EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000001542 (Gene tree)
Gene ID: -
Gene Symbol: si:rp71-84d19.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6476 bases
Position: chrgroupXVI:1390445-1396920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002014	MMR_HSR1	PF01926.23	1.9e-17	1	1
ENSGACP00000002012	MMR_HSR1	PF01926.23	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002015	-	966	-	ENSGACP00000002012	281 (aa)	-	G3N9M1
ENSGACT00000002017	-	735	-	ENSGACP00000002014	245 (aa)	-	G3N9M3

Gene Model

Click here to download ENSGACG00000001542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001542	si:rp71-84d19.3	99	59.592	ENSG00000163607	GTPBP8	99	69.591	Homo_sapiens
ENSGACG00000001542	si:rp71-84d19.3	100	85.714	ENSAPOG00000019884	si:rp71-84d19.3	98	81.851	Acanthochromis_polyacanthus
ENSGACG00000001542	si:rp71-84d19.3	100	58.130	ENSAMEG00000018089	GTPBP8	85	58.943	Ailuropoda_melanoleuca
ENSGACG00000001542	si:rp71-84d19.3	67	89.697	ENSACIG00000018682	si:rp71-84d19.3	95	89.697	Amphilophus_citrinellus
ENSGACG00000001542	si:rp71-84d19.3	100	86.122	ENSAOCG00000022531	si:rp71-84d19.3	98	81.851	Amphiprion_ocellaris
ENSGACG00000001542	si:rp71-84d19.3	100	86.122	ENSAPEG00000023238	si:rp71-84d19.3	98	81.851	Amphiprion_percula
ENSGACG00000001542	si:rp71-84d19.3	100	87.755	ENSATEG00000005805	si:rp71-84d19.3	95	87.209	Anabas_testudineus
ENSGACG00000001542	si:rp71-84d19.3	73	65.169	ENSAPLG00000009443	GTPBP8	97	65.169	Anas_platyrhynchos
ENSGACG00000001542	si:rp71-84d19.3	89	59.633	ENSACAG00000010189	GTPBP8	81	57.642	Anolis_carolinensis
ENSGACG00000001542	si:rp71-84d19.3	99	60.324	ENSANAG00000024048	GTPBP8	97	68.421	Aotus_nancymaae
ENSGACG00000001542	si:rp71-84d19.3	100	86.122	ENSACLG00000022779	si:rp71-84d19.3	98	78.292	Astatotilapia_calliptera
ENSGACG00000001542	si:rp71-84d19.3	99	68.313	ENSAMXG00000014566	si:rp71-84d19.3	95	62.909	Astyanax_mexicanus
ENSGACG00000001542	si:rp71-84d19.3	100	59.756	ENSBTAG00000006534	GTPBP8	85	59.756	Bos_taurus
ENSGACG00000001542	si:rp71-84d19.3	99	60.976	ENSCJAG00000020325	GTPBP8	80	61.224	Callithrix_jacchus
ENSGACG00000001542	si:rp71-84d19.3	100	58.704	ENSCAFG00000010557	GTPBP8	85	58.943	Canis_familiaris
ENSGACG00000001542	si:rp71-84d19.3	100	58.704	ENSCAFG00020007293	GTPBP8	85	58.943	Canis_lupus_dingo
ENSGACG00000001542	si:rp71-84d19.3	100	59.350	ENSCHIG00000024798	GTPBP8	85	59.350	Capra_hircus
ENSGACG00000001542	si:rp71-84d19.3	99	60.569	ENSTSYG00000008331	GTPBP8	89	58.730	Carlito_syrichta
ENSGACG00000001542	si:rp71-84d19.3	68	64.671	ENSCAPG00000005604	GTPBP8	97	64.671	Cavia_aperea
ENSGACG00000001542	si:rp71-84d19.3	99	57.551	ENSCPOG00000004462	GTPBP8	87	57.143	Cavia_porcellus
ENSGACG00000001542	si:rp71-84d19.3	99	60.976	ENSCCAG00000016215	GTPBP8	99	69.006	Cebus_capucinus
