EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001189 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3900 bases
Position: chrscaffold_129:225241-229140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001543	IF4E	PF01652.18	3.6e-56	1	1
ENSGACP00000001545	IF4E	PF01652.18	3.8e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001546	-	917	-	ENSGACP00000001545	226 (aa)	-	G3N8B1
ENSGACT00000001544	-	952	-	ENSGACP00000001543	225 (aa)	-	G3N8A9

Gene Model

Click here to download ENSGACG00000001189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001189	-	98	72.851	ENSGACG00000015090	eif4e2rs1	79	82.703
ENSGACG00000001189	-	60	32.609	ENSGACG00000011825	-	63	32.609
ENSGACG00000001189	-	73	31.977	ENSGACG00000003392	eif4e3	78	31.977
ENSGACG00000001189	-	79	32.787	ENSGACG00000005536	eif4eb	82	32.787
ENSGACG00000001189	-	89	30.047	ENSGACG00000016472	eif4ea	96	30.047
ENSGACG00000001189	-	75	36.416	ENSGACG00000007799	eif4e1c	88	34.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001189	-	79	95.506	ENSACIG00000009299	-	86	93.443	Amphilophus_citrinellus
ENSGACG00000001189	-	100	91.556	ENSAOCG00000018430	-	100	91.556	Amphiprion_ocellaris
ENSGACG00000001189	-	88	89.447	ENSAPEG00000021073	-	99	89.447	Amphiprion_percula
ENSGACG00000001189	-	100	89.333	ENSACLG00000013705	-	93	93.750	Astatotilapia_calliptera
ENSGACG00000001189	-	100	80.176	ENSAMXG00000019996	eif4e2rs1	87	89.474	Astyanax_mexicanus
ENSGACG00000001189	-	100	82.456	ENSDARG00000015835	eif4e2rs1	89	85.149	Danio_rerio
ENSGACG00000001189	-	100	80.617	ENSELUG00000017148	IF4E2	86	89.529	Esox_lucius
ENSGACG00000001189	-	85	86.911	ENSGMOG00000001743	-	96	86.911	Gadus_morhua
ENSGACG00000001189	-	50	83.186	ENSHBUG00000021575	-	60	90.909	Haplochromis_burtoni
ENSGACG00000001189	-	99	82.143	ENSHCOG00000013138	-	99	81.696	Hippocampus_comes
ENSGACG00000001189	-	85	88.482	ENSIPUG00000003906	eif4e2rs1	58	88.482	Ictalurus_punctatus
ENSGACG00000001189	-	84	95.213	ENSLBEG00000027305	-	74	95.213	Labrus_bergylta
ENSGACG00000001189	-	100	89.333	ENSMZEG00005009638	-	93	93.750	Maylandia_zebra
ENSGACG00000001189	-	96	84.793	ENSMMOG00000018476	-	76	90.306	Mola_mola
ENSGACG00000001189	-	100	88.000	ENSONIG00000017920	-	93	92.308	Oreochromis_niloticus
ENSGACG00000001189	-	90	84.729	ENSPKIG00000016393	eif4e2rs1	84	85.567	Paramormyrops_kingsleyae
ENSGACG00000001189	-	100	80.000	ENSPKIG00000004502	eif4e2rs1	83	90.625	Paramormyrops_kingsleyae
ENSGACG00000001189	-	99	89.189	ENSPNYG00000019593	-	89	93.750	Pundamilia_nyererei
ENSGACG00000001189	-	92	80.769	ENSPNAG00000005735	eif4e2rs1	81	90.000	Pygocentrus_nattereri
ENSGACG00000001189	-	86	89.637	ENSSFOG00015021065	eif4e2rs1	81	90.104	Scleropages_formosus
ENSGACG00000001189	-	100	94.667	ENSSMAG00000003537	-	100	94.667	Scophthalmus_maximus
ENSGACG00000001189	-	100	92.889	ENSSDUG00000007905	eif4e2rs1	100	92.889	Seriola_dumerili
ENSGACG00000001189	-	97	93.119	ENSSLDG00000020102	-	92	93.750	Seriola_lalandi_dorsalis
ENSGACG00000001189	-	51	80.000	ENSSPAG00000007757	-	75	80.000	Stegastes_partitus
ENSGACG00000001189	-	100	91.556	ENSTRUG00000006874	eif4e2rs1	100	91.556	Takifugu_rubripes
ENSGACG00000001189	-	99	85.586	ENSTNIG00000002861	-	94	87.981	Tetraodon_nigroviridis
ENSGACG00000001189	-	97	89.908	ENSTNIG00000003820	eif4e2rs1	95	91.346	Tetraodon_nigroviridis
ENSGACG00000001189	-	92	77.778	ENSXETG00000014992	eif4e2	90	84.211	Xenopus_tropicalis