EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001476 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2865 bases
Position: chrscaffold_27:4223803-4226667
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001911	TruB_N	PF01509.18	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001914	-	1391	-	ENSGACP00000001911	332 (aa)	-	G3N9C1

Gene Model

Click here to download ENSGACG00000001476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001476	trub2	58	33.163	ENSGACG00000015387	trub1	94	33.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001476	trub2	84	56.584	ENSG00000167112	TRUB2	84	56.584	Homo_sapiens
ENSGACG00000001476	trub2	97	63.692	ENSAPOG00000018284	-	91	80.000	Acanthochromis_polyacanthus
ENSGACG00000001476	trub2	70	80.687	ENSAPOG00000015733	trub2	84	80.687	Acanthochromis_polyacanthus
ENSGACG00000001476	trub2	53	70.455	ENSAPOG00000018216	-	85	70.455	Acanthochromis_polyacanthus
ENSGACG00000001476	trub2	86	56.338	ENSAMEG00000015395	TRUB2	85	56.338	Ailuropoda_melanoleuca
ENSGACG00000001476	trub2	98	76.543	ENSACIG00000016500	trub2	98	76.543	Amphilophus_citrinellus
ENSGACG00000001476	trub2	99	79.701	ENSAOCG00000002330	trub2	98	79.701	Amphiprion_ocellaris
ENSGACG00000001476	trub2	99	79.403	ENSAPEG00000013177	trub2	98	79.403	Amphiprion_percula
ENSGACG00000001476	trub2	93	76.206	ENSATEG00000011371	trub2	96	76.206	Anabas_testudineus
ENSGACG00000001476	trub2	83	50.362	ENSAPLG00000009254	TRUB2	89	50.725	Anas_platyrhynchos
ENSGACG00000001476	trub2	85	55.830	ENSACAG00000007331	TRUB2	85	55.830	Anolis_carolinensis
ENSGACG00000001476	trub2	84	57.295	ENSANAG00000036234	TRUB2	90	57.295	Aotus_nancymaae
ENSGACG00000001476	trub2	98	75.000	ENSACLG00000010793	trub2	98	75.000	Astatotilapia_calliptera
ENSGACG00000001476	trub2	90	62.876	ENSAMXG00000031679	trub2	85	62.876	Astyanax_mexicanus
ENSGACG00000001476	trub2	84	56.940	ENSCJAG00000020009	TRUB2	84	56.940	Callithrix_jacchus
ENSGACG00000001476	trub2	90	53.289	ENSCAFG00000020068	TRUB2	92	53.289	Canis_familiaris
ENSGACG00000001476	trub2	52	56.647	ENSCAFG00020017325	-	96	56.647	Canis_lupus_dingo
ENSGACG00000001476	trub2	84	55.556	ENSCHIG00000021160	TRUB2	84	55.556	Capra_hircus
ENSGACG00000001476	trub2	96	52.000	ENSTSYG00000034163	TRUB2	98	52.000	Carlito_syrichta
ENSGACG00000001476	trub2	83	51.246	ENSCAPG00000000223	TRUB2	94	51.246	Cavia_aperea
ENSGACG00000001476	trub2	95	51.402	ENSCPOG00000013535	TRUB2	95	51.402	Cavia_porcellus
ENSGACG00000001476	trub2	85	53.901	ENSCCAG00000028463	-	85	53.901	Cebus_capucinus
ENSGACG00000001476	trub2	84	56.584	ENSCCAG00000026531	-	85	56.584	Cebus_capucinus
ENSGACG00000001476	trub2	84	57.295	ENSCATG00000038234	TRUB2	84	57.295	Cercocebus_atys
