EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001319 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1936 bases
Position: chrscaffold_252:3831-5766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001715	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001716	-	1191	-	ENSGACP00000001715	270 (aa)	-	G3N8S8

Gene Model

Click here to download ENSGACG00000001319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001319	-	100	94.074	ENSGACG00000012548	-	92	94.074
ENSGACG00000001319	-	99	98.876	ENSGACG00000012556	-	86	98.876
ENSGACG00000001319	-	99	36.194	ENSGACG00000007958	si:ch211-197g15.10	62	35.926
ENSGACG00000001319	-	98	36.842	ENSGACG00000009755	zgc:153654	58	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001319	-	97	59.542	ENSACIG00000015684	-	93	59.542	Amphilophus_citrinellus
ENSGACG00000001319	-	99	54.275	ENSACIG00000004444	-	97	54.275	Amphilophus_citrinellus
ENSGACG00000001319	-	98	59.091	ENSACIG00000015616	-	98	56.250	Amphilophus_citrinellus
ENSGACG00000001319	-	99	53.558	ENSACIG00000004501	-	93	53.558	Amphilophus_citrinellus
ENSGACG00000001319	-	97	62.835	ENSACIG00000000741	-	93	62.835	Amphilophus_citrinellus
ENSGACG00000001319	-	96	60.232	ENSACIG00000004426	-	89	60.232	Amphilophus_citrinellus
ENSGACG00000001319	-	97	56.870	ENSACIG00000004521	-	92	56.870	Amphilophus_citrinellus
ENSGACG00000001319	-	97	55.303	ENSACIG00000004408	-	91	55.303	Amphilophus_citrinellus
ENSGACG00000001319	-	97	41.353	ENSACIG00000015237	-	90	43.265	Amphilophus_citrinellus
ENSGACG00000001319	-	100	56.044	ENSAOCG00000002056	-	90	56.044	Amphiprion_ocellaris
ENSGACG00000001319	-	99	55.762	ENSAPEG00000021053	-	95	55.762	Amphiprion_percula
ENSGACG00000001319	-	99	49.259	ENSATEG00000002718	-	84	49.259	Anabas_testudineus
ENSGACG00000001319	-	99	54.887	ENSATEG00000002869	-	94	54.887	Anabas_testudineus
ENSGACG00000001319	-	96	50.193	ENSACLG00000002020	-	95	50.193	Astatotilapia_calliptera
ENSGACG00000001319	-	99	46.296	ENSACLG00000010292	-	95	46.296	Astatotilapia_calliptera
ENSGACG00000001319	-	98	52.075	ENSACLG00000027615	-	99	52.075	Astatotilapia_calliptera
ENSGACG00000001319	-	91	46.122	ENSACLG00000016390	-	94	46.122	Astatotilapia_calliptera
ENSGACG00000001319	-	96	58.140	ENSACLG00000016487	-	86	58.140	Astatotilapia_calliptera
ENSGACG00000001319	-	94	46.899	ENSACLG00000018321	-	90	46.899	Astatotilapia_calliptera
ENSGACG00000001319	-	93	36.508	ENSAMXG00000037563	-	89	36.508	Astyanax_mexicanus
ENSGACG00000001319	-	97	49.425	ENSCSEG00000018832	-	97	49.425	Cynoglossus_semilaevis
ENSGACG00000001319	-	93	45.136	ENSCVAG00000007214	-	98	45.136	Cyprinodon_variegatus
ENSGACG00000001319	-	99	44.444	ENSCVAG00000016719	-	93	44.444	Cyprinodon_variegatus
ENSGACG00000001319	-	64	44.068	ENSCVAG00000014640	-	81	44.068	Cyprinodon_variegatus
ENSGACG00000001319	-	95	50.195	ENSCVAG00000023166	-	97	50.195	Cyprinodon_variegatus
ENSGACG00000001319	-	99	40.892	ENSDARG00000093857	si:dkey-79f11.10	83	40.892	Danio_rerio
ENSGACG00000001319	-	97	38.403	ENSDARG00000010729	CABZ01073795.1	91	38.403	Danio_rerio
ENSGACG00000001319	-	62	35.714	ENSDARG00000092361	si:dkey-79f11.7	71	35.714	Danio_rerio
