EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGACG00000001438 (Gene tree)
Gene ID
-
Gene Symbol
rrp1
Alias
Nop52|cb43|nnp1|sb:cb43|wu:fb37f12|wu:fi05d01
Full Name
ribosomal RNA processing 1
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
14031 bases
Position
chrgroupXVI:125393-139423
Accession
ZDB-GENE-030131-9837
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000001865Nop52PF05997.126.1e-6211
ENSGACP00000001869Nop52PF05997.126.8e-6211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000001872-1979-ENSGACP00000001869655 (aa)-G3N979
ENSGACT00000001867-1865-ENSGACP00000001865615 (aa)-G3N976
Gene Model
Click here to download ENSGACG00000001438's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001438's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000001438rrp15248.521ENSG00000160214RRP17862.857Homo_sapiens
ENSGACG00000001438rrp17942.424ENSG00000160208RRP1B9934.771Homo_sapiens
ENSGACG00000001438rrp18661.659ENSAPOG00000007490-6169.681Acanthochromis_polyacanthus
ENSGACG00000001438rrp17245.385ENSAMEG00000011401RRP1B6645.736Ailuropoda_melanoleuca
ENSGACG00000001438rrp15746.237ENSAMEG00000011448RRP18346.114Ailuropoda_melanoleuca
ENSGACG00000001438rrp18161.036ENSAOCG00000017894-10071.479Amphiprion_ocellaris
ENSGACG00000001438rrp18661.036ENSAPEG00000024150-6563.326Amphiprion_percula
ENSGACG00000001438rrp17767.595ENSATEG00000005045-6866.033Anabas_testudineus
ENSGACG00000001438rrp16549.068ENSAPLG00000004310RRP1B10035.870Anas_platyrhynchos
ENSGACG00000001438rrp17450.000ENSACAG00000017851RRP1B6648.493Anolis_carolinensis
ENSGACG00000001438rrp19933.862ENSANAG00000034889RRP1B9933.995Aotus_nancymaae
ENSGACG00000001438rrp15046.809ENSANAG00000037815RRP17548.024Aotus_nancymaae
ENSGACG00000001438rrp15642.265ENSBTAG00000003981RRP18442.147Bos_taurus
ENSGACG00000001438rrp17149.206ENSBTAG00000017418RRP1B6549.206Bos_taurus
ENSGACG00000001438rrp15249.558ENSCJAG00000043205RRP17049.558Callithrix_jacchus
ENSGACG00000001438rrp19933.554ENSCJAG00000017077RRP1B9933.554Callithrix_jacchus
ENSGACG00000001438rrp15944.588ENSCAFG00000010646RRP18742.280Canis_familiaris
ENSGACG00000001438rrp16845.714ENSCAFG00000010621RRP1B6448.837Canis_familiaris
ENSGACG00000001438rrp17545.714ENSCAFG00020018901RRP1B6848.837Canis_lupus_dingo
ENSGACG00000001438rrp15944.588ENSCAFG00020018979RRP18344.987Canis_lupus_dingo
ENSGACG00000001438rrp17148.819ENSCHIG00000021519RRP1B6548.819Capra_hircus
ENSGACG00000001438rrp15543.490ENSCHIG00000020948RRP18044.875Capra_hircus
ENSGACG00000001438rrp15245.821ENSTSYG00000012831RRP17745.690Carlito_syrichta
ENSGACG00000001438rrp110034.683ENSCPOG00000002396RRP1B10035.318Cavia_porcellus
ENSGACG00000001438rrp15248.824ENSCPOG00000038986RRP18645.052Cavia_porcellus
ENSGACG00000001438rrp15249.408ENSCCAG00000029828RRP18544.221Cebus_capucinus
ENSGACG00000001438rrp17545.139ENSCCAG00000029384RRP1B7342.149Cebus_capucinus
ENSGACG00000001438rrp19643.972ENSCATG00000017423RRP1B8543.972Cercocebus_atys
ENSGACG00000001438rrp15247.965ENSCATG00000015632RRP17449.412Cercocebus_atys
