EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001352 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6600 bases
Position: chrscaffold_27:3874499-3881098
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001758	dsrm	PF00035.26	5.1e-44	1	3
ENSGACP00000001758	dsrm	PF00035.26	5.1e-44	2	3
ENSGACP00000001758	dsrm	PF00035.26	5.1e-44	3	3
ENSGACP00000001761	dsrm	PF00035.26	1.4e-40	1	3
ENSGACP00000001761	dsrm	PF00035.26	1.4e-40	2	3
ENSGACP00000001761	dsrm	PF00035.26	1.4e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001762	-	3033	-	ENSGACP00000001761	715 (aa)	-	G3N8X4
ENSGACT00000001759	-	2967	-	ENSGACP00000001758	687 (aa)	-	G3N8X1

Gene Model

Click here to download ENSGACG00000001352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001352	stau1	90	48.554	ENSGACG00000002757	stau2	99	48.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001352	stau1	96	71.322	ENSG00000124214	STAU1	99	73.904	Homo_sapiens
ENSGACG00000001352	stau1	100	92.341	ENSAPOG00000017260	stau1	100	92.341	Acanthochromis_polyacanthus
ENSGACG00000001352	stau1	99	67.714	ENSAMEG00000013681	STAU1	99	67.714	Ailuropoda_melanoleuca
ENSGACG00000001352	stau1	100	89.451	ENSACIG00000015918	stau1	100	90.462	Amphilophus_citrinellus
ENSGACG00000001352	stau1	100	93.353	ENSAOCG00000012224	stau1	100	93.353	Amphiprion_ocellaris
ENSGACG00000001352	stau1	100	93.208	ENSAPEG00000012308	stau1	100	93.208	Amphiprion_percula
ENSGACG00000001352	stau1	100	92.241	ENSATEG00000024600	stau1	100	92.241	Anabas_testudineus
ENSGACG00000001352	stau1	99	71.923	ENSAPLG00000010527	STAU1	99	71.923	Anas_platyrhynchos
ENSGACG00000001352	stau1	99	72.119	ENSACAG00000015909	STAU1	99	72.404	Anolis_carolinensis
ENSGACG00000001352	stau1	94	72.885	ENSANAG00000032714	STAU1	99	72.885	Aotus_nancymaae
ENSGACG00000001352	stau1	100	91.198	ENSACLG00000012270	stau1	100	91.198	Astatotilapia_calliptera
ENSGACG00000001352	stau1	96	78.571	ENSAMXG00000016812	stau1	98	78.947	Astyanax_mexicanus
ENSGACG00000001352	stau1	96	70.577	ENSBTAG00000000241	STAU1	99	72.115	Bos_taurus
ENSGACG00000001352	stau1	98	69.620	ENSCJAG00000016233	STAU1	99	72.692	Callithrix_jacchus
ENSGACG00000001352	stau1	96	70.577	ENSCAFG00000011347	STAU1	97	72.115	Canis_familiaris
ENSGACG00000001352	stau1	96	68.659	ENSCAFG00020017123	STAU1	99	72.313	Canis_lupus_dingo
ENSGACG00000001352	stau1	96	70.019	ENSCHIG00000001799	-	99	71.538	Capra_hircus
ENSGACG00000001352	stau1	96	70.943	ENSTSYG00000036179	-	99	71.731	Carlito_syrichta
ENSGACG00000001352	stau1	73	72.112	ENSCAPG00000017041	STAU1	99	71.912	Cavia_aperea
ENSGACG00000001352	stau1	72	70.659	ENSCPOG00000005566	STAU1	99	70.942	Cavia_porcellus
