EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000001523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2080 bases
Position: chrscaffold_120:55410-57489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	1	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	2	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	3	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	4	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	5	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	6	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	7	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	8	9
ENSGACP00000001980	zf-C2H2	PF00096.26	6.1e-51	9	9
ENSGACP00000001980	zf-met	PF12874.7	9.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000001983	-	1275	-	ENSGACP00000001980	425 (aa)	-	G3N9J0

Gene Model

Click here to download ENSGACG00000001523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000001523	-	99	39.298	ENSGACG00000018088	si:dkey-7i4.5	99	39.298
ENSGACG00000001523	-	99	45.070	ENSGACG00000006283	-	90	45.070
ENSGACG00000001523	-	99	37.410	ENSGACG00000005553	znf236	99	35.198
ENSGACG00000001523	-	97	31.492	ENSGACG00000006824	znf131	51	31.868
ENSGACG00000001523	-	99	43.041	ENSGACG00000004765	-	100	43.041
ENSGACG00000001523	-	99	40.330	ENSGACG00000014395	-	100	40.330
ENSGACG00000001523	-	98	33.962	ENSGACG00000002626	si:ch211-216l23.1	76	32.174
ENSGACG00000001523	-	99	33.333	ENSGACG00000009449	znf526	95	33.333
ENSGACG00000001523	-	94	46.429	ENSGACG00000011124	sall4	55	46.809
ENSGACG00000001523	-	99	39.905	ENSGACG00000012517	-	100	39.036
ENSGACG00000001523	-	97	39.362	ENSGACG00000018415	-	99	39.362
ENSGACG00000001523	-	99	37.659	ENSGACG00000001371	-	100	38.790
ENSGACG00000001523	-	99	42.336	ENSGACG00000010051	-	99	42.336
ENSGACG00000001523	-	99	38.710	ENSGACG00000003372	zbtb47b	61	38.710
ENSGACG00000001523	-	99	45.274	ENSGACG00000004549	-	100	43.537
ENSGACG00000001523	-	99	43.850	ENSGACG00000012415	GZF1	100	43.085
ENSGACG00000001523	-	99	36.264	ENSGACG00000001377	-	93	35.369
ENSGACG00000001523	-	99	35.982	ENSGACG00000010393	-	100	35.821
ENSGACG00000001523	-	89	41.667	ENSGACG00000001618	-	87	41.176
ENSGACG00000001523	-	99	41.546	ENSGACG00000016248	-	100	41.546
ENSGACG00000001523	-	97	32.927	ENSGACG00000014840	maza	88	32.927
ENSGACG00000001523	-	99	40.909	ENSGACG00000011808	e4f1	73	36.994
ENSGACG00000001523	-	98	35.976	ENSGACG00000008733	znf646	81	35.976
ENSGACG00000001523	-	99	35.323	ENSGACG00000015729	-	97	35.323
ENSGACG00000001523	-	99	32.791	ENSGACG00000003258	znf319b	85	32.791
ENSGACG00000001523	-	99	43.125	ENSGACG00000019550	-	100	42.991
ENSGACG00000001523	-	97	42.308	ENSGACG00000010147	snai1a	95	41.905
ENSGACG00000001523	-	98	32.714	ENSGACG00000001166	-	100	32.714
ENSGACG00000001523	-	97	32.075	ENSGACG00000014714	si:dkey-89b17.4	99	32.950
ENSGACG00000001523	-	99	42.722	ENSGACG00000004761	-	100	41.000