ENSGACG00000001438rrp16848.387ENSCLAG00000005622RRP1B10033.548Chinchilla_lanigera
ENSGACG00000001438rrp15248.503ENSCLAG00000011639RRP17548.503Chinchilla_lanigera
ENSGACG00000001438rrp19544.681ENSCSAG00000007961RRP1B8444.681Chlorocebus_sabaeus
ENSGACG00000001438rrp15139.506ENSCHOG00000002426-5439.506Choloepus_hoffmanni
ENSGACG00000001438rrp17752.273ENSCPBG00000010310RRP1B9937.769Chrysemys_picta_bellii
ENSGACG00000001438rrp15435.882ENSCING00000003304-7636.119Ciona_intestinalis
ENSGACG00000001438rrp17544.681ENSCANG00000040952RRP1B9934.115Colobus_angolensis_palliatus
ENSGACG00000001438rrp16748.092ENSCGRG00001010889-6844.595Cricetulus_griseus_chok1gshd
ENSGACG00000001438rrp16944.595ENSCGRG00001023882-7256.471Cricetulus_griseus_chok1gshd
ENSGACG00000001438rrp15248.105ENSCGRG00001011920Rrp19042.118Cricetulus_griseus_chok1gshd
ENSGACG00000001438rrp15248.105ENSCGRG00000008915Rrp19042.118Cricetulus_griseus_crigri
ENSGACG00000001438rrp16148.092ENSCGRG00000001553Rrp1b6248.092Cricetulus_griseus_crigri
ENSGACG00000001438rrp110048.353ENSCSEG00000020711-8859.574Cynoglossus_semilaevis
ENSGACG00000001438rrp15963.757ENSCVAG00000017568-9664.116Cyprinodon_variegatus
ENSGACG00000001438rrp19943.372ENSDARG00000103337rrp19945.259Danio_rerio
ENSGACG00000001438rrp16044.560ENSDNOG00000019880RRP18344.560Dasypus_novemcinctus
ENSGACG00000001438rrp17946.099ENSDNOG00000032774RRP1B7546.099Dasypus_novemcinctus
ENSGACG00000001438rrp15848.760ENSDORG00000005496Rrp1b6347.244Dipodomys_ordii
ENSGACG00000001438rrp17254.118ENSETEG00000019489RRP1B6454.118Echinops_telfairi
ENSGACG00000001438rrp17347.287ENSEASG00005001687RRP1B6547.287Equus_asinus_asinus
ENSGACG00000001438rrp15246.765ENSEASG00005001673RRP18543.979Equus_asinus_asinus
ENSGACG00000001438rrp17348.062ENSECAG00000018018RRP1B6548.062Equus_caballus
ENSGACG00000001438rrp15247.059ENSECAG00000015703RRP18543.979Equus_caballus
ENSGACG00000001438rrp17463.021ENSELUG00000015885-9160.366Esox_lucius
ENSGACG00000001438rrp17345.802ENSFCAG00000010272RRP1B6746.565Felis_catus
ENSGACG00000001438rrp15747.645ENSFCAG00000008434RRP18147.645Felis_catus
ENSGACG00000001438rrp16646.786ENSFALG00000002024RRP1B6547.492Ficedula_albicollis
ENSGACG00000001438rrp19431.293ENSFDAG00000010899RRP1B9431.837Fukomys_damarensis
ENSGACG00000001438rrp15249.849ENSFDAG00000013728RRP17451.543Fukomys_damarensis
ENSGACG00000001438rrp17365.266ENSFHEG00000016314-6163.099Fundulus_heteroclitus
ENSGACG00000001438rrp17175.000ENSGMOG00000001953-7075.000Gadus_morhua
ENSGACG00000001438rrp17848.493ENSGALG00000035696RRP1B9736.849Gallus_gallus
ENSGACG00000001438rrp17751.695ENSGAGG00000000375RRP1B9939.164Gopherus_agassizii
ENSGACG00000001438rrp15249.112ENSGGOG00000000173RRP18544.279Gorilla_gorilla
ENSGACG00000001438rrp19934.726ENSGGOG00000012069RRP1B9935.117Gorilla_gorilla
ENSGACG00000001438rrp16761.039ENSHBUG00000003766-6460.199Haplochromis_burtoni
ENSGACG00000001438rrp17248.333ENSHGLG00000004968RRP1B6549.573Heterocephalus_glaber_female
ENSGACG00000001438rrp15250.926ENSHGLG00000017085RRP17150.926Heterocephalus_glaber_female
