EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001464 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 16305 bases
Position: chrscaffold_111:164824-181128
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001900	tRNA-synt_1g	PF09334.11	9.7e-17	1	2
ENSGACP00000001900	tRNA-synt_1g	PF09334.11	9.7e-17	2	2
ENSGACP00000001900	Anticodon_1	PF08264.13	3.9e-34	1	1
ENSGACP00000001900	tRNA-synt_1	PF00133.22	6.3e-197	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001903	-	3074	-	ENSGACP00000001900	984 (aa)	-	G3N9B0

Gene Model

Click here to download ENSGACG00000001464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001464	vars2	97	50.360	ENSGACG00000009601	vars	79	50.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001464	vars2	100	79.249	ENSAPOG00000007396	vars2	93	79.249	Acanthochromis_polyacanthus
ENSGACG00000001464	vars2	99	53.955	ENSAMEG00000012997	VARS2	89	53.955	Ailuropoda_melanoleuca
ENSGACG00000001464	vars2	100	79.403	ENSACIG00000004344	vars2	95	79.403	Amphilophus_citrinellus
ENSGACG00000001464	vars2	100	80.336	ENSAOCG00000000476	vars2	93	80.336	Amphiprion_ocellaris
ENSGACG00000001464	vars2	100	79.941	ENSAPEG00000008646	vars2	91	79.941	Amphiprion_percula
ENSGACG00000001464	vars2	100	81.891	ENSATEG00000012291	vars2	94	81.891	Anabas_testudineus
ENSGACG00000001464	vars2	99	53.947	ENSACAG00000022093	VARS2	91	53.947	Anolis_carolinensis
ENSGACG00000001464	vars2	99	52.626	ENSANAG00000038018	VARS2	92	52.626	Aotus_nancymaae
ENSGACG00000001464	vars2	100	77.098	ENSACLG00000018673	vars2	94	77.098	Astatotilapia_calliptera
ENSGACG00000001464	vars2	99	71.188	ENSAMXG00000017773	vars2	91	73.825	Astyanax_mexicanus
ENSGACG00000001464	vars2	99	54.462	ENSBTAG00000010698	VARS2	92	54.462	Bos_taurus
ENSGACG00000001464	vars2	99	52.929	ENSCJAG00000019826	VARS2	92	53.030	Callithrix_jacchus
ENSGACG00000001464	vars2	99	54.260	ENSCAFG00000000454	VARS2	87	55.485	Canis_familiaris
ENSGACG00000001464	vars2	86	59.342	ENSCAFG00020019387	VARS2	89	58.382	Canis_lupus_dingo
ENSGACG00000001464	vars2	99	54.462	ENSCHIG00000007847	VARS2	92	54.462	Capra_hircus
ENSGACG00000001464	vars2	99	54.260	ENSTSYG00000009904	VARS2	92	54.260	Carlito_syrichta
ENSGACG00000001464	vars2	94	53.961	ENSCAPG00000017770	VARS2	94	55.367	Cavia_aperea
ENSGACG00000001464	vars2	99	53.753	ENSCPOG00000021834	VARS2	87	55.165	Cavia_porcellus
ENSGACG00000001464	vars2	99	52.424	ENSCCAG00000037907	VARS2	92	52.626	Cebus_capucinus
ENSGACG00000001464	vars2	99	53.448	ENSCATG00000032554	VARS2	92	53.651	Cercocebus_atys
ENSGACG00000001464	vars2	99	54.150	ENSCLAG00000002889	VARS2	91	54.150	Chinchilla_lanigera
ENSGACG00000001464	vars2	99	53.550	ENSCSAG00000008327	VARS2	92	53.753	Chlorocebus_sabaeus
ENSGACG00000001464	vars2	98	55.190	ENSCPBG00000021502	VARS2	96	55.190	Chrysemys_picta_bellii
ENSGACG00000001464	vars2	99	53.245	ENSCANG00000014991	VARS2	91	53.448	Colobus_angolensis_palliatus
ENSGACG00000001464	vars2	99	53.604	ENSCGRG00001021535	Vars2	92	53.604	Cricetulus_griseus_chok1gshd
ENSGACG00000001464	vars2	99	53.604	ENSCGRG00000014112	Vars2	92	53.604	Cricetulus_griseus_crigri