ENSGACG00000001476	trub2	84	55.556	ENSCLAG00000001702	TRUB2	88	53.757	Chinchilla_lanigera
ENSGACG00000001476	trub2	84	54.035	ENSCSAG00000014117	TRUB2	84	54.035	Chlorocebus_sabaeus
ENSGACG00000001476	trub2	95	49.844	ENSCHOG00000001555	TRUB2	97	49.844	Choloepus_hoffmanni
ENSGACG00000001476	trub2	84	56.115	ENSCPBG00000025186	TRUB2	81	56.115	Chrysemys_picta_bellii
ENSGACG00000001476	trub2	86	31.959	ENSCSAVG00000003930	-	89	31.959	Ciona_savignyi
ENSGACG00000001476	trub2	84	50.890	ENSCANG00000016135	TRUB2	83	50.890	Colobus_angolensis_palliatus
ENSGACG00000001476	trub2	95	49.689	ENSCGRG00001024441	Trub2	97	49.689	Cricetulus_griseus_chok1gshd
ENSGACG00000001476	trub2	95	49.689	ENSCGRG00000005633	Trub2	97	49.689	Cricetulus_griseus_crigri
ENSGACG00000001476	trub2	97	65.421	ENSCSEG00000001331	trub2	96	65.421	Cynoglossus_semilaevis
ENSGACG00000001476	trub2	90	75.839	ENSCVAG00000009901	trub2	89	75.839	Cyprinodon_variegatus
ENSGACG00000001476	trub2	92	60.131	ENSDARG00000028379	trub2	87	60.131	Danio_rerio
ENSGACG00000001476	trub2	80	38.267	ENSDNOG00000043967	-	85	38.267	Dasypus_novemcinctus
ENSGACG00000001476	trub2	83	55.396	ENSDNOG00000045679	-	83	55.396	Dasypus_novemcinctus
ENSGACG00000001476	trub2	90	54.221	ENSDORG00000016222	Trub2	97	54.221	Dipodomys_ordii
ENSGACG00000001476	trub2	86	32.056	FBgn0033060	CG7849	90	32.056	Drosophila_melanogaster
ENSGACG00000001476	trub2	84	55.755	ENSETEG00000009114	TRUB2	86	55.755	Echinops_telfairi
ENSGACG00000001476	trub2	66	46.774	ENSEBUG00000015723	trub2	80	46.774	Eptatretus_burgeri
ENSGACG00000001476	trub2	84	56.989	ENSEASG00005016819	TRUB2	84	56.989	Equus_asinus_asinus
ENSGACG00000001476	trub2	84	57.348	ENSECAG00000023520	TRUB2	84	57.348	Equus_caballus
ENSGACG00000001476	trub2	84	55.556	ENSEEUG00000008908	TRUB2	84	55.556	Erinaceus_europaeus
ENSGACG00000001476	trub2	89	66.343	ENSELUG00000002376	trub2	96	66.343	Esox_lucius
ENSGACG00000001476	trub2	84	57.348	ENSFCAG00000005839	TRUB2	86	57.348	Felis_catus
ENSGACG00000001476	trub2	75	54.000	ENSFALG00000001364	TRUB2	80	54.941	Ficedula_albicollis
ENSGACG00000001476	trub2	84	56.272	ENSFDAG00000021374	TRUB2	88	54.335	Fukomys_damarensis
ENSGACG00000001476	trub2	97	62.848	ENSFHEG00000014655	trub2	96	62.848	Fundulus_heteroclitus
ENSGACG00000001476	trub2	90	61.745	ENSGMOG00000000981	trub2	100	61.745	Gadus_morhua
ENSGACG00000001476	trub2	83	54.015	ENSGALG00000004920	TRUB2	67	54.015	Gallus_gallus
ENSGACG00000001476	trub2	87	73.958	ENSGAFG00000010107	trub2	96	69.782	Gambusia_affinis
ENSGACG00000001476	trub2	86	54.225	ENSGAGG00000022872	TRUB2	84	54.225	Gopherus_agassizii
ENSGACG00000001476	trub2	84	56.228	ENSGGOG00000014780	TRUB2	84	56.228	Gorilla_gorilla
ENSGACG00000001476	trub2	98	75.617	ENSHBUG00000022384	trub2	98	75.617	Haplochromis_burtoni
