EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000001176 (Gene tree)
Gene ID
-
Gene Symbol
si:ch1073-335m2.2
Alias
-
Full Name
si:ch1073-335m2.2
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
16472 bases
Position
chrscaffold_27:3253870-3270341
Accession
ZDB-GENE-081104-82
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000001524RRM_5PF13893.62.8e-0812
ENSGACP00000001524RRM_5PF13893.62.8e-0822
ENSGACP00000001524RRM_1PF00076.225.9e-4213
ENSGACP00000001524RRM_1PF00076.225.9e-4223
ENSGACP00000001524RRM_1PF00076.225.9e-4233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000001525-9810-ENSGACP000000015243269 (aa)-G3N890
ENSGACT00000001527-878-ENSGACP00000001526236 (aa)-G3N892
Gene Model
Click here to download ENSGACG00000001176's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001176's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000001176si:ch1073-335m2.29680.233ENSGACG00000005341-10041.713
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000001176si:ch1073-335m2.27880.588ENSG00000065526SPEN8585.657Homo_sapiens
ENSGACG00000001176si:ch1073-335m2.210041.604ENSAPOG00000009853-9167.045Acanthochromis_polyacanthus
ENSGACG00000001176si:ch1073-335m2.210076.804ENSAPOG00000011411si:ch1073-335m2.210077.063Acanthochromis_polyacanthus
ENSGACG00000001176si:ch1073-335m2.210041.714ENSAOCG00000014505-10042.097Amphiprion_ocellaris
ENSGACG00000001176si:ch1073-335m2.28974.300ENSAOCG00000008077si:ch1073-335m2.29974.133Amphiprion_ocellaris
ENSGACG00000001176si:ch1073-335m2.210041.592ENSAPEG00000010288-10042.085Amphiprion_percula
ENSGACG00000001176si:ch1073-335m2.210075.776ENSAPEG00000013515si:ch1073-335m2.210075.955Amphiprion_percula
ENSGACG00000001176si:ch1073-335m2.27080.814ENSATEG00000005627-10041.951Anabas_testudineus
ENSGACG00000001176si:ch1073-335m2.210075.223ENSATEG00000007674si:ch1073-335m2.210075.223Anabas_testudineus
ENSGACG00000001176si:ch1073-335m2.29680.000ENSAPLG00000012618SPEN9580.000Anas_platyrhynchos
ENSGACG00000001176si:ch1073-335m2.27080.000ENSACAG00000013761SPEN6280.000Anolis_carolinensis
ENSGACG00000001176si:ch1073-335m2.28180.588ENSANAG00000034428SPEN7980.588Aotus_nancymaae
ENSGACG00000001176si:ch1073-335m2.210071.203ENSACLG00000021433si:ch1073-335m2.210071.590Astatotilapia_calliptera
ENSGACG00000001176si:ch1073-335m2.210042.112ENSACLG00000016922-10042.340Astatotilapia_calliptera
ENSGACG00000001176si:ch1073-335m2.29977.714ENSAMXG00000012485spen9452.882Astyanax_mexicanus
ENSGACG00000001176si:ch1073-335m2.28273.333ENSBTAG00000018729SPEN7773.333Bos_taurus
ENSGACG00000001176si:ch1073-335m2.28281.287ENSCJAG00000008527SPEN7981.287Callithrix_jacchus
ENSGACG00000001176si:ch1073-335m2.27160.690ENSCAFG00000016132-7461.084Canis_familiaris
ENSGACG00000001176si:ch1073-335m2.28181.765ENSCHIG00000025070SPEN7381.765Capra_hircus
ENSGACG00000001176si:ch1073-335m2.27381.176ENSTSYG00000036016SPEN7681.176Carlito_syrichta
ENSGACG00000001176si:ch1073-335m2.28681.437ENSCAPG00000013803SPEN8483.951Cavia_aperea
ENSGACG00000001176si:ch1073-335m2.28681.437ENSCPOG00000014036SPEN8583.951Cavia_porcellus