ENSGACG00000001464	vars2	87	80.940	ENSCSEG00000015432	vars2	90	80.940	Cynoglossus_semilaevis
ENSGACG00000001464	vars2	70	77.195	ENSCVAG00000017765	vars2	98	77.195	Cyprinodon_variegatus
ENSGACG00000001464	vars2	99	68.800	ENSDARG00000056717	vars2	94	68.800	Danio_rerio
ENSGACG00000001464	vars2	85	51.469	ENSDORG00000008516	Vars2	93	51.469	Dipodomys_ordii
ENSGACG00000001464	vars2	99	47.513	ENSETEG00000014844	VARS2	92	47.513	Echinops_telfairi
ENSGACG00000001464	vars2	99	53.683	ENSEASG00005019997	VARS2	94	55.489	Equus_asinus_asinus
ENSGACG00000001464	vars2	99	54.289	ENSECAG00000018202	VARS2	92	54.087	Equus_caballus
ENSGACG00000001464	vars2	66	58.416	ENSEEUG00000012591	-	61	57.843	Erinaceus_europaeus
ENSGACG00000001464	vars2	99	70.305	ENSELUG00000017824	vars2	93	70.305	Esox_lucius
ENSGACG00000001464	vars2	99	53.854	ENSFCAG00000010531	VARS2	87	55.165	Felis_catus
ENSGACG00000001464	vars2	99	53.550	ENSFDAG00000017216	VARS2	92	53.550	Fukomys_damarensis
ENSGACG00000001464	vars2	93	74.946	ENSFHEG00000013932	vars2	91	74.946	Fundulus_heteroclitus
ENSGACG00000001464	vars2	97	71.028	ENSGMOG00000018960	vars2	99	71.028	Gadus_morhua
ENSGACG00000001464	vars2	89	75.931	ENSGAFG00000004737	vars2	90	75.931	Gambusia_affinis
ENSGACG00000001464	vars2	98	55.374	ENSGAGG00000011652	VARS2	98	55.374	Gopherus_agassizii
ENSGACG00000001464	vars2	99	53.043	ENSGGOG00000014587	VARS2	92	53.245	Gorilla_gorilla
ENSGACG00000001464	vars2	97	76.673	ENSHBUG00000002448	vars2	95	76.673	Haplochromis_burtoni
ENSGACG00000001464	vars2	99	53.854	ENSHGLG00000012886	VARS2	88	53.955	Heterocephalus_glaber_female
ENSGACG00000001464	vars2	99	53.753	ENSHGLG00100016535	VARS2	92	53.854	Heterocephalus_glaber_male
ENSGACG00000001464	vars2	72	77.317	ENSHCOG00000017907	vars2	96	77.317	Hippocampus_comes
ENSGACG00000001464	vars2	99	70.629	ENSIPUG00000015573	Vars2	93	70.629	Ictalurus_punctatus
ENSGACG00000001464	vars2	99	52.535	ENSSTOG00000009924	VARS2	92	52.637	Ictidomys_tridecemlineatus
ENSGACG00000001464	vars2	99	53.084	ENSJJAG00000011144	Vars2	92	53.084	Jaculus_jaculus
ENSGACG00000001464	vars2	99	76.152	ENSKMAG00000001393	vars2	93	75.961	Kryptolebias_marmoratus
ENSGACG00000001464	vars2	98	76.239	ENSLBEG00000011949	vars2	92	76.239	Labrus_bergylta
ENSGACG00000001464	vars2	57	82.648	ENSLBEG00000005480	-	81	82.790	Labrus_bergylta
ENSGACG00000001464	vars2	99	51.984	ENSLACG00000001576	-	96	52.083	Latimeria_chalumnae
ENSGACG00000001464	vars2	99	53.854	ENSLAFG00000015183	VARS2	92	53.854	Loxodonta_africana
ENSGACG00000001464	vars2	99	53.043	ENSMFAG00000042367	VARS2	92	53.245	Macaca_fascicularis
ENSGACG00000001464	vars2	99	53.144	ENSMMUG00000018609	VARS2	92	53.347	Macaca_mulatta
ENSGACG00000001464	vars2	99	53.550	ENSMNEG00000043163	VARS2	92	53.753	Macaca_nemestrina
ENSGACG00000001464	vars2	99	53.550	ENSMLEG00000041728	VARS2	89	53.753	Mandrillus_leucophaeus
ENSGACG00000001464	vars2	99	78.140	ENSMAMG00000020339	vars2	93	78.373	Mastacembelus_armatus
ENSGACG00000001464	vars2	100	76.999	ENSMZEG00005017669	vars2	94	76.999	Maylandia_zebra