ENSGACG00000001542	si:rp71-84d19.3	99	60.000	ENSCATG00000026978	GTPBP8	99	69.591	Cercocebus_atys
ENSGACG00000001542	si:rp71-84d19.3	99	56.735	ENSCLAG00000008280	GTPBP8	87	55.952	Chinchilla_lanigera
ENSGACG00000001542	si:rp71-84d19.3	99	60.976	ENSCSAG00000006667	GTPBP8	91	60.976	Chlorocebus_sabaeus
ENSGACG00000001542	si:rp71-84d19.3	68	61.078	ENSCHOG00000009519	-	97	61.078	Choloepus_hoffmanni
ENSGACG00000001542	si:rp71-84d19.3	99	61.885	ENSCPBG00000003342	GTPBP8	91	59.160	Chrysemys_picta_bellii
ENSGACG00000001542	si:rp71-84d19.3	99	60.976	ENSCANG00000015621	GTPBP8	99	69.591	Colobus_angolensis_palliatus
ENSGACG00000001542	si:rp71-84d19.3	100	57.895	ENSCGRG00001025024	Gtpbp8	95	53.846	Cricetulus_griseus_chok1gshd
ENSGACG00000001542	si:rp71-84d19.3	100	57.895	ENSCGRG00000005605	Gtpbp8	97	53.846	Cricetulus_griseus_crigri
ENSGACG00000001542	si:rp71-84d19.3	97	68.679	ENSCSEG00000015488	si:rp71-84d19.3	97	68.679	Cynoglossus_semilaevis
ENSGACG00000001542	si:rp71-84d19.3	100	82.041	ENSCVAG00000008610	si:rp71-84d19.3	91	83.140	Cyprinodon_variegatus
ENSGACG00000001542	si:rp71-84d19.3	99	67.355	ENSDARG00000075033	GTPBP8	93	62.044	Danio_rerio
ENSGACG00000001542	si:rp71-84d19.3	100	57.895	ENSDNOG00000002387	GTPBP8	86	57.895	Dasypus_novemcinctus
ENSGACG00000001542	si:rp71-84d19.3	72	64.972	ENSDORG00000008910	Gtpbp8	82	64.972	Dipodomys_ordii
ENSGACG00000001542	si:rp71-84d19.3	89	46.862	ENSETEG00000016754	GTPBP8	85	46.862	Echinops_telfairi
ENSGACG00000001542	si:rp71-84d19.3	99	49.012	ENSEBUG00000004225	si:rp71-84d19.3	89	47.876	Eptatretus_burgeri
ENSGACG00000001542	si:rp71-84d19.3	100	60.569	ENSEASG00005011438	GTPBP8	85	60.569	Equus_asinus_asinus
ENSGACG00000001542	si:rp71-84d19.3	100	60.569	ENSECAG00000012554	GTPBP8	85	60.569	Equus_caballus
ENSGACG00000001542	si:rp71-84d19.3	100	48.638	ENSEEUG00000011408	GTPBP8	87	49.027	Erinaceus_europaeus
ENSGACG00000001542	si:rp71-84d19.3	100	73.061	ENSELUG00000014421	si:rp71-84d19.3	99	68.327	Esox_lucius
ENSGACG00000001542	si:rp71-84d19.3	99	58.943	ENSFCAG00000009098	GTPBP8	86	59.184	Felis_catus
ENSGACG00000001542	si:rp71-84d19.3	97	62.025	ENSFALG00000005871	GTPBP8	94	59.055	Ficedula_albicollis
ENSGACG00000001542	si:rp71-84d19.3	94	59.227	ENSFDAG00000016990	GTPBP8	94	59.227	Fukomys_damarensis
ENSGACG00000001542	si:rp71-84d19.3	100	83.265	ENSFHEG00000007231	si:rp71-84d19.3	99	77.132	Fundulus_heteroclitus
ENSGACG00000001542	si:rp71-84d19.3	99	75.918	ENSGMOG00000004456	si:rp71-84d19.3	99	71.786	Gadus_morhua
ENSGACG00000001542	si:rp71-84d19.3	98	59.336	ENSGALG00000015190	GTPBP8	79	57.874	Gallus_gallus
ENSGACG00000001542	si:rp71-84d19.3	100	84.490	ENSGAFG00000009736	si:rp71-84d19.3	95	84.302	Gambusia_affinis
ENSGACG00000001542	si:rp71-84d19.3	99	61.885	ENSGAGG00000024287	GTPBP8	97	68.421	Gopherus_agassizii
ENSGACG00000001542	si:rp71-84d19.3	99	59.350	ENSGGOG00000009259	GTPBP8	99	69.006	Gorilla_gorilla