ENSGACG00000001438rrp16147.899ENSHGLG00100002232RRP1B5649.138Heterocephalus_glaber_male
ENSGACG00000001438rrp17960.000ENSHCOG00000018388-7157.598Hippocampus_comes
ENSGACG00000001438rrp17160.714ENSIPUG00000000673-7254.011Ictalurus_punctatus
ENSGACG00000001438rrp17242.939ENSSTOG00000011790RRP1B9632.941Ictidomys_tridecemlineatus
ENSGACG00000001438rrp15943.392ENSSTOG00000011116RRP18645.504Ictidomys_tridecemlineatus
ENSGACG00000001438rrp15250.305ENSJJAG00000018886Rrp18348.056Jaculus_jaculus
ENSGACG00000001438rrp17041.892ENSJJAG00000021279Rrp1b6544.218Jaculus_jaculus
ENSGACG00000001438rrp15963.342ENSKMAG00000005539rrp110053.219Kryptolebias_marmoratus
ENSGACG00000001438rrp15466.848ENSLBEG00000021417RRP19965.152Labrus_bergylta
ENSGACG00000001438rrp17746.717ENSLACG00000017332-9936.653Latimeria_chalumnae
ENSGACG00000001438rrp16958.551ENSLOCG00000004064-9941.835Lepisosteus_oculatus
ENSGACG00000001438rrp18242.963ENSLAFG00000000766RRP1B9639.706Loxodonta_africana
ENSGACG00000001438rrp15750.403ENSLAFG00000022901RRP18941.814Loxodonta_africana
ENSGACG00000001438rrp15248.961ENSMFAG00000003202RRP17448.673Macaca_fascicularis
ENSGACG00000001438rrp19644.681ENSMFAG00000039152RRP1B8544.681Macaca_fascicularis
ENSGACG00000001438rrp18952.747ENSMMUG00000000104RRP1B7952.747Macaca_mulatta
ENSGACG00000001438rrp15249.263ENSMMUG00000012304RRP17449.263Macaca_mulatta
ENSGACG00000001438rrp15250.000ENSMNEG00000031210RRP17449.263Macaca_nemestrina
ENSGACG00000001438rrp19643.972ENSMNEG00000034269RRP1B8543.972Macaca_nemestrina
ENSGACG00000001438rrp18944.681ENSMLEG00000040044RRP1B8344.681Mandrillus_leucophaeus
ENSGACG00000001438rrp17871.582ENSMAMG00000007131-6363.496Mastacembelus_armatus
ENSGACG00000001438rrp17750.450ENSMGAG00000014591RRP1B9736.243Meleagris_gallopavo
ENSGACG00000001438rrp19931.720ENSMAUG00000021508Rrp1b5337.659Mesocricetus_auratus
ENSGACG00000001438rrp15240.176ENSMAUG00000017653Rrp18937.500Mesocricetus_auratus
ENSGACG00000001438rrp110034.387ENSMICG00000004686RRP1B6948.000Microcebus_murinus
ENSGACG00000001438rrp15249.118ENSMICG00000004700RRP17848.830Microcebus_murinus
ENSGACG00000001438rrp16948.855ENSMOCG00000001117Rrp1b7248.855Microtus_ochrogaster
ENSGACG00000001438rrp15661.644ENSMMOG00000019175rrp19659.686Mola_mola
ENSGACG00000001438rrp17146.512ENSMODG00000021033RRP1B6847.682Monodelphis_domestica
ENSGACG00000001438rrp15247.493ENSMODG00000021036-5744.591Monodelphis_domestica
ENSGACG00000001438rrp15970.496ENSMALG00000010310rrp19970.496Monopterus_albus
ENSGACG00000001438rrp17149.231MGP_CAROLIEiJ_G0021376Rrp1b7249.231Mus_caroli
ENSGACG00000001438rrp15241.919MGP_CAROLIEiJ_G0015508Rrp18043.687Mus_caroli
ENSGACG00000001438rrp16848.462ENSMUSG00000058392Rrp1b9934.182Mus_musculus
ENSGACG00000001438rrp15252.778ENSMUSG00000061032Rrp18043.939Mus_musculus
ENSGACG00000001438rrp15252.778MGP_PahariEiJ_G0030921Rrp18043.216Mus_pahari
ENSGACG00000001438rrp17247.692MGP_PahariEiJ_G0023695Rrp1b5860.294Mus_pahari
ENSGACG00000001438rrp16648.462MGP_SPRETEiJ_G0022290Rrp1b5861.765Mus_spretus