ENSGACG00000001319	-	77	45.933	ENSDARG00000015678	si:dkeyp-75b4.9	99	45.933	Danio_rerio
ENSGACG00000001319	-	97	41.573	ENSDARG00000075791	si:dkey-79f11.5	84	41.573	Danio_rerio
ENSGACG00000001319	-	96	37.879	ENSDARG00000029720	si:dkeyp-9d4.2	88	38.636	Danio_rerio
ENSGACG00000001319	-	99	40.520	ENSDARG00000092634	CABZ01000634.1	91	40.520	Danio_rerio
ENSGACG00000001319	-	97	41.132	ENSDARG00000107486	CR855320.3	89	41.132	Danio_rerio
ENSGACG00000001319	-	92	38.281	ENSDARG00000095309	si:dkey-79f11.9	90	38.281	Danio_rerio
ENSGACG00000001319	-	97	41.132	ENSDARG00000095673	si:dkey-79f11.8	81	41.132	Danio_rerio
ENSGACG00000001319	-	99	47.985	ENSFHEG00000021105	-	89	47.985	Fundulus_heteroclitus
ENSGACG00000001319	-	94	45.276	ENSFHEG00000018078	-	92	45.276	Fundulus_heteroclitus
ENSGACG00000001319	-	79	49.321	ENSFHEG00000019992	-	73	49.321	Fundulus_heteroclitus
ENSGACG00000001319	-	100	47.232	ENSFHEG00000018069	-	92	47.232	Fundulus_heteroclitus
ENSGACG00000001319	-	99	45.149	ENSGAFG00000019423	-	59	45.149	Gambusia_affinis
ENSGACG00000001319	-	90	43.320	ENSGAFG00000019422	-	95	43.320	Gambusia_affinis
ENSGACG00000001319	-	92	54.032	ENSHBUG00000010945	-	92	54.032	Haplochromis_burtoni
ENSGACG00000001319	-	73	33.333	ENSIPUG00000006725	-	99	33.333	Ictalurus_punctatus
ENSGACG00000001319	-	97	42.205	ENSIPUG00000007632	-	75	42.205	Ictalurus_punctatus
ENSGACG00000001319	-	96	43.023	ENSIPUG00000005624	-	95	43.023	Ictalurus_punctatus
ENSGACG00000001319	-	97	43.774	ENSIPUG00000006852	-	83	43.774	Ictalurus_punctatus
ENSGACG00000001319	-	93	50.198	ENSKMAG00000000369	-	93	50.198	Kryptolebias_marmoratus
ENSGACG00000001319	-	94	50.588	ENSKMAG00000000325	-	91	50.588	Kryptolebias_marmoratus
ENSGACG00000001319	-	94	52.941	ENSKMAG00000006729	-	94	52.941	Kryptolebias_marmoratus
ENSGACG00000001319	-	99	45.756	ENSMAMG00000003546	-	89	45.756	Mastacembelus_armatus
ENSGACG00000001319	-	97	53.257	ENSMAMG00000003570	-	91	53.257	Mastacembelus_armatus
ENSGACG00000001319	-	98	56.061	ENSMZEG00005008301	-	99	56.061	Maylandia_zebra
ENSGACG00000001319	-	94	47.287	ENSMZEG00005015498	-	90	47.287	Maylandia_zebra
ENSGACG00000001319	-	97	56.654	ENSMZEG00005008329	-	99	56.654	Maylandia_zebra
ENSGACG00000001319	-	98	48.106	ENSNBRG00000020744	-	90	48.106	Neolamprologus_brichardi
ENSGACG00000001319	-	98	57.576	ENSNBRG00000006386	-	99	57.576	Neolamprologus_brichardi
ENSGACG00000001319	-	91	57.959	ENSNBRG00000020781	-	98	57.959	Neolamprologus_brichardi
ENSGACG00000001319	-	97	54.307	ENSNBRG00000020806	-	91	54.307	Neolamprologus_brichardi
ENSGACG00000001319	-	99	47.212	ENSNBRG00000023290	-	89	47.212	Neolamprologus_brichardi
ENSGACG00000001319	-	94	48.062	ENSNBRG00000024253	-	87	48.062	Neolamprologus_brichardi
ENSGACG00000001319	-	99	53.532	ENSNBRG00000006414	-	91	53.532	Neolamprologus_brichardi
ENSGACG00000001319	-	97	55.172	ENSNBRG00000022075	-	91	55.469	Neolamprologus_brichardi
ENSGACG00000001319	-	97	55.556	ENSONIG00000015247	-	92	55.556	Oreochromis_niloticus
ENSGACG00000001319	-	91	55.510	ENSONIG00000012317	-	98	55.510	Oreochromis_niloticus