ENSGACG00000001542	si:rp71-84d19.3	73	63.333	ENSHGLG00000018819	GTPBP8	83	63.333	Heterocephalus_glaber_female
ENSGACG00000001542	si:rp71-84d19.3	70	65.698	ENSHGLG00100005474	GTPBP8	80	65.698	Heterocephalus_glaber_male
ENSGACG00000001542	si:rp71-84d19.3	99	79.098	ENSHCOG00000008055	si:rp71-84d19.3	97	72.857	Hippocampus_comes
ENSGACG00000001542	si:rp71-84d19.3	100	66.939	ENSIPUG00000023808	gtpbp8	98	62.590	Ictalurus_punctatus
ENSGACG00000001542	si:rp71-84d19.3	99	60.163	ENSSTOG00000002134	GTPBP8	86	60.163	Ictidomys_tridecemlineatus
ENSGACG00000001542	si:rp71-84d19.3	100	58.300	ENSJJAG00000011072	Gtpbp8	89	58.300	Jaculus_jaculus
ENSGACG00000001542	si:rp71-84d19.3	100	84.898	ENSKMAG00000020114	si:rp71-84d19.3	95	77.936	Kryptolebias_marmoratus
ENSGACG00000001542	si:rp71-84d19.3	100	84.898	ENSLBEG00000026954	si:rp71-84d19.3	98	80.071	Labrus_bergylta
ENSGACG00000001542	si:rp71-84d19.3	100	65.992	ENSLACG00000007981	GTPBP8	98	64.093	Latimeria_chalumnae
ENSGACG00000001542	si:rp71-84d19.3	99	67.623	ENSLOCG00000008641	si:rp71-84d19.3	84	61.871	Lepisosteus_oculatus
ENSGACG00000001542	si:rp71-84d19.3	100	58.704	ENSLAFG00000009408	GTPBP8	89	59.109	Loxodonta_africana
ENSGACG00000001542	si:rp71-84d19.3	99	60.569	ENSMFAG00000045745	GTPBP8	99	69.591	Macaca_fascicularis
ENSGACG00000001542	si:rp71-84d19.3	99	60.569	ENSMMUG00000014874	GTPBP8	99	69.591	Macaca_mulatta
ENSGACG00000001542	si:rp71-84d19.3	99	60.163	ENSMNEG00000033476	GTPBP8	99	69.591	Macaca_nemestrina
ENSGACG00000001542	si:rp71-84d19.3	99	60.000	ENSMLEG00000036123	GTPBP8	99	69.591	Mandrillus_leucophaeus
ENSGACG00000001542	si:rp71-84d19.3	100	87.347	ENSMAMG00000008709	si:rp71-84d19.3	94	82.482	Mastacembelus_armatus
ENSGACG00000001542	si:rp71-84d19.3	100	86.531	ENSMZEG00005012995	si:rp71-84d19.3	98	78.648	Maylandia_zebra
ENSGACG00000001542	si:rp71-84d19.3	70	68.023	ENSMGAG00000014337	GTPBP8	97	68.023	Meleagris_gallopavo
ENSGACG00000001542	si:rp71-84d19.3	100	58.300	ENSMAUG00000000058	Gtpbp8	92	55.894	Mesocricetus_auratus
ENSGACG00000001542	si:rp71-84d19.3	99	59.756	ENSMICG00000048925	GTPBP8	99	68.421	Microcebus_murinus
ENSGACG00000001542	si:rp71-84d19.3	100	57.490	ENSMOCG00000016965	Gtpbp8	87	57.490	Microtus_ochrogaster
ENSGACG00000001542	si:rp71-84d19.3	68	84.940	ENSMMOG00000019197	si:rp71-84d19.3	93	84.940	Mola_mola
ENSGACG00000001542	si:rp71-84d19.3	100	59.756	ENSMODG00000018130	GTPBP8	90	58.268	Monodelphis_domestica
ENSGACG00000001542	si:rp71-84d19.3	99	86.885	ENSMALG00000009362	si:rp71-84d19.3	97	81.071	Monopterus_albus
ENSGACG00000001542	si:rp71-84d19.3	100	57.490	MGP_CAROLIEiJ_G0020770	Gtpbp8	83	62.983	Mus_caroli
ENSGACG00000001542	si:rp71-84d19.3	100	57.085	ENSMUSG00000022668	Gtpbp8	97	52.330	Mus_musculus
ENSGACG00000001542	si:rp71-84d19.3	100	57.085	MGP_PahariEiJ_G0016470	Gtpbp8	100	51.579	Mus_pahari
