EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3547 bases
Position: chrscaffold_115:129568-133114
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001739	TUDOR	PF00567.24	3.2e-44	1	2
ENSGACP00000001739	TUDOR	PF00567.24	3.2e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001740	-	1533	-	ENSGACP00000001739	511 (aa)	-	G3N8V2

Gene Model

Click here to download ENSGACG00000001340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001340	-	97	32.877	ENSGACG00000004820	tdrd6	65	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001340	-	100	36.398	ENSG00000132972	RNF17	76	35.101	Homo_sapiens
ENSGACG00000001340	-	100	35.385	ENSAMEG00000017340	RNF17	56	35.385	Ailuropoda_melanoleuca
ENSGACG00000001340	-	100	34.741	ENSAPLG00000003969	RNF17	63	34.741	Anas_platyrhynchos
ENSGACG00000001340	-	100	52.709	ENSAMXG00000011002	rnf17	65	52.709	Astyanax_mexicanus
ENSGACG00000001340	-	100	35.577	ENSCAFG00000007418	RNF17	60	35.577	Canis_familiaris
ENSGACG00000001340	-	75	37.383	ENSCAFG00020002919	-	83	37.383	Canis_lupus_dingo
ENSGACG00000001340	-	100	38.028	ENSCHIG00000026716	RNF17	62	35.171	Capra_hircus
ENSGACG00000001340	-	100	35.526	ENSTSYG00000000365	RNF17	69	37.383	Carlito_syrichta
ENSGACG00000001340	-	100	36.590	ENSCATG00000040352	RNF17	51	36.346	Cercocebus_atys
ENSGACG00000001340	-	100	36.620	ENSCPBG00000020920	RNF17	62	36.620	Chrysemys_picta_bellii
ENSGACG00000001340	-	100	36.450	ENSCANG00000032927	RNF17	51	36.207	Colobus_angolensis_palliatus
ENSGACG00000001340	-	100	37.645	ENSCGRG00001022658	Rnf17	50	37.645	Cricetulus_griseus_chok1gshd
ENSGACG00000001340	-	100	37.645	ENSCGRG00000009924	Rnf17	50	37.645	Cricetulus_griseus_crigri
ENSGACG00000001340	-	100	60.000	ENSCSEG00000008626	rnf17	72	57.885	Cynoglossus_semilaevis
ENSGACG00000001340	-	100	55.405	ENSCVAG00000017008	rnf17	50	55.405	Cyprinodon_variegatus
ENSGACG00000001340	-	98	45.850	ENSDARG00000056387	rnf17	55	45.850	Danio_rerio
ENSGACG00000001340	-	100	36.620	ENSDNOG00000006115	RNF17	51	36.620	Dasypus_novemcinctus
ENSGACG00000001340	-	75	36.449	ENSEASG00005001421	-	83	36.449	Equus_asinus_asinus
ENSGACG00000001340	-	100	35.962	ENSECAG00000017152	RNF17	54	35.962	Equus_caballus
ENSGACG00000001340	-	100	36.538	ENSFCAG00000004914	RNF17	80	37.383	Felis_catus
ENSGACG00000001340	-	100	35.067	ENSFALG00000008766	RNF17	51	35.067	Ficedula_albicollis
ENSGACG00000001340	-	100	48.047	ENSGMOG00000015560	-	100	48.047	Gadus_morhua
ENSGACG00000001340	-	100	57.757	ENSGAFG00000004463	rnf17	51	57.757	Gambusia_affinis
ENSGACG00000001340	-	100	37.023	ENSGAGG00000016999	RNF17	50	37.023	Gopherus_agassizii
ENSGACG00000001340	-	100	36.590	ENSGGOG00000014491	RNF17	79	39.252	Gorilla_gorilla
ENSGACG00000001340	-	100	49.126	ENSIPUG00000001087	rnf17	59	49.126	Ictalurus_punctatus
ENSGACG00000001340	-	65	38.532	ENSSTOG00000011255	-	59	38.532	Ictidomys_tridecemlineatus
ENSGACG00000001340	-	100	62.885	ENSKMAG00000013403	rnf17	54	62.885	Kryptolebias_marmoratus
ENSGACG00000001340	-	100	36.590	ENSMFAG00000032388	RNF17	51	36.590	Macaca_fascicularis
ENSGACG00000001340	-	100	36.590	ENSMMUG00000014610	RNF17	50	36.590	Macaca_mulatta
ENSGACG00000001340	-	100	36.590	ENSMNEG00000011234	RNF17	50	36.590	Macaca_nemestrina
ENSGACG00000001340	-	100	36.590	ENSMLEG00000030227	RNF17	51	36.590	Mandrillus_leucophaeus