ENSGACG00000001438rrp15056.667MGP_SPRETEiJ_G0016321Rrp18043.687Mus_spretus
ENSGACG00000001438rrp15951.163ENSMPUG00000009826RRP17551.163Mustela_putorius_furo
ENSGACG00000001438rrp17343.846ENSMLUG00000007738RRP1B6643.846Myotis_lucifugus
ENSGACG00000001438rrp17147.857ENSNGAG00000021073Rrp1b9933.422Nannospalax_galili
ENSGACG00000001438rrp15249.112ENSNLEG00000034734RRP18543.284Nomascus_leucogenys
ENSGACG00000001438rrp18642.149ENSNLEG00000001490RRP1B9935.753Nomascus_leucogenys
ENSGACG00000001438rrp15455.652ENSMEUG00000003226-5955.652Notamacropus_eugenii
ENSGACG00000001438rrp15244.062ENSOPRG00000001319RRP19244.375Ochotona_princeps
ENSGACG00000001438rrp110033.153ENSODEG00000013177RRP1B6545.968Octodon_degus
ENSGACG00000001438rrp16967.066ENSONIG00000004264rrp19948.429Oreochromis_niloticus
ENSGACG00000001438rrp17849.219ENSOANG00000006470RRP1B6949.219Ornithorhynchus_anatinus
ENSGACG00000001438rrp15748.199ENSOANG00000006472-9348.199Ornithorhynchus_anatinus
ENSGACG00000001438rrp16541.216ENSOCUG00000025931RRP1B6541.216Oryctolagus_cuniculus
ENSGACG00000001438rrp18061.347ENSORLG00020007199-6263.488Oryzias_latipes_hni
ENSGACG00000001438rrp17665.301ENSORLG00015004425-6263.315Oryzias_latipes_hsok
ENSGACG00000001438rrp18063.980ENSOMEG00000016910-8461.538Oryzias_melastigma
ENSGACG00000001438rrp15247.368ENSOGAG00000006105RRP17750.000Otolemur_garnettii
ENSGACG00000001438rrp17346.721ENSOGAG00000009872RRP1B9937.460Otolemur_garnettii
ENSGACG00000001438rrp16349.524ENSOARG00000011314RRP1B6049.524Ovis_aries
ENSGACG00000001438rrp16945.833ENSPPAG00000035319RRP1B9933.563Pan_paniscus
ENSGACG00000001438rrp15248.817ENSPPAG00000029050RRP18544.030Pan_paniscus
ENSGACG00000001438rrp17345.802ENSPPRG00000010356RRP1B7044.805Panthera_pardus
ENSGACG00000001438rrp15947.170ENSPPRG00000010656RRP18445.953Panthera_pardus
ENSGACG00000001438rrp17142.484ENSPTIG00000016894RRP1B9735.566Panthera_tigris_altaica
ENSGACG00000001438rrp15340.525ENSPTIG00000019473RRP18139.437Panthera_tigris_altaica
ENSGACG00000001438rrp15249.112ENSPTRG00000013962RRP18544.279Pan_troglodytes
ENSGACG00000001438rrp17942.424ENSPTRG00000013958RRP1B9934.641Pan_troglodytes
ENSGACG00000001438rrp15248.673ENSPANG00000015097RRP17449.706Papio_anubis
ENSGACG00000001438rrp19643.972ENSPANG00000011090RRP1B8544.681Papio_anubis
ENSGACG00000001438rrp18457.516ENSPKIG00000003422-8447.926Paramormyrops_kingsleyae
ENSGACG00000001438rrp17851.667ENSPSIG00000008152RRP1B9539.211Pelodiscus_sinensis
ENSGACG00000001438rrp15654.545ENSPMGG00000007512-9452.688Periophthalmus_magnuspinnatus
ENSGACG00000001438rrp17548.092ENSPEMG00000022490Rrp1b6948.092Peromyscus_maniculatus_bairdii
ENSGACG00000001438rrp15249.258ENSPEMG00000018421Rrp19039.387Peromyscus_maniculatus_bairdii
ENSGACG00000001438rrp15348.830ENSPCIG00000015523-7548.830Phascolarctos_cinereus
ENSGACG00000001438rrp17645.504ENSPCIG00000015513RRP1B10037.313Phascolarctos_cinereus
ENSGACG00000001438rrp17765.625ENSPFOG00000007424-9948.096Poecilia_formosa
ENSGACG00000001438rrp15966.319ENSPLAG00000016684-5566.494Poecilia_latipinna