ENSGACG00000001352	stau1	94	72.885	ENSCCAG00000034339	STAU1	99	72.885	Cebus_capucinus
ENSGACG00000001352	stau1	96	75.161	ENSCATG00000028474	STAU1	99	75.161	Cercocebus_atys
ENSGACG00000001352	stau1	72	60.956	ENSCLAG00000002784	-	100	60.956	Chinchilla_lanigera
ENSGACG00000001352	stau1	72	73.653	ENSCLAG00000006516	-	99	73.948	Chinchilla_lanigera
ENSGACG00000001352	stau1	73	73.904	ENSCSAG00000014986	STAU1	99	73.904	Chlorocebus_sabaeus
ENSGACG00000001352	stau1	96	71.561	ENSCHOG00000001511	STAU1	99	73.129	Choloepus_hoffmanni
ENSGACG00000001352	stau1	99	72.262	ENSCPBG00000026741	STAU1	100	72.017	Chrysemys_picta_bellii
ENSGACG00000001352	stau1	96	71.508	ENSCANG00000039220	STAU1	99	73.077	Colobus_angolensis_palliatus
ENSGACG00000001352	stau1	72	69.860	ENSCGRG00001013453	Stau1	99	70.140	Cricetulus_griseus_chok1gshd
ENSGACG00000001352	stau1	72	69.860	ENSCGRG00000007216	Stau1	99	70.140	Cricetulus_griseus_crigri
ENSGACG00000001352	stau1	100	77.433	ENSCSEG00000000792	stau1	100	78.561	Cynoglossus_semilaevis
ENSGACG00000001352	stau1	93	84.585	ENSCVAG00000005906	stau1	99	85.375	Cyprinodon_variegatus
ENSGACG00000001352	stau1	100	79.683	ENSDARG00000044182	stau1	100	80.251	Danio_rerio
ENSGACG00000001352	stau1	96	71.561	ENSDNOG00000014933	STAU1	97	72.937	Dasypus_novemcinctus
ENSGACG00000001352	stau1	72	72.525	ENSDORG00000030220	Stau1	99	72.525	Dipodomys_ordii
ENSGACG00000001352	stau1	68	76.490	ENSETEG00000018235	STAU1	87	76.490	Echinops_telfairi
ENSGACG00000001352	stau1	94	73.077	ENSEASG00005023343	STAU1	99	73.077	Equus_asinus_asinus
ENSGACG00000001352	stau1	96	71.322	ENSECAG00000012894	STAU1	99	72.885	Equus_caballus
ENSGACG00000001352	stau1	57	77.157	ENSEEUG00000014344	STAU1	68	77.157	Erinaceus_europaeus
ENSGACG00000001352	stau1	99	82.411	ENSELUG00000002529	stau1	99	84.555	Esox_lucius
ENSGACG00000001352	stau1	96	71.508	ENSFCAG00000001447	STAU1	99	73.077	Felis_catus
ENSGACG00000001352	stau1	99	72.206	ENSFALG00000012940	STAU1	100	71.960	Ficedula_albicollis
ENSGACG00000001352	stau1	72	72.854	ENSFDAG00000014119	-	99	73.146	Fukomys_damarensis
ENSGACG00000001352	stau1	73	55.976	ENSFDAG00000020837	-	99	54.582	Fukomys_damarensis
ENSGACG00000001352	stau1	99	88.058	ENSFHEG00000013517	stau1	99	88.058	Fundulus_heteroclitus
ENSGACG00000001352	stau1	100	72.829	ENSGMOG00000016850	stau1	100	72.829	Gadus_morhua
ENSGACG00000001352	stau1	99	73.209	ENSGALG00000004736	STAU1	100	73.104	Gallus_gallus
ENSGACG00000001352	stau1	99	87.770	ENSGAFG00000010437	stau1	99	87.770	Gambusia_affinis
ENSGACG00000001352	stau1	99	72.884	ENSGAGG00000009825	STAU1	100	72.779	Gopherus_agassizii
ENSGACG00000001352	stau1	94	68.714	ENSGGOG00000025351	STAU1	99	77.222	Gorilla_gorilla