ENSGACG00000001176si:ch1073-335m2.27281.176ENSCCAG00000020258SPEN7881.176Cebus_capucinus
ENSGACG00000001176si:ch1073-335m2.27881.176ENSCATG00000015079SPEN7481.176Cercocebus_atys
ENSGACG00000001176si:ch1073-335m2.25080.838ENSCLAG00000002018SPEN5083.333Chinchilla_lanigera
ENSGACG00000001176si:ch1073-335m2.28181.176ENSCSAG00000000841SPEN7481.176Chlorocebus_sabaeus
ENSGACG00000001176si:ch1073-335m2.29080.000ENSCPBG00000010477SPEN8980.000Chrysemys_picta_bellii
ENSGACG00000001176si:ch1073-335m2.28181.176ENSCANG00000034547SPEN7881.176Colobus_angolensis_palliatus
ENSGACG00000001176si:ch1073-335m2.27281.065ENSCGRG00000010581Spen8081.065Cricetulus_griseus_crigri
ENSGACG00000001176si:ch1073-335m2.27375.543ENSCSEG00000003915-9775.543Cynoglossus_semilaevis
ENSGACG00000001176si:ch1073-335m2.210066.527ENSCVAG00000009075si:ch1073-335m2.210066.567Cyprinodon_variegatus
ENSGACG00000001176si:ch1073-335m2.29779.651ENSCVAG00000016346-10041.403Cyprinodon_variegatus
ENSGACG00000001176si:ch1073-335m2.29545.216ENSDARG00000074245spen10081.481Danio_rerio
ENSGACG00000001176si:ch1073-335m2.210053.351ENSDARG00000074332si:ch1073-335m2.210053.190Danio_rerio
ENSGACG00000001176si:ch1073-335m2.28081.176ENSDNOG00000041948SPEN7581.176Dasypus_novemcinctus
ENSGACG00000001176si:ch1073-335m2.26381.176ENSDORG00000023909Spen6281.176Dipodomys_ordii
ENSGACG00000001176si:ch1073-335m2.27981.765ENSEASG00005015911SPEN7681.765Equus_asinus_asinus
ENSGACG00000001176si:ch1073-335m2.27981.765ENSECAG00000008833SPEN7681.765Equus_caballus
ENSGACG00000001176si:ch1073-335m2.25683.721ENSEEUG00000010255SPEN5883.721Erinaceus_europaeus
ENSGACG00000001176si:ch1073-335m2.210062.046ENSELUG00000007726si:ch1073-335m2.210062.252Esox_lucius
ENSGACG00000001176si:ch1073-335m2.25880.588ENSFALG00000003551SPEN6680.588Ficedula_albicollis
ENSGACG00000001176si:ch1073-335m2.28083.951ENSFDAG00000010212SPEN7283.951Fukomys_damarensis
ENSGACG00000001176si:ch1073-335m2.210066.158ENSFHEG00000004544si:ch1073-335m2.210066.348Fundulus_heteroclitus
ENSGACG00000001176si:ch1073-335m2.27550.720ENSGMOG00000008397-9079.191Gadus_morhua
ENSGACG00000001176si:ch1073-335m2.210066.626ENSGMOG00000008156si:ch1073-335m2.210066.384Gadus_morhua
ENSGACG00000001176si:ch1073-335m2.27179.412ENSGALG00000036932SPEN9679.412Gallus_gallus
ENSGACG00000001176si:ch1073-335m2.29779.651ENSGAFG00000015819-9170.270Gambusia_affinis
ENSGACG00000001176si:ch1073-335m2.210067.055ENSGAFG00000021570si:ch1073-335m2.210066.995Gambusia_affinis
ENSGACG00000001176si:ch1073-335m2.29180.000ENSGAGG00000020785SPEN8980.000Gopherus_agassizii
ENSGACG00000001176si:ch1073-335m2.27966.667ENSGGOG00000012041SPEN7666.667Gorilla_gorilla
ENSGACG00000001176si:ch1073-335m2.210071.322ENSHBUG00000023253si:ch1073-335m2.210071.739Haplochromis_burtoni
ENSGACG00000001176si:ch1073-335m2.210041.939ENSHBUG00000020626-10042.165Haplochromis_burtoni
ENSGACG00000001176si:ch1073-335m2.26384.568ENSHGLG00000019259SPEN6084.568Heterocephalus_glaber_female
ENSGACG00000001176si:ch1073-335m2.26082.530ENSHGLG00100019294SPEN6584.568Heterocephalus_glaber_male
