EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001339 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2431 bases
Position: chrscaffold_115:68236-70666
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001735	RNase_Zc3h12a	PF11977.8	5.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001736	-	1704	-	ENSGACP00000001735	567 (aa)	-	G3N8U8

Gene Model

Click here to download ENSGACG00000001339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001339	-	99	50.575	ENSGACG00000014201	-	99	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001339	-	99	62.248	ENSAPOG00000001632	-	76	82.239	Acanthochromis_polyacanthus
ENSGACG00000001339	-	99	51.364	ENSAOCG00000003866	-	73	49.242	Amphiprion_ocellaris
ENSGACG00000001339	-	99	50.162	ENSAPEG00000018582	-	99	50.980	Amphiprion_percula
ENSGACG00000001339	-	99	50.643	ENSAPEG00000005727	-	85	45.869	Amphiprion_percula
ENSGACG00000001339	-	100	65.087	ENSATEG00000002260	-	66	87.554	Anabas_testudineus
ENSGACG00000001339	-	99	45.545	ENSATEG00000004134	-	72	46.535	Anabas_testudineus
ENSGACG00000001339	-	99	57.808	ENSACLG00000018493	-	74	59.043	Astatotilapia_calliptera
ENSGACG00000001339	-	99	45.143	ENSACLG00000027924	-	72	46.341	Astatotilapia_calliptera
ENSGACG00000001339	-	100	56.031	ENSCSEG00000008542	-	72	56.049	Cynoglossus_semilaevis
ENSGACG00000001339	-	99	59.184	ENSCSEG00000010073	-	84	44.798	Cynoglossus_semilaevis
ENSGACG00000001339	-	99	45.923	ENSCVAG00000002328	-	73	45.546	Cyprinodon_variegatus
ENSGACG00000001339	-	99	53.092	ENSELUG00000005470	-	74	54.449	Esox_lucius
ENSGACG00000001339	-	99	47.678	ENSELUG00000009319	-	83	48.726	Esox_lucius
ENSGACG00000001339	-	99	50.413	ENSFHEG00000021225	-	72	50.658	Fundulus_heteroclitus
ENSGACG00000001339	-	99	62.976	ENSGMOG00000017975	-	99	63.304	Gadus_morhua
ENSGACG00000001339	-	99	44.907	ENSGAFG00000005290	-	74	45.977	Gambusia_affinis
ENSGACG00000001339	-	98	60.000	ENSHBUG00000006831	-	72	46.341	Haplochromis_burtoni
ENSGACG00000001339	-	75	65.373	ENSHCOG00000008878	-	53	63.739	Hippocampus_comes
ENSGACG00000001339	-	99	45.652	ENSKMAG00000011694	-	73	46.043	Kryptolebias_marmoratus
ENSGACG00000001339	-	99	46.356	ENSLBEG00000003547	-	71	46.861	Labrus_bergylta
ENSGACG00000001339	-	99	46.356	ENSLBEG00000012554	-	86	46.939	Labrus_bergylta
ENSGACG00000001339	-	99	63.746	ENSLBEG00000012710	-	72	64.199	Labrus_bergylta
ENSGACG00000001339	-	99	49.114	ENSMAMG00000021794	-	73	49.515	Mastacembelus_armatus
ENSGACG00000001339	-	99	62.443	ENSMAMG00000020372	-	72	63.047	Mastacembelus_armatus
ENSGACG00000001339	-	99	45.143	ENSMZEG00005007718	-	72	46.341	Maylandia_zebra
ENSGACG00000001339	-	99	57.508	ENSMZEG00005019137	-	86	58.744	Maylandia_zebra
ENSGACG00000001339	-	99	65.669	ENSMMOG00000019526	-	70	65.987	Mola_mola
ENSGACG00000001339	-	99	49.134	ENSMMOG00000005728	-	72	50.000	Mola_mola
ENSGACG00000001339	-	68	63.788	ENSMALG00000010501	-	72	46.043	Monopterus_albus
ENSGACG00000001339	-	99	45.000	ENSNBRG00000006978	-	64	60.000	Neolamprologus_brichardi
ENSGACG00000001339	-	99	56.541	ENSNBRG00000012175	-	73	57.635	Neolamprologus_brichardi
ENSGACG00000001339	-	99	62.000	ENSONIG00000012268	-	85	50.886	Oreochromis_niloticus
ENSGACG00000001339	-	55	64.727	ENSOANG00000002060	ZC3H12A	62	64.364	Ornithorhynchus_anatinus
ENSGACG00000001339	-	99	44.239	ENSORLG00000029243	-	82	45.821	Oryzias_latipes
ENSGACG00000001339	-	99	44.097	ENSORLG00020017005	-	73	45.468	Oryzias_latipes_hni
ENSGACG00000001339	-	99	44.075	ENSORLG00015015211	-	73	45.827	Oryzias_latipes_hsok
ENSGACG00000001339	-	99	45.402	ENSOMEG00000006666	-	72	46.132	Oryzias_melastigma
ENSGACG00000001339	-	93	65.625	ENSPMGG00000020126	-	65	67.308	Periophthalmus_magnuspinnatus
ENSGACG00000001339	-	99	45.138	ENSPLAG00000009867	-	73	45.084	Poecilia_latipinna
ENSGACG00000001339	-	99	45.138	ENSPMEG00000006624	-	73	45.225	Poecilia_mexicana
ENSGACG00000001339	-	99	56.563	ENSPMEG00000011676	-	71	57.031	Poecilia_mexicana
ENSGACG00000001339	-	99	57.764	ENSPREG00000001607	-	72	58.230	Poecilia_reticulata
ENSGACG00000001339	-	99	45.428	ENSPREG00000010838	-	73	46.495	Poecilia_reticulata
ENSGACG00000001339	-	100	65.549	ENSSMAG00000007258	-	71	66.159	Scophthalmus_maximus
ENSGACG00000001339	-	99	61.224	ENSSDUG00000021864	-	65	61.224	Seriola_dumerili
ENSGACG00000001339	-	100	72.020	ENSSDUG00000013237	-	86	67.814	Seriola_dumerili
ENSGACG00000001339	-	100	66.916	ENSSLDG00000004886	-	72	67.665	Seriola_lalandi_dorsalis
ENSGACG00000001339	-	99	59.184	ENSSLDG00000012268	-	72	44.993	Seriola_lalandi_dorsalis
ENSGACG00000001339	-	100	63.595	ENSSPAG00000001850	-	72	63.897	Stegastes_partitus
ENSGACG00000001339	-	99	62.000	ENSSPAG00000009485	-	65	62.000	Stegastes_partitus
ENSGACG00000001339	-	68	63.462	ENSTRUG00000022519	-	72	44.872	Takifugu_rubripes
ENSGACG00000001339	-	98	50.497	ENSTNIG00000014519	-	95	51.747	Tetraodon_nigroviridis
ENSGACG00000001339	-	99	45.000	ENSXMAG00000027171	-	73	46.088	Xiphophorus_maculatus
ENSGACG00000001339	-	100	56.481	ENSXMAG00000014715	-	76	90.821	Xiphophorus_maculatus