ENSGACG00000001352	stau1	100	91.053	ENSHBUG00000023668	stau1	100	91.053	Haplochromis_burtoni
ENSGACG00000001352	stau1	72	74.343	ENSHGLG00000008730	STAU1	99	74.343	Heterocephalus_glaber_female
ENSGACG00000001352	stau1	72	74.343	ENSHGLG00100000098	STAU1	99	74.343	Heterocephalus_glaber_male
ENSGACG00000001352	stau1	100	82.640	ENSHCOG00000018461	stau1	100	82.640	Hippocampus_comes
ENSGACG00000001352	stau1	100	76.232	ENSIPUG00000023725	stau1	100	76.232	Ictalurus_punctatus
ENSGACG00000001352	stau1	72	73.535	ENSSTOG00000003634	STAU1	99	73.535	Ictidomys_tridecemlineatus
ENSGACG00000001352	stau1	72	72.525	ENSJJAG00000020032	Stau1	99	72.525	Jaculus_jaculus
ENSGACG00000001352	stau1	99	84.726	ENSKMAG00000007135	stau1	99	85.735	Kryptolebias_marmoratus
ENSGACG00000001352	stau1	100	91.618	ENSLBEG00000020172	stau1	100	91.618	Labrus_bergylta
ENSGACG00000001352	stau1	98	72.806	ENSLACG00000016157	STAU1	97	72.806	Latimeria_chalumnae
ENSGACG00000001352	stau1	99	76.978	ENSLOCG00000003134	stau1	100	77.874	Lepisosteus_oculatus
ENSGACG00000001352	stau1	75	73.398	ENSLAFG00000003238	STAU1	99	73.398	Loxodonta_africana
ENSGACG00000001352	stau1	96	75.161	ENSMFAG00000040931	STAU1	99	77.407	Macaca_fascicularis
ENSGACG00000001352	stau1	94	68.714	ENSMMUG00000002302	STAU1	99	77.407	Macaca_mulatta
ENSGACG00000001352	stau1	96	74.207	ENSMNEG00000033821	STAU1	99	75.107	Macaca_nemestrina
ENSGACG00000001352	stau1	96	71.322	ENSMLEG00000031383	STAU1	99	72.885	Mandrillus_leucophaeus
ENSGACG00000001352	stau1	100	92.630	ENSMAMG00000017586	stau1	100	92.630	Mastacembelus_armatus
ENSGACG00000001352	stau1	100	91.185	ENSMZEG00005015605	stau1	100	91.185	Maylandia_zebra
ENSGACG00000001352	stau1	99	71.784	ENSMGAG00000004719	STAU1	99	71.784	Meleagris_gallopavo
ENSGACG00000001352	stau1	72	69.860	ENSMAUG00000013846	Stau1	99	70.140	Mesocricetus_auratus
ENSGACG00000001352	stau1	94	71.731	ENSMICG00000001995	STAU1	99	71.731	Microcebus_murinus
ENSGACG00000001352	stau1	72	70.259	ENSMOCG00000018743	Stau1	99	70.541	Microtus_ochrogaster
ENSGACG00000001352	stau1	100	88.312	ENSMMOG00000015455	stau1	100	88.312	Mola_mola
ENSGACG00000001352	stau1	96	72.296	ENSMODG00000016276	STAU1	99	72.296	Monodelphis_domestica
ENSGACG00000001352	stau1	100	91.618	ENSMALG00000000045	stau1	100	91.618	Monopterus_albus
ENSGACG00000001352	stau1	72	70.707	MGP_CAROLIEiJ_G0024699	Stau1	99	70.876	Mus_caroli
ENSGACG00000001352	stau1	72	70.505	ENSMUSG00000039536	Stau1	99	70.672	Mus_musculus
ENSGACG00000001352	stau1	72	70.101	MGP_PahariEiJ_G0026141	Stau1	99	70.101	Mus_pahari
ENSGACG00000001352	stau1	72	70.505	MGP_SPRETEiJ_G0025619	Stau1	99	70.672	Mus_spretus
