EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 888 bases
Position: chrscaffold_146:178519-179406
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001509	zf-C2H2	PF00096.26	5.1e-24	1	3
ENSGACP00000001509	zf-C2H2	PF00096.26	5.1e-24	2	3
ENSGACP00000001509	zf-C2H2	PF00096.26	5.1e-24	3	3
ENSGACP00000001509	zf-met	PF12874.7	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001510	-	747	-	ENSGACP00000001509	249 (aa)	-	G3N875

Gene Model

Click here to download ENSGACG00000001166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001166	-	99	38.938	ENSGACG00000004765	-	100	38.938
ENSGACG00000001166	-	100	39.184	ENSGACG00000004761	-	100	39.184
ENSGACG00000001166	-	99	31.677	ENSGACG00000006824	znf131	53	30.682
ENSGACG00000001166	-	100	36.496	ENSGACG00000010352	si:ch211-207i20.2	61	37.959
ENSGACG00000001166	-	99	34.444	ENSGACG00000012611	-	85	34.444
ENSGACG00000001166	-	100	34.118	ENSGACG00000018794	ovol1a	59	34.118
ENSGACG00000001166	-	98	34.507	ENSGACG00000015674	gfi1aa	58	33.696
ENSGACG00000001166	-	96	33.582	ENSGACG00000018415	-	99	33.582
ENSGACG00000001166	-	99	34.247	ENSGACG00000010384	-	99	34.247
ENSGACG00000001166	-	99	31.203	ENSGACG00000003258	znf319b	86	31.203
ENSGACG00000001166	-	100	35.870	ENSGACG00000001377	-	93	35.870
ENSGACG00000001166	-	100	32.787	ENSGACG00000001371	-	100	34.615
ENSGACG00000001166	-	99	30.000	ENSGACG00000014714	si:dkey-89b17.4	63	30.000
ENSGACG00000001166	-	100	36.000	ENSGACG00000004478	-	100	38.346
ENSGACG00000001166	-	99	36.957	ENSGACG00000019550	-	92	36.957
ENSGACG00000001166	-	99	33.582	ENSGACG00000010515	ZNF628	99	33.582
ENSGACG00000001166	-	100	36.694	ENSGACG00000013660	-	99	38.211
ENSGACG00000001166	-	99	38.636	ENSGACG00000014395	-	100	38.636
ENSGACG00000001166	-	100	31.250	ENSGACG00000009449	znf526	52	31.250
ENSGACG00000001166	-	99	31.984	ENSGACG00000018816	-	99	32.932
ENSGACG00000001166	-	100	35.600	ENSGACG00000004549	-	99	35.600
ENSGACG00000001166	-	100	32.714	ENSGACG00000001523	-	98	32.714
ENSGACG00000001166	-	100	33.136	ENSGACG00000014840	maza	85	33.333
ENSGACG00000001166	-	99	31.967	ENSGACG00000015729	-	99	31.967
ENSGACG00000001166	-	99	37.956	ENSGACG00000012415	GZF1	98	37.956
ENSGACG00000001166	-	98	36.275	ENSGACG00000005239	-	84	36.275
ENSGACG00000001166	-	100	34.538	ENSGACG00000010393	-	100	34.538
ENSGACG00000001166	-	99	40.909	ENSGACG00000012517	-	100	35.887
ENSGACG00000001166	-	100	33.607	ENSGACG00000019863	-	99	33.607
ENSGACG00000001166	-	100	35.252	ENSGACG00000010051	-	87	35.772
ENSGACG00000001166	-	99	33.846	ENSGACG00000008733	znf646	74	33.846
ENSGACG00000001166	-	100	31.556	ENSGACG00000016102	zbtb41	50	31.556
ENSGACG00000001166	-	100	37.805	ENSGACG00000005553	znf236	99	33.600
ENSGACG00000001166	-	100	40.698	ENSGACG00000006283	-	72	40.698
ENSGACG00000001166	-	99	40.000	ENSGACG00000005742	-	58	37.805
ENSGACG00000001166	-	100	33.469	ENSGACG00000011187	zbtb48	54	33.469
ENSGACG00000001166	-	98	31.818	ENSGACG00000018088	si:dkey-7i4.5	99	31.818
ENSGACG00000001166	-	100	37.247	ENSGACG00000013652	-	99	36.032
ENSGACG00000001166	-	100	33.557	ENSGACG00000013659	-	93	33.557
ENSGACG00000001166	-	99	37.008	ENSGACG00000016248	-	99	37.008
ENSGACG00000001166	-	99	37.209	ENSGACG00000011808	e4f1	54	35.897
ENSGACG00000001166	-	100	41.250	ENSGACG00000001358	-	99	41.250
ENSGACG00000001166	-	99	31.496	ENSGACG00000003372	zbtb47b	53	31.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001166	-	100	32.308	FBgn0029928	CG3032	65	34.091	Drosophila_melanogaster
ENSGACG00000001166	-	100	52.962	ENSHCOG00000008686	-	89	50.800	Hippocampus_comes