ENSGACG00000001176si:ch1073-335m2.29767.212ENSHCOG00000006004si:ch1073-335m2.29967.016Hippocampus_comes
ENSGACG00000001176si:ch1073-335m2.29672.727ENSIPUG00000018212si:ch1073-335m2.29954.369Ictalurus_punctatus
ENSGACG00000001176si:ch1073-335m2.210041.457ENSIPUG00000021668spen10041.509Ictalurus_punctatus
ENSGACG00000001176si:ch1073-335m2.28181.176ENSSTOG00000021428SPEN6481.176Ictidomys_tridecemlineatus
ENSGACG00000001176si:ch1073-335m2.28179.412ENSJJAG00000010882Spen9279.412Jaculus_jaculus
ENSGACG00000001176si:ch1073-335m2.27080.233ENSKMAG00000003882-9780.233Kryptolebias_marmoratus
ENSGACG00000001176si:ch1073-335m2.210070.071ENSKMAG00000021725si:ch1073-335m2.210069.863Kryptolebias_marmoratus
ENSGACG00000001176si:ch1073-335m2.210075.791ENSLBEG00000020855si:ch1073-335m2.210075.696Labrus_bergylta
ENSGACG00000001176si:ch1073-335m2.28077.907ENSLBEG00000019129-5577.907Labrus_bergylta
ENSGACG00000001176si:ch1073-335m2.29680.588ENSLACG00000003258SPEN9580.588Latimeria_chalumnae
ENSGACG00000001176si:ch1073-335m2.29778.035ENSLOCG00000007896si:ch1073-335m2.28878.035Lepisosteus_oculatus
ENSGACG00000001176si:ch1073-335m2.28581.437ENSLAFG00000004524SPEN8083.951Loxodonta_africana
ENSGACG00000001176si:ch1073-335m2.28181.176ENSMFAG00000041974SPEN7981.176Macaca_fascicularis
ENSGACG00000001176si:ch1073-335m2.27881.176ENSMMUG00000008026SPEN7481.176Macaca_mulatta
ENSGACG00000001176si:ch1073-335m2.27881.176ENSMNEG00000042402SPEN7481.176Macaca_nemestrina
ENSGACG00000001176si:ch1073-335m2.27881.176ENSMLEG00000039293SPEN7481.176Mandrillus_leucophaeus
ENSGACG00000001176si:ch1073-335m2.210075.141ENSMAMG00000023870si:ch1073-335m2.210075.082Mastacembelus_armatus
ENSGACG00000001176si:ch1073-335m2.210071.182ENSMZEG00005011762si:ch1073-335m2.210071.599Maylandia_zebra
ENSGACG00000001176si:ch1073-335m2.29040.559ENSMZEG00005021491-9940.561Maylandia_zebra
ENSGACG00000001176si:ch1073-335m2.28681.176ENSMICG00000030994SPEN8081.176Microcebus_murinus
ENSGACG00000001176si:ch1073-335m2.27381.176ENSMOCG00000016083Spen8081.176Microtus_ochrogaster
ENSGACG00000001176si:ch1073-335m2.210075.186ENSMMOG00000021742si:ch1073-335m2.210074.620Mola_mola
ENSGACG00000001176si:ch1073-335m2.29679.070ENSMALG00000008625-10042.238Monopterus_albus
ENSGACG00000001176si:ch1073-335m2.27381.176MGP_CAROLIEiJ_G0026745Spen7781.176Mus_caroli
ENSGACG00000001176si:ch1073-335m2.28181.176ENSMUSG00000040761Spen8081.176Mus_musculus
ENSGACG00000001176si:ch1073-335m2.26481.176MGP_PahariEiJ_G0029076Spen8081.176Mus_pahari
ENSGACG00000001176si:ch1073-335m2.27381.176MGP_SPRETEiJ_G0027724Spen8081.176Mus_spretus
ENSGACG00000001176si:ch1073-335m2.27781.176ENSMPUG00000016317SPEN7281.176Mustela_putorius_furo
ENSGACG00000001176si:ch1073-335m2.28083.333ENSMLUG00000010144SPEN9969.888Myotis_lucifugus
ENSGACG00000001176si:ch1073-335m2.29380.588ENSNGAG00000000641Spen9180.588Nannospalax_galili
ENSGACG00000001176si:ch1073-335m2.28538.003ENSNBRG00000022090-10038.036Neolamprologus_brichardi
ENSGACG00000001176si:ch1073-335m2.210070.420ENSNBRG00000005733si:ch1073-335m2.210070.569Neolamprologus_brichardi
