EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSGACG00000001440 (Gene tree)
Gene ID: -
Gene Symbol: cpsf3
Alias: si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name: cleavage and polyadenylation specific factor 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5433 bases
Position: chrscaffold_269:5488-10920
Accession: ZDB-GENE-030131-3275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001892	CPSF73-100_C	PF11718.8	2.4e-53	1	1
ENSGACP00000001892	Beta-Casp	PF10996.8	9.7e-34	1	1
ENSGACP00000001892	Lactamase_B	PF00753.27	1.3e-18	1	1
ENSGACP00000001892	RMMBL	PF07521.12	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001895	-	2280	-	ENSGACP00000001892	686 (aa)	-	G3N9A2

Gene Model

Click here to download ENSGACG00000001440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001440	cpsf3	99	87.209	ENSGACG00000008929	CPSF3	99	87.209
ENSGACG00000001440	cpsf3	65	39.693	ENSGACG00000011260	ints11	74	39.693