ENSGACG00000001340	-	100	58.317	ENSMAMG00000020403	rnf17	56	58.317	Mastacembelus_armatus
ENSGACG00000001340	-	100	38.028	ENSMGAG00000015138	RNF17	79	38.028	Meleagris_gallopavo
ENSGACG00000001340	-	100	36.620	ENSMICG00000010364	RNF17	80	36.449	Microcebus_murinus
ENSGACG00000001340	-	76	36.620	ENSMOCG00000011818	-	73	36.620	Microtus_ochrogaster
ENSGACG00000001340	-	100	36.660	ENSMODG00000007827	RNF17	50	36.660	Monodelphis_domestica
ENSGACG00000001340	-	100	62.840	ENSMALG00000016943	rnf17	52	62.840	Monopterus_albus
ENSGACG00000001340	-	100	36.015	ENSMPUG00000013305	RNF17	56	36.015	Mustela_putorius_furo
ENSGACG00000001340	-	100	35.577	ENSMLUG00000003903	RNF17	56	35.577	Myotis_lucifugus
ENSGACG00000001340	-	100	36.620	ENSNGAG00000013553	Rnf17	50	36.620	Nannospalax_galili
ENSGACG00000001340	-	100	54.070	ENSNBRG00000012006	rnf17	60	54.070	Neolamprologus_brichardi
ENSGACG00000001340	-	100	36.590	ENSNLEG00000013780	RNF17	50	36.590	Nomascus_leucogenys
ENSGACG00000001340	-	100	62.042	ENSONIG00000015746	rnf17	63	60.496	Oreochromis_niloticus
ENSGACG00000001340	-	100	36.782	ENSOCUG00000007384	RNF17	50	36.782	Oryctolagus_cuniculus
ENSGACG00000001340	-	100	55.192	ENSORLG00000012818	rnf17	59	55.192	Oryzias_latipes
ENSGACG00000001340	-	100	55.385	ENSORLG00020009879	-	52	55.385	Oryzias_latipes_hni
ENSGACG00000001340	-	100	55.385	ENSORLG00015013027	-	52	55.385	Oryzias_latipes_hsok
ENSGACG00000001340	-	100	54.403	ENSOMEG00000009891	rnf17	59	54.403	Oryzias_melastigma
ENSGACG00000001340	-	100	36.398	ENSPPAG00000028779	RNF17	50	36.398	Pan_paniscus
ENSGACG00000001340	-	100	36.538	ENSPPRG00000009230	RNF17	80	37.383	Panthera_pardus
ENSGACG00000001340	-	100	36.538	ENSPTIG00000001738	RNF17	80	37.383	Panthera_tigris_altaica
ENSGACG00000001340	-	100	36.398	ENSPTRG00000005713	RNF17	50	36.398	Pan_troglodytes
ENSGACG00000001340	-	100	36.590	ENSPANG00000007640	RNF17	50	36.590	Papio_anubis
ENSGACG00000001340	-	100	47.249	ENSPKIG00000001648	rnf17	51	47.249	Paramormyrops_kingsleyae
ENSGACG00000001340	-	100	36.782	ENSPSIG00000011245	RNF17	80	36.782	Pelodiscus_sinensis
ENSGACG00000001340	-	100	37.859	ENSPEMG00000008693	Rnf17	50	37.859	Peromyscus_maniculatus_bairdii
ENSGACG00000001340	-	100	35.962	ENSPCIG00000009190	-	77	35.962	Phascolarctos_cinereus
ENSGACG00000001340	-	100	60.266	ENSPREG00000001414	rnf17	62	60.266	Poecilia_reticulata
ENSGACG00000001340	-	100	38.235	ENSPVAG00000013021	RNF17	53	38.235	Pteropus_vampyrus
ENSGACG00000001340	-	100	51.931	ENSPNAG00000027505	rnf17	55	51.931	Pygocentrus_nattereri
ENSGACG00000001340	-	100	36.641	ENSRBIG00000027010	RNF17	51	36.641	Rhinopithecus_bieti
ENSGACG00000001340	-	100	36.641	ENSRROG00000022801	RNF17	50	36.641	Rhinopithecus_roxellana
ENSGACG00000001340	-	100	36.468	ENSSHAG00000005609	RNF17	50	36.468	Sarcophilus_harrisii
ENSGACG00000001340	-	100	38.550	ENSSPUG00000008917	RNF17	70	38.550	Sphenodon_punctatus
ENSGACG00000001340	-	99	35.385	ENSSSCG00000009572	RNF17	56	35.385	Sus_scrofa
ENSGACG00000001340	-	100	34.579	ENSTGUG00000011267	-	79	34.579	Taeniopygia_guttata
ENSGACG00000001340	-	100	53.728	ENSTRUG00000015498	rnf17	60	53.728	Takifugu_rubripes
ENSGACG00000001340	-	100	53.965	ENSTNIG00000015681	rnf17	54	53.965	Tetraodon_nigroviridis
ENSGACG00000001340	-	75	36.449	ENSUMAG00000013953	-	83	36.449	Ursus_maritimus
ENSGACG00000001340	-	100	35.577	ENSVVUG00000006226	RNF17	58	35.577	Vulpes_vulpes