ENSGACG00000001476	trub2	84	55.197	ENSHGLG00000016715	TRUB2	84	55.197	Heterocephalus_glaber_female
ENSGACG00000001476	trub2	84	55.197	ENSHGLG00100016548	TRUB2	84	55.197	Heterocephalus_glaber_male
ENSGACG00000001476	trub2	89	79.054	ENSHCOG00000017748	trub2	90	79.054	Hippocampus_comes
ENSGACG00000001476	trub2	90	60.197	ENSIPUG00000017725	hdhd3	53	60.197	Ictalurus_punctatus
ENSGACG00000001476	trub2	84	54.839	ENSSTOG00000008024	-	88	52.601	Ictidomys_tridecemlineatus
ENSGACG00000001476	trub2	84	54.839	ENSSTOG00000022617	-	84	54.839	Ictidomys_tridecemlineatus
ENSGACG00000001476	trub2	92	47.588	ENSJJAG00000019181	Trub2	93	47.588	Jaculus_jaculus
ENSGACG00000001476	trub2	97	73.375	ENSKMAG00000007861	trub2	97	73.375	Kryptolebias_marmoratus
ENSGACG00000001476	trub2	95	75.394	ENSLBEG00000000907	trub2	94	75.394	Labrus_bergylta
ENSGACG00000001476	trub2	87	55.903	ENSLACG00000001515	TRUB2	85	55.903	Latimeria_chalumnae
ENSGACG00000001476	trub2	89	61.409	ENSLOCG00000000885	trub2	98	61.409	Lepisosteus_oculatus
ENSGACG00000001476	trub2	84	55.914	ENSLAFG00000002174	TRUB2	91	55.914	Loxodonta_africana
ENSGACG00000001476	trub2	84	56.940	ENSMFAG00000000881	TRUB2	84	56.940	Macaca_fascicularis
ENSGACG00000001476	trub2	84	56.940	ENSMMUG00000014146	TRUB2	84	56.940	Macaca_mulatta
ENSGACG00000001476	trub2	84	56.940	ENSMNEG00000011189	TRUB2	84	56.940	Macaca_nemestrina
ENSGACG00000001476	trub2	84	56.940	ENSMLEG00000037270	TRUB2	84	56.940	Mandrillus_leucophaeus
ENSGACG00000001476	trub2	89	83.051	ENSMAMG00000023643	trub2	98	83.051	Mastacembelus_armatus
ENSGACG00000001476	trub2	98	75.309	ENSMZEG00005016018	trub2	98	75.309	Maylandia_zebra
ENSGACG00000001476	trub2	55	56.284	ENSMGAG00000003894	TRUB2	92	56.284	Meleagris_gallopavo
ENSGACG00000001476	trub2	91	52.273	ENSMAUG00000010403	Trub2	95	50.802	Mesocricetus_auratus
ENSGACG00000001476	trub2	95	51.863	ENSMICG00000047032	TRUB2	97	51.863	Microcebus_murinus
ENSGACG00000001476	trub2	88	52.685	ENSMOCG00000014291	Trub2	98	52.685	Microtus_ochrogaster
ENSGACG00000001476	trub2	97	76.012	ENSMMOG00000021674	trub2	99	76.012	Mola_mola
ENSGACG00000001476	trub2	85	53.737	ENSMODG00000005940	TRUB2	95	53.737	Monodelphis_domestica
ENSGACG00000001476	trub2	97	75.767	ENSMALG00000021231	trub2	97	75.767	Monopterus_albus
ENSGACG00000001476	trub2	84	53.381	MGP_CAROLIEiJ_G0023368	Trub2	96	48.677	Mus_caroli
ENSGACG00000001476	trub2	84	53.237	ENSMUSG00000039826	Trub2	95	49.198	Mus_musculus
ENSGACG00000001476	trub2	95	49.689	MGP_PahariEiJ_G0024826	Trub2	97	49.689	Mus_pahari
ENSGACG00000001476	trub2	84	53.237	MGP_SPRETEiJ_G0024286	Trub2	95	48.387	Mus_spretus
ENSGACG00000001476	trub2	86	53.873	ENSMPUG00000013206	TRUB2	78	53.873	Mustela_putorius_furo
