EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000001634 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10705 bases
Position: chrscaffold_120:260404-271108
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002145	EST1	PF10374.9	2.8e-25	1	1
ENSGACP00000002147	EST1	PF10374.9	3.3e-25	1	1
ENSGACP00000002145	EST1_DNA_bind	PF10373.9	2.1e-45	1	1
ENSGACP00000002147	EST1_DNA_bind	PF10373.9	2.2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002151	-	3326	-	ENSGACP00000002145	1094 (aa)	-	G3NA03
ENSGACT00000002153	-	3294	-	ENSGACP00000002147	1098 (aa)	-	G3NA05

Gene Model

Click here to download ENSGACG00000001634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001634	smg7	99	65.061	ENSG00000116698	SMG7	88	91.925	Homo_sapiens
ENSGACG00000001634	smg7	89	89.355	ENSAPOG00000009611	smg7	93	89.355	Acanthochromis_polyacanthus
ENSGACG00000001634	smg7	99	62.764	ENSAMEG00000002357	SMG7	97	62.665	Ailuropoda_melanoleuca
ENSGACG00000001634	smg7	97	79.368	ENSACIG00000015152	smg7	97	79.870	Amphilophus_citrinellus
ENSGACG00000001634	smg7	99	84.000	ENSAOCG00000013538	smg7	97	85.600	Amphiprion_ocellaris
ENSGACG00000001634	smg7	99	83.748	ENSAPEG00000007851	smg7	97	85.258	Amphiprion_percula
ENSGACG00000001634	smg7	99	84.164	ENSATEG00000006931	smg7	97	84.431	Anabas_testudineus
ENSGACG00000001634	smg7	99	63.061	ENSAPLG00000015811	SMG7	97	62.533	Anas_platyrhynchos
ENSGACG00000001634	smg7	96	64.706	ENSACAG00000014989	SMG7	97	60.150	Anolis_carolinensis
ENSGACG00000001634	smg7	99	64.581	ENSANAG00000028114	SMG7	85	91.720	Aotus_nancymaae
ENSGACG00000001634	smg7	99	81.843	ENSACLG00000022079	smg7	97	81.753	Astatotilapia_calliptera
ENSGACG00000001634	smg7	99	72.816	ENSAMXG00000020809	smg7	98	72.038	Astyanax_mexicanus
ENSGACG00000001634	smg7	99	64.943	ENSBTAG00000008003	SMG7	97	62.973	Bos_taurus
ENSGACG00000001634	smg7	99	64.680	ENSCJAG00000005135	SMG7	86	91.720	Callithrix_jacchus
ENSGACG00000001634	smg7	99	64.654	ENSCAFG00000013276	SMG7	94	64.737	Canis_familiaris
ENSGACG00000001634	smg7	99	64.654	ENSCAFG00020015475	SMG7	89	89.024	Canis_lupus_dingo
ENSGACG00000001634	smg7	100	64.721	ENSCHIG00000018192	SMG7	97	64.721	Capra_hircus
ENSGACG00000001634	smg7	99	64.799	ENSTSYG00000002667	SMG7	80	92.903	Carlito_syrichta
ENSGACG00000001634	smg7	99	64.654	ENSCPOG00000008906	SMG7	97	63.596	Cavia_porcellus
ENSGACG00000001634	smg7	99	63.357	ENSCCAG00000028596	SMG7	85	91.720	Cebus_capucinus
ENSGACG00000001634	smg7	99	65.061	ENSCATG00000011063	SMG7	85	91.720	Cercocebus_atys
ENSGACG00000001634	smg7	99	65.240	ENSCLAG00000010751	SMG7	97	64.685	Chinchilla_lanigera
ENSGACG00000001634	smg7	99	65.149	ENSCSAG00000012654	SMG7	94	64.680	Chlorocebus_sabaeus
ENSGACG00000001634	smg7	92	58.947	ENSCHOG00000010522	SMG7	87	62.222	Choloepus_hoffmanni
ENSGACG00000001634	smg7	98	65.870	ENSCPBG00000015724	SMG7	97	63.126	Chrysemys_picta_bellii
ENSGACG00000001634	smg7	99	63.139	ENSCANG00000015680	SMG7	85	91.720	Colobus_angolensis_palliatus
ENSGACG00000001634	smg7	99	64.392	ENSCGRG00001013705	Smg7	97	64.073	Cricetulus_griseus_chok1gshd
ENSGACG00000001634	smg7	99	64.211	ENSCGRG00000018401	Smg7	96	63.891	Cricetulus_griseus_crigri
ENSGACG00000001634	smg7	98	78.488	ENSCVAG00000011842	smg7	97	82.857	Cyprinodon_variegatus
ENSGACG00000001634	smg7	99	68.031	ENSDARG00000060767	smg7	97	72.291	Danio_rerio
ENSGACG00000001634	smg7	99	64.629	ENSDORG00000007331	Smg7	97	64.073	Dipodomys_ordii
ENSGACG00000001634	smg7	99	64.789	ENSETEG00000002654	SMG7	99	64.229	Echinops_telfairi
ENSGACG00000001634	smg7	99	65.328	ENSEASG00005006524	SMG7	97	65.297	Equus_asinus_asinus
ENSGACG00000001634	smg7	95	82.044	ENSECAG00000004313	SMG7	94	82.044	Equus_caballus