ENSGACG00000001523	-	99	35.988	ENSGACG00000010515	ZNF628	99	35.988
ENSGACG00000001523	-	99	37.811	ENSGACG00000018816	-	100	37.811
ENSGACG00000001523	-	97	37.584	ENSGACG00000008982	scrt1b	57	37.584
ENSGACG00000001523	-	100	37.349	ENSGACG00000012611	-	88	36.218
ENSGACG00000001523	-	96	43.478	ENSGACG00000018134	gfi1b	66	43.478
ENSGACG00000001523	-	99	38.945	ENSGACG00000010384	-	99	38.945
ENSGACG00000001523	-	96	37.681	ENSGACG00000017935	snai2	58	37.681
ENSGACG00000001523	-	99	45.413	ENSGACG00000005239	-	90	44.056
ENSGACG00000001523	-	97	36.774	ENSGACG00000004072	-	53	36.774
ENSGACG00000001523	-	96	40.964	ENSGACG00000015674	gfi1aa	53	40.964
ENSGACG00000001523	-	99	38.208	ENSGACG00000005742	-	61	38.462
ENSGACG00000001523	-	67	43.421	ENSGACG00000018794	ovol1a	64	44.595
ENSGACG00000001523	-	99	40.662	ENSGACG00000004478	-	100	40.662
ENSGACG00000001523	-	99	36.842	ENSGACG00000019863	-	99	36.842
ENSGACG00000001523	-	99	39.764	ENSGACG00000013659	-	98	39.764
ENSGACG00000001523	-	99	42.759	ENSGACG00000013652	-	100	42.759
ENSGACG00000001523	-	99	43.083	ENSGACG00000010352	si:ch211-207i20.2	62	43.083
ENSGACG00000001523	-	99	42.250	ENSGACG00000013660	-	100	42.250
ENSGACG00000001523	-	99	35.691	ENSGACG00000011187	zbtb48	54	35.691
ENSGACG00000001523	-	99	43.891	ENSGACG00000001358	-	100	43.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001523	-	99	42.654	ENSACAG00000026916	-	79	41.425	Anolis_carolinensis
ENSGACG00000001523	-	99	45.210	ENSACAG00000026906	-	99	45.210	Anolis_carolinensis
ENSGACG00000001523	-	99	46.154	ENSACAG00000027001	-	99	46.154	Anolis_carolinensis
ENSGACG00000001523	-	97	51.220	ENSAMXG00000038122	-	94	51.220	Astyanax_mexicanus
ENSGACG00000001523	-	99	40.865	ENSAMXG00000014745	-	83	40.865	Astyanax_mexicanus
ENSGACG00000001523	-	99	43.023	ENSELUG00000021525	-	72	43.023	Esox_lucius
ENSGACG00000001523	-	99	38.462	ENSELUG00000018970	-	84	38.462	Esox_lucius
ENSGACG00000001523	-	99	41.860	ENSELUG00000000485	-	90	41.860	Esox_lucius
ENSGACG00000001523	-	99	37.984	ENSELUG00000013806	-	65	37.991	Esox_lucius
ENSGACG00000001523	-	99	35.294	ENSELUG00000011838	-	66	35.294	Esox_lucius
ENSGACG00000001523	-	96	38.390	ENSHBUG00000016384	-	84	38.390	Haplochromis_burtoni
ENSGACG00000001523	-	99	43.191	ENSHCOG00000001629	-	63	43.191	Hippocampus_comes
ENSGACG00000001523	-	99	42.917	ENSHCOG00000017456	-	99	42.917	Hippocampus_comes
ENSGACG00000001523	-	99	36.000	ENSLBEG00000013235	-	82	36.000	Labrus_bergylta
ENSGACG00000001523	-	99	42.537	ENSPNAG00000009176	-	98	42.537	Pygocentrus_nattereri
ENSGACG00000001523	-	99	40.885	ENSPNAG00000009184	-	83	40.885	Pygocentrus_nattereri
ENSGACG00000001523	-	99	42.045	ENSSFOG00015020993	-	78	42.045	Scleropages_formosus
ENSGACG00000001523	-	99	37.349	ENSTNIG00000000528	-	99	37.349	Tetraodon_nigroviridis
ENSGACG00000001523	-	99	71.838	ENSTNIG00000002343	-	81	71.838	Tetraodon_nigroviridis
ENSGACG00000001523	-	99	40.000	ENSXMAG00000020042	-	66	40.000	Xiphophorus_maculatus