ENSGACG00000001464	vars2	99	53.753	ENSMAUG00000018946	Vars2	92	53.753	Mesocricetus_auratus
ENSGACG00000001464	vars2	83	59.046	ENSMICG00000005365	VARS2	92	59.046	Microcebus_murinus
ENSGACG00000001464	vars2	99	49.442	ENSMOCG00000014607	Vars2	92	49.442	Microtus_ochrogaster
ENSGACG00000001464	vars2	100	76.747	ENSMMOG00000012122	vars2	94	76.747	Mola_mola
ENSGACG00000001464	vars2	96	53.501	ENSMODG00000015848	VARS2	87	53.708	Monodelphis_domestica
ENSGACG00000001464	vars2	99	78.010	ENSMALG00000009217	vars2	99	78.010	Monopterus_albus
ENSGACG00000001464	vars2	99	54.112	MGP_CAROLIEiJ_G0021529	Vars2	97	56.560	Mus_caroli
ENSGACG00000001464	vars2	99	53.604	ENSMUSG00000038838	Vars2	96	56.506	Mus_musculus
ENSGACG00000001464	vars2	99	53.503	MGP_PahariEiJ_G0020523	Vars2	88	63.265	Mus_pahari
ENSGACG00000001464	vars2	99	53.706	MGP_SPRETEiJ_G0022436	Vars2	97	56.383	Mus_spretus
ENSGACG00000001464	vars2	99	54.297	ENSMPUG00000011643	VARS2	92	54.297	Mustela_putorius_furo
ENSGACG00000001464	vars2	96	54.250	ENSMLUG00000002356	VARS2	81	56.551	Myotis_lucifugus
ENSGACG00000001464	vars2	98	50.206	ENSNGAG00000020607	Vars2	90	50.206	Nannospalax_galili
ENSGACG00000001464	vars2	67	69.337	ENSNBRG00000001624	vars2	58	69.337	Neolamprologus_brichardi
ENSGACG00000001464	vars2	96	53.194	ENSNLEG00000005625	VARS2	86	53.674	Nomascus_leucogenys
ENSGACG00000001464	vars2	84	56.833	ENSMEUG00000014475	VARS2	89	56.833	Notamacropus_eugenii
ENSGACG00000001464	vars2	89	62.162	ENSOPRG00000000682	VARS2	82	62.162	Ochotona_princeps
ENSGACG00000001464	vars2	99	53.947	ENSODEG00000017965	VARS2	87	55.165	Octodon_degus
ENSGACG00000001464	vars2	99	55.902	ENSONIG00000004734	vars2	99	55.902	Oreochromis_niloticus
ENSGACG00000001464	vars2	80	58.824	ENSOANG00000000398	-	82	48.588	Ornithorhynchus_anatinus
ENSGACG00000001464	vars2	99	50.100	ENSOCUG00000021496	VARS2	56	51.739	Oryctolagus_cuniculus
ENSGACG00000001464	vars2	99	73.069	ENSORLG00000010632	vars2	93	73.142	Oryzias_latipes
ENSGACG00000001464	vars2	99	73.340	ENSORLG00020018584	vars2	93	73.340	Oryzias_latipes_hni
ENSGACG00000001464	vars2	99	73.043	ENSORLG00015010408	vars2	93	73.043	Oryzias_latipes_hsok
ENSGACG00000001464	vars2	99	73.366	ENSOMEG00000008360	vars2	93	73.439	Oryzias_melastigma
ENSGACG00000001464	vars2	99	53.543	ENSOGAG00000006087	VARS2	89	53.543	Otolemur_garnettii
ENSGACG00000001464	vars2	99	53.394	ENSOARG00000010844	VARS2	90	53.394	Ovis_aries
ENSGACG00000001464	vars2	99	53.347	ENSPPAG00000041141	VARS2	92	53.347	Pan_paniscus
ENSGACG00000001464	vars2	99	53.854	ENSPPRG00000006751	VARS2	85	55.165	Panthera_pardus
ENSGACG00000001464	vars2	99	53.753	ENSPTIG00000017799	VARS2	92	55.059	Panthera_tigris_altaica
ENSGACG00000001464	vars2	99	53.347	ENSPTRG00000034497	VARS2	92	53.347	Pan_troglodytes
ENSGACG00000001464	vars2	99	53.550	ENSPANG00000018481	VARS2	92	53.753	Papio_anubis
ENSGACG00000001464	vars2	100	67.832	ENSPKIG00000011372	vars2	93	67.832	Paramormyrops_kingsleyae
ENSGACG00000001464	vars2	64	63.050	ENSPSIG00000006206	VARS2	92	62.791	Pelodiscus_sinensis
ENSGACG00000001464	vars2	99	72.646	ENSPMGG00000000465	vars2	94	72.646	Periophthalmus_magnuspinnatus