ENSGACG00000001176si:ch1073-335m2.27780.588ENSNLEG00000007652SPEN7480.588Nomascus_leucogenys
ENSGACG00000001176si:ch1073-335m2.27377.895ENSMEUG00000002422SPEN7377.895Notamacropus_eugenii
ENSGACG00000001176si:ch1073-335m2.25681.176ENSOPRG00000015800SPEN7181.176Ochotona_princeps
ENSGACG00000001176si:ch1073-335m2.26680.838ENSODEG00000016644SPEN6383.333Octodon_degus
ENSGACG00000001176si:ch1073-335m2.29779.651ENSONIG00000006573-9973.599Oreochromis_niloticus
ENSGACG00000001176si:ch1073-335m2.26380.588ENSOCUG00000010840SPEN7780.588Oryctolagus_cuniculus
ENSGACG00000001176si:ch1073-335m2.210067.665ENSORLG00000018414si:ch1073-335m2.210067.294Oryzias_latipes
ENSGACG00000001176si:ch1073-335m2.210067.373ENSORLG00020009351si:ch1073-335m2.210067.394Oryzias_latipes_hni
ENSGACG00000001176si:ch1073-335m2.29696.894ENSORLG00015005537si:ch1073-335m2.29996.894Oryzias_latipes_hsok
ENSGACG00000001176si:ch1073-335m2.29788.398ENSOMEG00000004509si:ch1073-335m2.210088.398Oryzias_melastigma
ENSGACG00000001176si:ch1073-335m2.210040.198ENSOMEG00000007639-9349.785Oryzias_melastigma
ENSGACG00000001176si:ch1073-335m2.27881.176ENSOGAG00000025110SPEN7281.176Otolemur_garnettii
ENSGACG00000001176si:ch1073-335m2.28181.765ENSOARG00000008477SPEN7281.765Ovis_aries
ENSGACG00000001176si:ch1073-335m2.27866.667ENSPPAG00000035690SPEN7666.667Pan_paniscus
ENSGACG00000001176si:ch1073-335m2.27966.667ENSPTRG00000000210SPEN7666.667Pan_troglodytes
ENSGACG00000001176si:ch1073-335m2.27881.176ENSPANG00000006293SPEN7481.176Papio_anubis
ENSGACG00000001176si:ch1073-335m2.29792.857ENSPKIG00000010492si:ch1073-335m2.210092.857Paramormyrops_kingsleyae
ENSGACG00000001176si:ch1073-335m2.210046.148ENSPKIG00000002617SPEN9169.697Paramormyrops_kingsleyae
ENSGACG00000001176si:ch1073-335m2.27080.000ENSPSIG00000008026SPEN6980.000Pelodiscus_sinensis
ENSGACG00000001176si:ch1073-335m2.28181.176ENSPEMG00000022997Spen7781.176Peromyscus_maniculatus_bairdii
ENSGACG00000001176si:ch1073-335m2.210066.895ENSPFOG00000017986si:ch1073-335m2.210067.402Poecilia_formosa
ENSGACG00000001176si:ch1073-335m2.210067.274ENSPLAG00000016625si:ch1073-335m2.210067.582Poecilia_latipinna
ENSGACG00000001176si:ch1073-335m2.210041.264ENSPMEG00000006764-9169.498Poecilia_mexicana
ENSGACG00000001176si:ch1073-335m2.210067.164ENSPMEG00000002674si:ch1073-335m2.210067.670Poecilia_mexicana
ENSGACG00000001176si:ch1073-335m2.210067.154ENSPREG00000005357si:ch1073-335m2.210067.680Poecilia_reticulata
ENSGACG00000001176si:ch1073-335m2.210040.945ENSPREG00000010399-9169.884Poecilia_reticulata
ENSGACG00000001176si:ch1073-335m2.27880.588ENSPPYG00000001834SPEN7480.588Pongo_abelii
ENSGACG00000001176si:ch1073-335m2.27279.412ENSPCAG00000009543SPEN5179.412Procavia_capensis
ENSGACG00000001176si:ch1073-335m2.28583.648ENSPCOG00000021735SPEN8083.648Propithecus_coquereli
ENSGACG00000001176si:ch1073-335m2.26079.412ENSPVAG00000013794SPEN5671.282Pteropus_vampyrus
ENSGACG00000001176si:ch1073-335m2.210071.173ENSPNYG00000009042si:ch1073-335m2.210071.560Pundamilia_nyererei
ENSGACG00000001176si:ch1073-335m2.210041.905ENSPNYG00000012379-10042.131Pundamilia_nyererei