ENSGACG00000001542	si:rp71-84d19.3	100	56.680	MGP_SPRETEiJ_G0021669	Gtpbp8	87	56.680	Mus_spretus
ENSGACG00000001542	si:rp71-84d19.3	100	57.895	ENSMPUG00000000305	GTPBP8	83	58.130	Mustela_putorius_furo
ENSGACG00000001542	si:rp71-84d19.3	100	59.919	ENSMLUG00000017729	GTPBP8	86	59.919	Myotis_lucifugus
ENSGACG00000001542	si:rp71-84d19.3	100	59.756	ENSNGAG00000017687	Gtpbp8	99	54.643	Nannospalax_galili
ENSGACG00000001542	si:rp71-84d19.3	99	59.592	ENSNLEG00000004407	GTPBP8	99	69.006	Nomascus_leucogenys
ENSGACG00000001542	si:rp71-84d19.3	99	50.189	ENSMEUG00000005021	GTPBP8	91	50.189	Notamacropus_eugenii
ENSGACG00000001542	si:rp71-84d19.3	99	49.430	ENSOPRG00000008882	GTPBP8	94	46.831	Ochotona_princeps
ENSGACG00000001542	si:rp71-84d19.3	67	63.636	ENSODEG00000005162	GTPBP8	95	63.636	Octodon_degus
ENSGACG00000001542	si:rp71-84d19.3	100	87.347	ENSONIG00000004479	si:rp71-84d19.3	97	87.347	Oreochromis_niloticus
ENSGACG00000001542	si:rp71-84d19.3	86	62.085	ENSOANG00000003960	GTPBP8	99	62.085	Ornithorhynchus_anatinus
ENSGACG00000001542	si:rp71-84d19.3	99	57.895	ENSOCUG00000010793	GTPBP8	85	57.895	Oryctolagus_cuniculus
ENSGACG00000001542	si:rp71-84d19.3	100	71.837	ENSOMEG00000017933	si:rp71-84d19.3	98	66.192	Oryzias_melastigma
ENSGACG00000001542	si:rp71-84d19.3	100	58.468	ENSOGAG00000002997	GTPBP8	99	54.225	Otolemur_garnettii
ENSGACG00000001542	si:rp71-84d19.3	100	58.300	ENSOARG00000019364	GTPBP8	85	58.300	Ovis_aries
ENSGACG00000001542	si:rp71-84d19.3	99	59.756	ENSPPAG00000033092	GTPBP8	99	68.421	Pan_paniscus
ENSGACG00000001542	si:rp71-84d19.3	99	59.350	ENSPPRG00000021797	GTPBP8	86	59.592	Panthera_pardus
ENSGACG00000001542	si:rp71-84d19.3	99	59.350	ENSPTIG00000019930	GTPBP8	86	59.592	Panthera_tigris_altaica
ENSGACG00000001542	si:rp71-84d19.3	99	59.756	ENSPTRG00000015224	GTPBP8	99	68.421	Pan_troglodytes
ENSGACG00000001542	si:rp71-84d19.3	99	60.569	ENSPANG00000007139	GTPBP8	99	69.591	Papio_anubis
ENSGACG00000001542	si:rp71-84d19.3	99	64.754	ENSPKIG00000013526	si:rp71-84d19.3	96	61.348	Paramormyrops_kingsleyae
ENSGACG00000001542	si:rp71-84d19.3	99	62.140	ENSPSIG00000002264	GTPBP8	91	59.316	Pelodiscus_sinensis
ENSGACG00000001542	si:rp71-84d19.3	91	78.378	ENSPMGG00000012449	si:rp71-84d19.3	99	71.705	Periophthalmus_magnuspinnatus
ENSGACG00000001542	si:rp71-84d19.3	100	59.109	ENSPEMG00000014655	Gtpbp8	89	57.874	Peromyscus_maniculatus_bairdii
ENSGACG00000001542	si:rp71-84d19.3	99	60.816	ENSPCIG00000019601	GTPBP8	89	59.684	Phascolarctos_cinereus
ENSGACG00000001542	si:rp71-84d19.3	99	84.426	ENSPFOG00000016865	si:rp71-84d19.3	95	78.339	Poecilia_formosa
ENSGACG00000001542	si:rp71-84d19.3	99	84.426	ENSPLAG00000008977	si:rp71-84d19.3	96	78.339	Poecilia_latipinna
ENSGACG00000001542	si:rp71-84d19.3	99	84.016	ENSPMEG00000021981	si:rp71-84d19.3	96	77.978	Poecilia_mexicana