ENSGACG00000001476	trub2	84	56.631	ENSMLUG00000005256	TRUB2	83	56.631	Myotis_lucifugus
ENSGACG00000001476	trub2	95	49.689	ENSNGAG00000018679	Trub2	97	49.689	Nannospalax_galili
ENSGACG00000001476	trub2	98	75.309	ENSNBRG00000016294	trub2	98	75.309	Neolamprologus_brichardi
ENSGACG00000001476	trub2	84	56.584	ENSNLEG00000017556	TRUB2	84	56.584	Nomascus_leucogenys
ENSGACG00000001476	trub2	84	54.317	ENSMEUG00000000484	TRUB2	89	54.317	Notamacropus_eugenii
ENSGACG00000001476	trub2	94	49.221	ENSOPRG00000001981	TRUB2	97	49.221	Ochotona_princeps
ENSGACG00000001476	trub2	84	55.755	ENSODEG00000017292	TRUB2	85	55.755	Octodon_degus
ENSGACG00000001476	trub2	98	75.617	ENSONIG00000004230	trub2	98	75.617	Oreochromis_niloticus
ENSGACG00000001476	trub2	57	54.255	ENSOANG00000029023	-	83	54.255	Ornithorhynchus_anatinus
ENSGACG00000001476	trub2	90	53.618	ENSOCUG00000026296	TRUB2	83	53.618	Oryctolagus_cuniculus
ENSGACG00000001476	trub2	93	72.903	ENSORLG00000020011	trub2	91	72.903	Oryzias_latipes
ENSGACG00000001476	trub2	90	74.832	ENSORLG00020011028	trub2	86	74.832	Oryzias_latipes_hni
ENSGACG00000001476	trub2	90	74.832	ENSORLG00015007494	trub2	90	74.832	Oryzias_latipes_hsok
ENSGACG00000001476	trub2	100	70.181	ENSOMEG00000006702	trub2	99	70.181	Oryzias_melastigma
ENSGACG00000001476	trub2	59	56.923	ENSOARG00000003785	-	81	54.634	Ovis_aries
ENSGACG00000001476	trub2	86	55.439	ENSOARG00000010579	-	85	55.439	Ovis_aries
ENSGACG00000001476	trub2	84	56.940	ENSPPAG00000043146	TRUB2	84	56.940	Pan_paniscus
ENSGACG00000001476	trub2	84	57.348	ENSPPRG00000006307	TRUB2	86	57.348	Panthera_pardus
ENSGACG00000001476	trub2	84	57.706	ENSPTIG00000012366	TRUB2	86	57.706	Panthera_tigris_altaica
ENSGACG00000001476	trub2	84	56.584	ENSPTRG00000021423	TRUB2	84	56.584	Pan_troglodytes
ENSGACG00000001476	trub2	84	56.584	ENSPTRG00000052151	-	84	56.584	Pan_troglodytes
ENSGACG00000001476	trub2	84	56.940	ENSPANG00000025856	TRUB2	84	56.940	Papio_anubis
ENSGACG00000001476	trub2	89	67.003	ENSPKIG00000019769	trub2	97	67.003	Paramormyrops_kingsleyae
ENSGACG00000001476	trub2	83	53.791	ENSPSIG00000015701	TRUB2	92	53.791	Pelodiscus_sinensis
ENSGACG00000001476	trub2	88	74.744	ENSPMGG00000010206	trub2	92	74.744	Periophthalmus_magnuspinnatus
ENSGACG00000001476	trub2	94	50.156	ENSPEMG00000017893	Trub2	96	50.156	Peromyscus_maniculatus_bairdii
ENSGACG00000001476	trub2	84	55.036	ENSPCIG00000026731	TRUB2	89	55.036	Phascolarctos_cinereus
ENSGACG00000001476	trub2	84	75.357	ENSPFOG00000018018	trub2	83	69.906	Poecilia_formosa
ENSGACG00000001476	trub2	84	75.000	ENSPLAG00000010484	trub2	90	69.592	Poecilia_latipinna
ENSGACG00000001476	trub2	100	68.468	ENSPMEG00000012913	trub2	99	68.468	Poecilia_mexicana