ENSGACG00000001352	stau1	96	69.688	ENSMPUG00000017581	STAU1	99	69.688	Mustela_putorius_furo
ENSGACG00000001352	stau1	96	72.481	ENSMLUG00000008407	STAU1	97	72.481	Myotis_lucifugus
ENSGACG00000001352	stau1	72	71.257	ENSNGAG00000007108	Stau1	99	71.543	Nannospalax_galili
ENSGACG00000001352	stau1	100	91.053	ENSNBRG00000017596	stau1	100	91.053	Neolamprologus_brichardi
ENSGACG00000001352	stau1	96	71.322	ENSNLEG00000006955	STAU1	99	73.320	Nomascus_leucogenys
ENSGACG00000001352	stau1	67	77.538	ENSMEUG00000003263	STAU1	80	77.538	Notamacropus_eugenii
ENSGACG00000001352	stau1	93	67.949	ENSOPRG00000014569	STAU1	93	68.959	Ochotona_princeps
ENSGACG00000001352	stau1	73	73.307	ENSODEG00000006523	STAU1	99	73.307	Octodon_degus
ENSGACG00000001352	stau1	100	88.359	ENSONIG00000004152	stau1	99	88.359	Oreochromis_niloticus
ENSGACG00000001352	stau1	99	70.297	ENSOANG00000006394	STAU1	96	72.419	Ornithorhynchus_anatinus
ENSGACG00000001352	stau1	96	70.632	ENSOCUG00000006214	STAU1	99	72.308	Oryctolagus_cuniculus
ENSGACG00000001352	stau1	99	85.962	ENSOMEG00000002388	stau1	99	85.962	Oryzias_melastigma
ENSGACG00000001352	stau1	72	51.874	ENSOGAG00000028222	-	99	51.383	Otolemur_garnettii
ENSGACG00000001352	stau1	96	71.698	ENSOGAG00000002127	STAU1	97	72.500	Otolemur_garnettii
ENSGACG00000001352	stau1	96	70.019	ENSOARG00000012204	STAU1	97	71.538	Ovis_aries
ENSGACG00000001352	stau1	94	68.714	ENSPPAG00000032023	STAU1	99	77.222	Pan_paniscus
ENSGACG00000001352	stau1	96	71.508	ENSPPRG00000003436	STAU1	99	74.104	Panthera_pardus
ENSGACG00000001352	stau1	96	71.508	ENSPTIG00000011768	STAU1	99	73.228	Panthera_tigris_altaica
ENSGACG00000001352	stau1	94	68.714	ENSPTRG00000023130	STAU1	99	77.222	Pan_troglodytes
ENSGACG00000001352	stau1	96	75.161	ENSPANG00000020560	STAU1	99	75.161	Papio_anubis
ENSGACG00000001352	stau1	100	77.746	ENSPKIG00000024588	stau1	100	78.745	Paramormyrops_kingsleyae
ENSGACG00000001352	stau1	99	73.171	ENSPSIG00000010731	STAU1	99	73.209	Pelodiscus_sinensis
ENSGACG00000001352	stau1	99	84.770	ENSPMGG00000018553	stau1	100	84.648	Periophthalmus_magnuspinnatus
ENSGACG00000001352	stau1	72	70.259	ENSPEMG00000022045	Stau1	99	70.541	Peromyscus_maniculatus_bairdii
ENSGACG00000001352	stau1	99	70.270	ENSPCIG00000023269	STAU1	98	74.081	Phascolarctos_cinereus
ENSGACG00000001352	stau1	100	87.069	ENSPFOG00000017253	stau1	99	87.194	Poecilia_formosa
ENSGACG00000001352	stau1	58	86.352	ENSPLAG00000014829	stau1	96	83.586	Poecilia_latipinna
ENSGACG00000001352	stau1	99	83.885	ENSPMEG00000007495	stau1	99	83.885	Poecilia_mexicana
ENSGACG00000001352	stau1	100	87.069	ENSPREG00000003477	stau1	99	87.194	Poecilia_reticulata
ENSGACG00000001352	stau1	96	71.136	ENSPPYG00000011111	STAU1	99	72.692	Pongo_abelii