ENSGACG00000001319	-	96	57.143	ENSONIG00000015167	-	100	57.143	Oreochromis_niloticus
ENSGACG00000001319	-	90	50.813	ENSONIG00000016843	-	99	50.813	Oreochromis_niloticus
ENSGACG00000001319	-	99	42.279	ENSONIG00000018790	-	92	42.279	Oreochromis_niloticus
ENSGACG00000001319	-	67	59.116	ENSONIG00000013227	-	100	59.116	Oreochromis_niloticus
ENSGACG00000001319	-	95	54.297	ENSONIG00000015371	-	99	54.297	Oreochromis_niloticus
ENSGACG00000001319	-	96	56.538	ENSONIG00000012319	-	100	56.538	Oreochromis_niloticus
ENSGACG00000001319	-	91	54.251	ENSONIG00000017465	-	99	54.251	Oreochromis_niloticus
ENSGACG00000001319	-	96	48.302	ENSPMGG00000002695	-	98	48.302	Periophthalmus_magnuspinnatus
ENSGACG00000001319	-	98	46.038	ENSPMGG00000022341	-	79	46.038	Periophthalmus_magnuspinnatus
ENSGACG00000001319	-	96	52.510	ENSPMGG00000012906	-	92	52.510	Periophthalmus_magnuspinnatus
ENSGACG00000001319	-	98	44.737	ENSPMGG00000004994	-	92	44.737	Periophthalmus_magnuspinnatus
ENSGACG00000001319	-	99	49.814	ENSPFOG00000003841	-	92	49.814	Poecilia_formosa
ENSGACG00000001319	-	99	50.186	ENSPFOG00000003807	-	94	50.186	Poecilia_formosa
ENSGACG00000001319	-	98	46.038	ENSPFOG00000015455	-	88	46.038	Poecilia_formosa
ENSGACG00000001319	-	98	46.992	ENSPFOG00000015382	-	93	46.992	Poecilia_formosa
ENSGACG00000001319	-	99	44.444	ENSPFOG00000015493	-	93	44.444	Poecilia_formosa
ENSGACG00000001319	-	96	48.837	ENSPLAG00000018274	-	91	48.837	Poecilia_latipinna
ENSGACG00000001319	-	96	45.946	ENSPMEG00000018626	-	91	45.946	Poecilia_mexicana
ENSGACG00000001319	-	97	47.170	ENSPMEG00000018635	-	92	47.170	Poecilia_mexicana
ENSGACG00000001319	-	99	48.131	ENSPREG00000005137	-	96	48.131	Poecilia_reticulata
ENSGACG00000001319	-	94	55.336	ENSPNYG00000005478	-	88	55.336	Pundamilia_nyererei
ENSGACG00000001319	-	94	47.287	ENSPNYG00000001584	-	90	47.287	Pundamilia_nyererei
ENSGACG00000001319	-	99	54.682	ENSPNYG00000024019	-	89	54.682	Pundamilia_nyererei
ENSGACG00000001319	-	99	36.170	ENSPNAG00000006327	-	68	36.170	Pygocentrus_nattereri
ENSGACG00000001319	-	99	44.195	ENSPNAG00000009266	-	97	44.195	Pygocentrus_nattereri
ENSGACG00000001319	-	98	51.880	ENSSDUG00000002359	-	98	51.880	Seriola_dumerili
ENSGACG00000001319	-	99	52.060	ENSSDUG00000002417	-	98	52.060	Seriola_dumerili
ENSGACG00000001319	-	99	52.612	ENSSLDG00000008952	-	94	52.612	Seriola_lalandi_dorsalis
ENSGACG00000001319	-	99	52.809	ENSSLDG00000016397	-	99	52.809	Seriola_lalandi_dorsalis
ENSGACG00000001319	-	96	58.238	ENSSPAG00000012915	-	98	58.238	Stegastes_partitus
ENSGACG00000001319	-	99	59.551	ENSSPAG00000012856	-	94	59.551	Stegastes_partitus
ENSGACG00000001319	-	83	44.737	ENSXCOG00000019639	-	86	44.737	Xiphophorus_couchianus
ENSGACG00000001319	-	62	50.289	ENSXCOG00000003913	-	87	50.289	Xiphophorus_couchianus
ENSGACG00000001319	-	72	52.020	ENSXCOG00000008517	-	61	52.020	Xiphophorus_couchianus
ENSGACG00000001319	-	96	44.615	ENSXMAG00000009971	-	68	44.615	Xiphophorus_maculatus
ENSGACG00000001319	-	97	46.241	ENSXMAG00000009973	-	91	46.512	Xiphophorus_maculatus
ENSGACG00000001319	-	98	50.000	ENSXMAG00000029117	-	95	50.000	Xiphophorus_maculatus