ENSGACG00000001464	vars2	99	53.994	ENSPEMG00000014691	Vars2	92	53.994	Peromyscus_maniculatus_bairdii
ENSGACG00000001464	vars2	96	54.565	ENSPCIG00000015040	VARS2	88	54.846	Phascolarctos_cinereus
ENSGACG00000001464	vars2	99	75.074	ENSPFOG00000017616	vars2	93	75.074	Poecilia_formosa
ENSGACG00000001464	vars2	99	74.851	ENSPLAG00000019778	vars2	94	74.851	Poecilia_latipinna
ENSGACG00000001464	vars2	99	75.050	ENSPMEG00000011123	vars2	94	75.050	Poecilia_mexicana
ENSGACG00000001464	vars2	97	68.094	ENSPREG00000014998	vars2	93	68.094	Poecilia_reticulata
ENSGACG00000001464	vars2	99	53.245	ENSPPYG00000016424	VARS2	92	53.448	Pongo_abelii
ENSGACG00000001464	vars2	66	55.426	ENSPCAG00000006946	VARS2	61	55.426	Procavia_capensis
ENSGACG00000001464	vars2	99	52.218	ENSPCOG00000014839	VARS2	89	52.218	Propithecus_coquereli
ENSGACG00000001464	vars2	99	53.347	ENSPVAG00000004197	VARS2	92	53.347	Pteropus_vampyrus
ENSGACG00000001464	vars2	89	83.152	ENSPNYG00000010314	vars2	99	83.152	Pundamilia_nyererei
ENSGACG00000001464	vars2	99	71.003	ENSPNAG00000026793	vars2	93	71.003	Pygocentrus_nattereri
ENSGACG00000001464	vars2	99	53.401	ENSRNOG00000000833	Vars2	92	53.401	Rattus_norvegicus
ENSGACG00000001464	vars2	99	53.401	ENSRBIG00000032725	VARS2	92	53.604	Rhinopithecus_bieti
ENSGACG00000001464	vars2	99	53.245	ENSRROG00000043847	VARS2	92	53.448	Rhinopithecus_roxellana
ENSGACG00000001464	vars2	99	51.383	ENSSBOG00000033240	VARS2	90	51.581	Saimiri_boliviensis_boliviensis
ENSGACG00000001464	vars2	99	53.854	ENSSHAG00000009307	VARS2	86	55.844	Sarcophilus_harrisii
ENSGACG00000001464	vars2	100	69.254	ENSSFOG00015016187	vars2	93	69.254	Scleropages_formosus
ENSGACG00000001464	vars2	100	78.122	ENSSMAG00000020842	vars2	93	84.722	Scophthalmus_maximus
ENSGACG00000001464	vars2	100	80.910	ENSSDUG00000011598	vars2	94	80.910	Seriola_dumerili
ENSGACG00000001464	vars2	98	81.568	ENSSLDG00000015492	vars2	93	81.568	Seriola_lalandi_dorsalis
ENSGACG00000001464	vars2	53	61.481	ENSSARG00000003786	-	60	61.481	Sorex_araneus
ENSGACG00000001464	vars2	85	59.714	ENSSPUG00000014700	VARS2	87	59.714	Sphenodon_punctatus
ENSGACG00000001464	vars2	99	77.856	ENSSPAG00000004654	vars2	93	77.856	Stegastes_partitus
ENSGACG00000001464	vars2	99	54.462	ENSSSCG00000001384	VARS2	90	57.511	Sus_scrofa
ENSGACG00000001464	vars2	99	74.900	ENSTRUG00000005264	vars2	92	76.319	Takifugu_rubripes
ENSGACG00000001464	vars2	99	71.615	ENSTNIG00000005916	vars2	93	71.916	Tetraodon_nigroviridis
ENSGACG00000001464	vars2	92	59.459	ENSTTRG00000012243	VARS2	78	59.459	Tursiops_truncatus
ENSGACG00000001464	vars2	99	53.597	ENSUAMG00000026124	VARS2	99	54.615	Ursus_americanus
ENSGACG00000001464	vars2	99	53.854	ENSUMAG00000019894	VARS2	87	55.059	Ursus_maritimus
ENSGACG00000001464	vars2	99	54.260	ENSVVUG00000010754	VARS2	87	54.260	Vulpes_vulpes
ENSGACG00000001464	vars2	95	53.797	ENSXETG00000003036	vars2	98	53.919	Xenopus_tropicalis
ENSGACG00000001464	vars2	97	79.193	ENSXCOG00000003455	vars2	93	79.193	Xiphophorus_couchianus
ENSGACG00000001464	vars2	99	77.624	ENSXMAG00000013523	vars2	94	77.624	Xiphophorus_maculatus