ENSGACG00000001542	si:rp71-84d19.3	99	81.967	ENSPREG00000019094	si:rp71-84d19.3	94	81.287	Poecilia_reticulata
ENSGACG00000001542	si:rp71-84d19.3	99	59.756	ENSPPYG00000013543	GTPBP8	86	60.000	Pongo_abelii
ENSGACG00000001542	si:rp71-84d19.3	99	51.527	ENSPCAG00000004162	GTPBP8	88	51.724	Procavia_capensis
ENSGACG00000001542	si:rp71-84d19.3	99	51.341	ENSPVAG00000015965	GTPBP8	87	51.341	Pteropus_vampyrus
ENSGACG00000001542	si:rp71-84d19.3	100	86.122	ENSPNYG00000016946	si:rp71-84d19.3	98	77.580	Pundamilia_nyererei
ENSGACG00000001542	si:rp71-84d19.3	100	65.714	ENSPNAG00000024943	si:rp71-84d19.3	93	63.636	Pygocentrus_nattereri
ENSGACG00000001542	si:rp71-84d19.3	100	57.085	ENSRNOG00000002044	Gtpbp8	92	54.753	Rattus_norvegicus
ENSGACG00000001542	si:rp71-84d19.3	99	60.569	ENSRBIG00000040114	GTPBP8	95	67.066	Rhinopithecus_bieti
ENSGACG00000001542	si:rp71-84d19.3	99	60.976	ENSRROG00000016262	GTPBP8	86	60.976	Rhinopithecus_roxellana
ENSGACG00000001542	si:rp71-84d19.3	99	60.000	ENSSBOG00000025468	GTPBP8	97	68.421	Saimiri_boliviensis_boliviensis
ENSGACG00000001542	si:rp71-84d19.3	99	56.327	ENSSHAG00000002292	GTPBP8	87	56.327	Sarcophilus_harrisii
ENSGACG00000001542	si:rp71-84d19.3	99	68.443	ENSSFOG00015013992	gtpbp8	94	65.683	Scleropages_formosus
ENSGACG00000001542	si:rp71-84d19.3	100	86.939	ENSSMAG00000002103	si:rp71-84d19.3	96	81.625	Scophthalmus_maximus
ENSGACG00000001542	si:rp71-84d19.3	100	86.122	ENSSDUG00000000998	si:rp71-84d19.3	98	83.274	Seriola_dumerili
ENSGACG00000001542	si:rp71-84d19.3	70	84.795	ENSSLDG00000012459	si:rp71-84d19.3	95	84.795	Seriola_lalandi_dorsalis
ENSGACG00000001542	si:rp71-84d19.3	100	63.265	ENSSPUG00000005036	GTPBP8	89	60.938	Sphenodon_punctatus
ENSGACG00000001542	si:rp71-84d19.3	100	87.347	ENSSPAG00000012870	si:rp71-84d19.3	98	82.206	Stegastes_partitus
ENSGACG00000001542	si:rp71-84d19.3	100	58.130	ENSSSCG00000036952	GTPBP8	94	57.422	Sus_scrofa
ENSGACG00000001542	si:rp71-84d19.3	99	60.656	ENSTGUG00000013421	GTPBP8	96	57.752	Taeniopygia_guttata
ENSGACG00000001542	si:rp71-84d19.3	100	82.041	ENSTRUG00000001494	si:rp71-84d19.3	98	75.532	Takifugu_rubripes
ENSGACG00000001542	si:rp71-84d19.3	100	84.490	ENSTNIG00000017825	si:rp71-84d19.3	100	75.972	Tetraodon_nigroviridis
ENSGACG00000001542	si:rp71-84d19.3	64	64.103	ENSUAMG00000011983	-	98	64.103	Ursus_americanus
ENSGACG00000001542	si:rp71-84d19.3	64	64.103	ENSUMAG00000004565	-	98	64.103	Ursus_maritimus
ENSGACG00000001542	si:rp71-84d19.3	100	58.537	ENSVVUG00000021995	GTPBP8	78	58.943	Vulpes_vulpes
ENSGACG00000001542	si:rp71-84d19.3	99	66.255	ENSXETG00000016308	gtpbp8	98	59.011	Xenopus_tropicalis
ENSGACG00000001542	si:rp71-84d19.3	70	81.977	ENSXCOG00000014591	si:rp71-84d19.3	95	81.977	Xiphophorus_couchianus
ENSGACG00000001542	si:rp71-84d19.3	100	82.041	ENSXMAG00000004437	si:rp71-84d19.3	97	75.000	Xiphophorus_maculatus