ENSGACG00000001476	trub2	87	73.611	ENSPREG00000002549	trub2	96	68.389	Poecilia_reticulata
ENSGACG00000001476	trub2	84	55.872	ENSPPYG00000019650	TRUB2	86	55.872	Pongo_abelii
ENSGACG00000001476	trub2	84	55.914	ENSPCAG00000015068	TRUB2	85	55.914	Procavia_capensis
ENSGACG00000001476	trub2	95	52.174	ENSPCOG00000017100	TRUB2	97	52.174	Propithecus_coquereli
ENSGACG00000001476	trub2	78	56.322	ENSPVAG00000001224	TRUB2	87	56.322	Pteropus_vampyrus
ENSGACG00000001476	trub2	98	75.617	ENSPNYG00000013666	trub2	98	75.617	Pundamilia_nyererei
ENSGACG00000001476	trub2	96	59.385	ENSPNAG00000017292	trub2	93	59.385	Pygocentrus_nattereri
ENSGACG00000001476	trub2	84	53.763	ENSRNOG00000043189	Trub2	86	53.763	Rattus_norvegicus
ENSGACG00000001476	trub2	84	51.246	ENSRBIG00000006965	TRUB2	83	51.246	Rhinopithecus_bieti
ENSGACG00000001476	trub2	84	56.584	ENSRROG00000042928	TRUB2	84	56.584	Rhinopithecus_roxellana
ENSGACG00000001476	trub2	84	55.914	ENSSBOG00000022439	TRUB2	84	55.914	Saimiri_boliviensis_boliviensis
ENSGACG00000001476	trub2	86	65.505	ENSSFOG00015013391	trub2	92	65.505	Scleropages_formosus
ENSGACG00000001476	trub2	90	80.872	ENSSMAG00000020820	trub2	91	80.872	Scophthalmus_maximus
ENSGACG00000001476	trub2	97	79.876	ENSSDUG00000016928	trub2	96	79.876	Seriola_dumerili
ENSGACG00000001476	trub2	97	78.947	ENSSLDG00000024701	trub2	96	78.947	Seriola_lalandi_dorsalis
ENSGACG00000001476	trub2	86	53.333	ENSSPUG00000015515	TRUB2	85	53.333	Sphenodon_punctatus
ENSGACG00000001476	trub2	92	81.579	ENSSPAG00000017865	trub2	92	81.579	Stegastes_partitus
ENSGACG00000001476	trub2	84	56.631	ENSSSCG00000005645	TRUB2	84	56.400	Sus_scrofa
ENSGACG00000001476	trub2	75	55.378	ENSTGUG00000003704	TRUB2	94	55.378	Taeniopygia_guttata
ENSGACG00000001476	trub2	90	74.497	ENSTRUG00000015499	trub2	91	74.497	Takifugu_rubripes
ENSGACG00000001476	trub2	88	76.370	ENSTNIG00000014721	trub2	100	76.370	Tetraodon_nigroviridis
ENSGACG00000001476	trub2	65	47.511	ENSTBEG00000000586	TRUB2	98	47.511	Tupaia_belangeri
ENSGACG00000001476	trub2	84	53.237	ENSTTRG00000016486	TRUB2	84	53.237	Tursiops_truncatus
ENSGACG00000001476	trub2	86	55.282	ENSUAMG00000020276	TRUB2	83	55.282	Ursus_americanus
ENSGACG00000001476	trub2	86	55.634	ENSUMAG00000022051	TRUB2	83	55.634	Ursus_maritimus
ENSGACG00000001476	trub2	86	42.105	ENSVPAG00000005793	TRUB2	89	42.105	Vicugna_pacos
ENSGACG00000001476	trub2	84	56.272	ENSVVUG00000013451	TRUB2	79	56.272	Vulpes_vulpes
ENSGACG00000001476	trub2	87	53.952	ENSXETG00000003973	trub2	89	53.952	Xenopus_tropicalis
ENSGACG00000001476	trub2	87	74.483	ENSXCOG00000008759	trub2	98	68.997	Xiphophorus_couchianus
ENSGACG00000001476	trub2	87	74.138	ENSXMAG00000015478	trub2	98	68.693	Xiphophorus_maculatus