ENSGACG00000001438rrp19357.676ENSPMEG00000007042-8057.851Poecilia_mexicana
ENSGACG00000001438rrp19964.660ENSPREG00000015673-9264.474Poecilia_reticulata
ENSGACG00000001438rrp17942.623ENSPPYG00000011470RRP1B10035.065Pongo_abelii
ENSGACG00000001438rrp15248.521ENSPPYG00000011474RRP17448.235Pongo_abelii
ENSGACG00000001438rrp15550.538ENSPCAG00000013723RRP1B6250.538Procavia_capensis
ENSGACG00000001438rrp17848.000ENSPCOG00000017927RRP1B7148.000Propithecus_coquereli
ENSGACG00000001438rrp16141.475ENSPCOG00000017706RRP18844.110Propithecus_coquereli
ENSGACG00000001438rrp15749.153ENSPVAG00000001436RRP1B5049.153Pteropus_vampyrus
ENSGACG00000001438rrp15246.647ENSRNOG00000001203Rrp17848.547Rattus_norvegicus
ENSGACG00000001438rrp19933.645ENSRNOG00000001194Rrp1b9933.333Rattus_norvegicus
ENSGACG00000001438rrp15248.378ENSRBIG00000032082RRP17449.558Rhinopithecus_bieti
ENSGACG00000001438rrp19844.681ENSRBIG00000041689RRP1B10032.727Rhinopithecus_bieti
ENSGACG00000001438rrp19844.681ENSRROG00000031499RRP1B9934.248Rhinopithecus_roxellana
ENSGACG00000001438rrp15248.378ENSRROG00000039799RRP17449.558Rhinopithecus_roxellana
ENSGACG00000001438rrp16944.444ENSSBOG00000034727RRP1B6644.444Saimiri_boliviensis_boliviensis
ENSGACG00000001438rrp15251.090ENSSBOG00000034689RRP17451.090Saimiri_boliviensis_boliviensis
ENSGACG00000001438rrp17347.552ENSSHAG00000017789RRP1B6551.163Sarcophilus_harrisii
ENSGACG00000001438rrp17064.567ENSSFOG00015003932-6764.567Scleropages_formosus
ENSGACG00000001438rrp17769.845ENSSMAG00000016847-9267.876Scophthalmus_maximus
ENSGACG00000001438rrp110058.333ENSSDUG00000000551-8558.333Seriola_dumerili
ENSGACG00000001438rrp110057.843ENSSLDG00000002538-8557.843Seriola_lalandi_dorsalis
ENSGACG00000001438rrp16048.062ENSSARG00000003108-6148.062Sorex_araneus
ENSGACG00000001438rrp17447.592ENSSPUG00000002834RRP1B6946.113Sphenodon_punctatus
ENSGACG00000001438rrp17868.557ENSSPAG00000005370-6267.971Stegastes_partitus
ENSGACG00000001438rrp15844.772ENSSSCG00000037061RRP18345.187Sus_scrofa
ENSGACG00000001438rrp16756.471ENSSSCG00000021698RRP1B6556.471Sus_scrofa
ENSGACG00000001438rrp17049.191ENSTGUG00000005926RRP1B6749.371Taeniopygia_guttata
ENSGACG00000001438rrp15463.889ENSTRUG00000017592rrp110063.889Takifugu_rubripes
ENSGACG00000001438rrp19753.105ENSTNIG00000005053rrp19753.659Tetraodon_nigroviridis
ENSGACG00000001438rrp19333.756ENSTBEG00000000422RRP1B10033.756Tupaia_belangeri
ENSGACG00000001438rrp17941.912ENSTTRG00000000723RRP1B6842.618Tursiops_truncatus
ENSGACG00000001438rrp17345.385ENSUAMG00000026765RRP1B9936.131Ursus_americanus
ENSGACG00000001438rrp15343.768ENSUMAG00000025507RRP18343.077Ursus_maritimus
ENSGACG00000001438rrp16646.457ENSUMAG00000025510RRP1B8646.032Ursus_maritimus
ENSGACG00000001438rrp17342.724ENSVVUG00000024509RRP1B6745.912Vulpes_vulpes
ENSGACG00000001438rrp110038.756ENSXETG00000013683rrp1b10038.756Xenopus_tropicalis
ENSGACG00000001438rrp18062.899ENSXMAG00000023123-7557.522Xiphophorus_maculatus

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