereli
ENSGACG00000001100	-	59	60.945	ENSPVAG00000000834	SRRT	100	45.288	Pteropus_vampyrus
ENSGACG00000001100	-	52	63.793	ENSPNYG00000018710	srrt	93	54.717	Pundamilia_nyererei
ENSGACG00000001100	-	72	61.111	ENSPNAG00000010629	srrt	91	41.754	Pygocentrus_nattereri
ENSGACG00000001100	-	53	51.805	ENSRNOG00000048277	AABR07035787.1	97	48.594	Rattus_norvegicus
ENSGACG00000001100	-	53	61.345	ENSRBIG00000035718	SRRT	94	51.865	Rhinopithecus_bieti
ENSGACG00000001100	-	53	61.345	ENSRROG00000030622	SRRT	95	51.865	Rhinopithecus_roxellana
ENSGACG00000001100	-	53	61.345	ENSSBOG00000033570	SRRT	94	51.651	Saimiri_boliviensis_boliviensis
ENSGACG00000001100	-	54	60.041	ENSSHAG00000007349	-	100	48.799	Sarcophilus_harrisii
ENSGACG00000001100	-	94	55.800	ENSSFOG00015017293	srrt	92	56.991	Scleropages_formosus
ENSGACG00000001100	-	51	82.444	ENSSMAG00000018195	-	93	70.424	Scophthalmus_maximus
ENSGACG00000001100	-	94	56.615	ENSSMAG00000015342	srrt	93	55.648	Scophthalmus_maximus
ENSGACG00000001100	-	52	62.447	ENSSDUG00000012049	srrt	92	53.754	Seriola_dumerili
ENSGACG00000001100	-	53	67.373	ENSSDUG00000002051	-	96	65.546	Seriola_dumerili
ENSGACG00000001100	-	79	63.057	ENSSLDG00000017477	srrt	80	64.593	Seriola_lalandi_dorsalis
ENSGACG00000001100	-	86	73.891	ENSSPAG00000018943	-	96	72.842	Stegastes_partitus
ENSGACG00000001100	-	52	64.043	ENSSPAG00000005665	srrt	91	55.726	Stegastes_partitus
ENSGACG00000001100	-	50	62.667	ENSSSCG00000024789	SRRT	98	51.140	Sus_scrofa
ENSGACG00000001100	-	90	70.750	ENSTRUG00000000023	-	91	69.240	Takifugu_rubripes
ENSGACG00000001100	-	52	62.924	ENSTRUG00000016075	srrt	93	53.301	Takifugu_rubripes
ENSGACG00000001100	-	93	69.065	ENSTNIG00000003111	-	93	68.825	Tetraodon_nigroviridis
ENSGACG00000001100	-	52	61.378	ENSTNIG00000011779	srrt	75	59.305	Tetraodon_nigroviridis
ENSGACG00000001100	-	53	61.345	ENSTTRG00000011104	SRRT	93	51.659	Tursiops_truncatus
ENSGACG00000001100	-	53	61.345	ENSUAMG00000027997	SRRT	95	51.962	Ursus_americanus
ENSGACG00000001100	-	53	61.345	ENSUMAG00000011295	SRRT	93	51.601	Ursus_maritimus
ENSGACG00000001100	-	96	53.182	ENSVVUG00000023572	SRRT	93	51.647	Vulpes_vulpes
ENSGACG00000001100	-	69	58.788	ENSXETG00000025124	srrt	78	57.778	Xenopus_tropicalis
ENSGACG00000001100	-	57	61.044	ENSXCOG00000013105	-	99	60.442	Xiphophorus_couchianus
ENSGACG00000001100	-	80	63.261	ENSXMAG00000007627	srrt	84	64.904	Xiphophorus_maculatus
ENSGACG00000001100	-	93	70.690	ENSXMAG00000002090	-	93	69.927	Xiphophorus_maculatus