ENSGACG00000001176si:ch1073-335m2.210056.323ENSPNAG00000011452si:ch1073-335m2.210055.858Pygocentrus_nattereri
ENSGACG00000001176si:ch1073-335m2.29978.613ENSPNAG00000020795spen8867.925Pygocentrus_nattereri
ENSGACG00000001176si:ch1073-335m2.26681.176ENSRNOG00000033556Spen8069.524Rattus_norvegicus
ENSGACG00000001176si:ch1073-335m2.27781.176ENSRBIG00000039654SPEN7581.176Rhinopithecus_bieti
ENSGACG00000001176si:ch1073-335m2.27781.176ENSRROG00000035686SPEN7481.176Rhinopithecus_roxellana
ENSGACG00000001176si:ch1073-335m2.28181.176ENSSBOG00000028770SPEN8366.667Saimiri_boliviensis_boliviensis
ENSGACG00000001176si:ch1073-335m2.27077.059ENSSHAG00000004960SPEN9969.963Sarcophilus_harrisii
ENSGACG00000001176si:ch1073-335m2.210045.653ENSSFOG00015010267si:ch1073-335m2.210045.670Scleropages_formosus
ENSGACG00000001176si:ch1073-335m2.28662.037ENSSFOG00015007131si:ch1073-335m2.29453.173Scleropages_formosus
ENSGACG00000001176si:ch1073-335m2.26980.233ENSSMAG00000008996-6280.233Scophthalmus_maximus
ENSGACG00000001176si:ch1073-335m2.210075.565ENSSMAG00000000125si:ch1073-335m2.210076.040Scophthalmus_maximus
ENSGACG00000001176si:ch1073-335m2.210079.268ENSSDUG00000008416si:ch1073-335m2.210079.120Seriola_dumerili
ENSGACG00000001176si:ch1073-335m2.27180.233ENSSDUG00000003476-9167.424Seriola_dumerili
ENSGACG00000001176si:ch1073-335m2.210077.171ENSSLDG00000023347si:ch1073-335m2.210076.990Seriola_lalandi_dorsalis
ENSGACG00000001176si:ch1073-335m2.27180.233ENSSLDG00000012950-9167.424Seriola_lalandi_dorsalis
ENSGACG00000001176si:ch1073-335m2.25886.111ENSSPUG00000001866-6680.000Sphenodon_punctatus
ENSGACG00000001176si:ch1073-335m2.29779.651ENSSPAG00000006014-9779.651Stegastes_partitus
ENSGACG00000001176si:ch1073-335m2.210077.374ENSSPAG00000012454si:ch1073-335m2.210077.583Stegastes_partitus
ENSGACG00000001176si:ch1073-335m2.27360.887ENSSSCG00000034484SPEN7961.281Sus_scrofa
ENSGACG00000001176si:ch1073-335m2.29679.651ENSTRUG00000024350-9779.651Takifugu_rubripes
ENSGACG00000001176si:ch1073-335m2.28867.746ENSTRUG00000021008si:ch1073-335m2.210067.645Takifugu_rubripes
ENSGACG00000001176si:ch1073-335m2.210070.323ENSTNIG00000014666si:ch1073-335m2.210070.173Tetraodon_nigroviridis
ENSGACG00000001176si:ch1073-335m2.27080.233ENSTNIG00000010907-9580.233Tetraodon_nigroviridis
ENSGACG00000001176si:ch1073-335m2.26981.176ENSTTRG00000015704SPEN6481.176Tursiops_truncatus
ENSGACG00000001176si:ch1073-335m2.28281.765ENSUAMG00000009600SPEN7570.476Ursus_americanus
ENSGACG00000001176si:ch1073-335m2.27981.765ENSUMAG00000021641SPEN7470.476Ursus_maritimus
ENSGACG00000001176si:ch1073-335m2.27981.176ENSVVUG00000028951SPEN7481.176Vulpes_vulpes
ENSGACG00000001176si:ch1073-335m2.27077.907ENSXETG00000023114SPEN9677.907Xenopus_tropicalis
ENSGACG00000001176si:ch1073-335m2.210065.106ENSXCOG00000004516si:ch1073-335m2.210065.095Xiphophorus_couchianus
ENSGACG00000001176si:ch1073-335m2.29779.070ENSXMAG00000021384-9169.349Xiphophorus_maculatus
ENSGACG00000001176si:ch1073-335m2.210067.754ENSXMAG00000029887si:ch1073-335m2.210067.794Xiphophorus_maculatus

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