ENSGACG00000001352	stau1	74	64.356	ENSPCAG00000002459	STAU1	100	65.650	Procavia_capensis
ENSGACG00000001352	stau1	96	70.391	ENSPCOG00000027746	STAU1	99	72.332	Propithecus_coquereli
ENSGACG00000001352	stau1	84	77.815	ENSPVAG00000015019	STAU1	86	78.188	Pteropus_vampyrus
ENSGACG00000001352	stau1	100	91.053	ENSPNYG00000014436	stau1	100	91.053	Pundamilia_nyererei
ENSGACG00000001352	stau1	100	79.856	ENSPNAG00000011323	stau1	100	80.603	Pygocentrus_nattereri
ENSGACG00000001352	stau1	72	69.661	ENSRNOG00000007781	Stau1	99	69.940	Rattus_norvegicus
ENSGACG00000001352	stau1	73	73.031	ENSRBIG00000037345	STAU1	100	73.161	Rhinopithecus_bieti
ENSGACG00000001352	stau1	96	74.207	ENSRROG00000039008	STAU1	99	75.107	Rhinopithecus_roxellana
ENSGACG00000001352	stau1	94	72.885	ENSSBOG00000034448	STAU1	99	72.885	Saimiri_boliviensis_boliviensis
ENSGACG00000001352	stau1	96	72.626	ENSSHAG00000009492	STAU1	97	74.231	Sarcophilus_harrisii
ENSGACG00000001352	stau1	100	79.770	ENSSFOG00015021497	stau1	100	79.770	Scleropages_formosus
ENSGACG00000001352	stau1	100	91.618	ENSSMAG00000017410	stau1	100	91.618	Scophthalmus_maximus
ENSGACG00000001352	stau1	100	93.208	ENSSDUG00000019439	stau1	100	93.208	Seriola_dumerili
ENSGACG00000001352	stau1	100	93.497	ENSSLDG00000025040	stau1	100	93.497	Seriola_lalandi_dorsalis
ENSGACG00000001352	stau1	99	71.977	ENSSPUG00000017983	STAU1	99	73.156	Sphenodon_punctatus
ENSGACG00000001352	stau1	100	93.642	ENSSPAG00000019275	stau1	100	93.642	Stegastes_partitus
ENSGACG00000001352	stau1	96	70.950	ENSSSCG00000027444	STAU1	99	73.554	Sus_scrofa
ENSGACG00000001352	stau1	99	70.897	ENSTGUG00000008784	STAU1	100	70.799	Taeniopygia_guttata
ENSGACG00000001352	stau1	100	86.494	ENSTRUG00000005837	stau1	100	87.500	Takifugu_rubripes
ENSGACG00000001352	stau1	97	85.905	ENSTNIG00000014732	stau1	99	85.905	Tetraodon_nigroviridis
ENSGACG00000001352	stau1	96	60.223	ENSTBEG00000009404	STAU1	99	61.612	Tupaia_belangeri
ENSGACG00000001352	stau1	67	73.002	ENSTTRG00000004285	STAU1	80	73.002	Tursiops_truncatus
ENSGACG00000001352	stau1	73	72.047	ENSUAMG00000025449	STAU1	99	72.047	Ursus_americanus
ENSGACG00000001352	stau1	55	69.010	ENSUMAG00000024475	STAU1	89	69.010	Ursus_maritimus
ENSGACG00000001352	stau1	96	71.136	ENSVPAG00000001313	STAU1	99	72.692	Vicugna_pacos
ENSGACG00000001352	stau1	96	68.805	ENSVVUG00000022325	STAU1	99	68.805	Vulpes_vulpes
ENSGACG00000001352	stau1	97	70.920	ENSXETG00000001783	stau1	96	70.920	Xenopus_tropicalis
ENSGACG00000001352	stau1	56	85.128	ENSXCOG00000008804	stau1	98	85.385	Xiphophorus_couchianus
ENSGACG00000001352	stau1	99	86.906	ENSXMAG00000016175	stau1	99	86.906	Xiphophorus_maculatus