EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7184 bases
Position: chrscaffold_1063:13-7196
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	1	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	2	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	3	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	4	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	5	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	6	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	7	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	8	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	9	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	10	11
ENSGACP00000001760	zf-C2H2	PF00096.26	4.5e-70	11	11
ENSGACP00000001760	zf-met	PF12874.7	4.8e-26	1	4
ENSGACP00000001760	zf-met	PF12874.7	4.8e-26	2	4
ENSGACP00000001760	zf-met	PF12874.7	4.8e-26	3	4
ENSGACP00000001760	zf-met	PF12874.7	4.8e-26	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001761	-	1641	-	ENSGACP00000001760	547 (aa)	-	G3N8X3

Gene Model

Click here to download ENSGACG00000001358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001358	-	100	44.872	ENSGACG00000012517	-	100	47.325
ENSGACG00000001358	-	98	46.774	ENSGACG00000001618	-	83	42.857
ENSGACG00000001358	-	99	51.546	ENSGACG00000005239	-	91	49.817
ENSGACG00000001358	-	100	40.288	ENSGACG00000011187	zbtb48	56	36.863
ENSGACG00000001358	-	99	46.154	ENSGACG00000018088	si:dkey-7i4.5	99	46.154
ENSGACG00000001358	-	99	41.250	ENSGACG00000011808	e4f1	59	41.176
ENSGACG00000001358	-	99	41.772	ENSGACG00000001879	znf384l	51	41.772
ENSGACG00000001358	-	100	31.226	ENSGACG00000009449	znf526	96	31.877
ENSGACG00000001358	-	99	45.161	ENSGACG00000004072	-	57	45.161
ENSGACG00000001358	-	99	46.939	ENSGACG00000014395	-	100	46.939
ENSGACG00000001358	-	99	45.732	ENSGACG00000015674	gfi1aa	56	45.732
ENSGACG00000001358	-	97	32.597	ENSGACG00000006824	znf131	57	30.275
ENSGACG00000001358	-	99	41.398	ENSGACG00000003372	zbtb47b	58	41.398
ENSGACG00000001358	-	100	61.491	ENSGACG00000004549	-	99	53.774
ENSGACG00000001358	-	99	36.275	ENSGACG00000002626	si:ch211-216l23.1	96	39.815
ENSGACG00000001358	-	99	41.250	ENSGACG00000001166	-	100	41.250
ENSGACG00000001358	-	100	43.421	ENSGACG00000014714	si:dkey-89b17.4	99	43.421
ENSGACG00000001358	-	99	44.505	ENSGACG00000018415	-	99	44.505
ENSGACG00000001358	-	99	41.989	ENSGACG00000005742	-	60	41.989
ENSGACG00000001358	-	96	38.623	ENSGACG00000012611	-	86	38.623
ENSGACG00000001358	-	100	55.432	ENSGACG00000004478	-	100	54.727
ENSGACG00000001358	-	99	48.077	ENSGACG00000010051	-	99	45.756
ENSGACG00000001358	-	100	34.389	ENSGACG00000008733	znf646	99	33.880
ENSGACG00000001358	-	100	33.696	ENSGACG00000020411	hinfp	63	33.696
ENSGACG00000001358	-	100	50.000	ENSGACG00000005553	znf236	99	50.000
ENSGACG00000001358	-	100	43.396	ENSGACG00000014840	maza	87	43.396
ENSGACG00000001358	-	99	46.358	ENSGACG00000004257	gfi1ab	52	46.358
ENSGACG00000001358	-	100	56.364	ENSGACG00000004765	-	100	56.364
ENSGACG00000001358	-	100	56.792	ENSGACG00000004761	-	100	62.500
ENSGACG00000001358	-	100	32.714	ENSGACG00000003258	znf319b	93	32.995
ENSGACG00000001358	-	100	66.079	ENSGACG00000013652	-	97	66.079
ENSGACG00000001358	-	100	62.416	ENSGACG00000013659	-	99	62.416
ENSGACG00000001358	-	100	46.541	ENSGACG00000018134	gfi1b	64	46.541
ENSGACG00000001358	-	100	37.556	ENSGACG00000010515	ZNF628	99	38.974
ENSGACG00000001358	-	99	44.654	ENSGACG00000019550	-	96	44.654
ENSGACG00000001358	-	100	46.774	ENSGACG00000008982	scrt1b	54	46.774
ENSGACG00000001358	-	100	40.400	ENSGACG00000018816	-	100	39.205
ENSGACG00000001358	-	100	50.000	ENSGACG00000006283	-	96	50.000
ENSGACG00000001358	-	100	76.202	ENSGACG00000013660	-	100	76.202
ENSGACG00000001358	-	100	43.891	ENSGACG00000001523	-	99	43.891
ENSGACG00000001358	-	100	45.833	ENSGACG00000010147	snai1a	61	45.833
ENSGACG00000001358	-	100	39.683	ENSGACG00000019863	-	99	39.683
ENSGACG00000001358	-	99	45.683	ENSGACG00000010384	-	100	45.683
ENSGACG00000001358	-	99	45.143	ENSGACG00000016248	-	100	43.269
ENSGACG00000001358	-	100	36.543	ENSGACG00000001377	-	93	36.543
ENSGACG00000001358	-	100	39.594	ENSGACG00000001371	-	100	38.800
ENSGACG00000001358	-	100	56.497	ENSGACG00000010393	-	100	57.143
ENSGACG00000001358	-	99	46.875	ENSGACG00000012415	GZF1	99	46.875
ENSGACG00000001358	-	99	42.466	ENSGACG00000017935	snai2	64	41.892
ENSGACG00000001358	-	87	42.529	ENSGACG00000018794	ovol1a	69	42.529
ENSGACG00000001358	-	100	46.311	ENSGACG00000010352	si:ch211-207i20.2	61	45.745
ENSGACG00000001358	-	100	36.856	ENSGACG00000015729	-	98	36.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001358	-	99	48.182	ENSDNOG00000038646	-	98	47.448	Dasypus_novemcinctus
ENSGACG00000001358	-	99	31.548	ENSELUG00000016988	-	94	31.548	Esox_lucius
ENSGACG00000001358	-	100	40.838	ENSMOCG00000007791	-	74	41.379	Microtus_ochrogaster
ENSGACG00000001358	-	99	53.680	ENSMMOG00000018975	-	98	50.833	Mola_mola
ENSGACG00000001358	-	100	33.889	ENSORLG00015011171	-	64	34.595	Oryzias_latipes_hsok
ENSGACG00000001358	-	99	44.981	ENSOGAG00000029772	-	93	44.981	Otolemur_garnettii