ENSGACG00000001634	smg7	99	64.292	ENSEEUG00000002024	SMG7	94	64.085	Erinaceus_europaeus
ENSGACG00000001634	smg7	99	73.661	ENSELUG00000010293	smg7	99	73.684	Esox_lucius
ENSGACG00000001634	smg7	99	64.834	ENSFCAG00000010900	SMG7	97	65.919	Felis_catus
ENSGACG00000001634	smg7	94	65.517	ENSFALG00000003047	SMG7	98	60.580	Ficedula_albicollis
ENSGACG00000001634	smg7	99	64.855	ENSFDAG00000012121	SMG7	96	64.417	Fukomys_damarensis
ENSGACG00000001634	smg7	99	79.215	ENSFHEG00000011073	smg7	98	79.839	Fundulus_heteroclitus
ENSGACG00000001634	smg7	90	80.075	ENSGMOG00000004916	smg7	91	80.075	Gadus_morhua
ENSGACG00000001634	smg7	99	62.992	ENSGALG00000004667	SMG7	97	63.430	Gallus_gallus
ENSGACG00000001634	smg7	99	79.304	ENSGAFG00000019000	smg7	98	79.234	Gambusia_affinis
ENSGACG00000001634	smg7	99	64.974	ENSGGOG00000002342	SMG7	82	91.195	Gorilla_gorilla
ENSGACG00000001634	smg7	99	81.957	ENSHBUG00000003726	smg7	99	85.542	Haplochromis_burtoni
ENSGACG00000001634	smg7	98	64.867	ENSHGLG00000009353	SMG7	98	64.956	Heterocephalus_glaber_female
ENSGACG00000001634	smg7	99	63.237	ENSHGLG00100009637	-	97	63.363	Heterocephalus_glaber_male
ENSGACG00000001634	smg7	99	59.738	ENSHGLG00100004878	-	97	59.615	Heterocephalus_glaber_male
ENSGACG00000001634	smg7	99	72.946	ENSIPUG00000016997	smg7	98	71.928	Ictalurus_punctatus
ENSGACG00000001634	smg7	99	65.472	ENSSTOG00000000401	SMG7	97	64.685	Ictidomys_tridecemlineatus
ENSGACG00000001634	smg7	99	65.122	ENSJJAG00000012351	Smg7	97	64.336	Jaculus_jaculus
ENSGACG00000001634	smg7	97	74.317	ENSKMAG00000004900	smg7	97	75.207	Kryptolebias_marmoratus
ENSGACG00000001634	smg7	54	75.879	ENSLBEG00000005220	-	76	75.960	Labrus_bergylta
ENSGACG00000001634	smg7	99	84.851	ENSLBEG00000002983	smg7	97	84.851	Labrus_bergylta
ENSGACG00000001634	smg7	99	65.794	ENSLACG00000000972	SMG7	97	65.852	Latimeria_chalumnae
ENSGACG00000001634	smg7	99	65.659	ENSLOCG00000002010	smg7	97	65.827	Lepisosteus_oculatus
ENSGACG00000001634	smg7	99	64.623	ENSLAFG00000008186	SMG7	97	64.123	Loxodonta_africana
ENSGACG00000001634	smg7	99	65.240	ENSMFAG00000031653	SMG7	85	91.720	Macaca_fascicularis
ENSGACG00000001634	smg7	99	65.061	ENSMMUG00000018458	SMG7	94	64.592	Macaca_mulatta
ENSGACG00000001634	smg7	99	63.269	ENSMNEG00000034798	SMG7	85	91.720	Macaca_nemestrina
ENSGACG00000001634	smg7	99	65.061	ENSMLEG00000037170	SMG7	97	62.533	Mandrillus_leucophaeus
ENSGACG00000001634	smg7	89	79.744	ENSMAMG00000018733	smg7	85	80.652	Mastacembelus_armatus
ENSGACG00000001634	smg7	99	82.826	ENSMZEG00005015247	smg7	97	82.111	Maylandia_zebra
ENSGACG00000001634	smg7	99	62.973	ENSMGAG00000001561	SMG7	97	63.149	Meleagris_gallopavo
ENSGACG00000001634	smg7	99	64.454	ENSMAUG00000019484	Smg7	97	64.161	Mesocricetus_auratus
ENSGACG00000001634	smg7	99	65.267	ENSMICG00000007145	SMG7	82	91.720	Microcebus_murinus
ENSGACG00000001634	smg7	99	64.803	ENSMOCG00000020748	Smg7	97	64.073	Microtus_ochrogaster
ENSGACG00000001634	smg7	93	88.889	ENSMMOG00000001524	smg7	95	88.889	Mola_mola
ENSGACG00000001634	smg7	94	63.915	ENSMODG00000007139	SMG7	99	62.709	Monodelphis_domestica
ENSGACG00000001634	smg7	99	82.543	ENSMALG00000000061	smg7	91	88.000	Monopterus_albus
ENSGACG00000001634	smg7	99	64.799	MGP_CAROLIEiJ_G0014704	Smg7	97	64.186	Mus_caroli
ENSGACG00000001634	smg7	99	64.279	ENSMUSG00000042772	Smg7	97	64.248	Mus_musculus
ENSGACG00000001634	smg7	99	64.629	MGP_PahariEiJ_G0027940	Smg7	97	64.336	Mus_pahari
ENSGACG00000001634	smg7	99	64.367	MGP_SPRETEiJ_G0015511	Smg7	97	64.336	Mus_spretus
ENSGACG00000001634	smg7	98	64.046	ENSMPUG00000011732	SMG7	95	64.570	Mustela_putorius_furo
ENSGACG00000001634	smg7	99	64.799	ENSMLUG00000015417	SMG7	97	64.768	Myotis_lucifugus
ENSGACG00000001634	smg7	99	64.304	ENSNGAG00000009836	Smg7	96	64.298	Nannospalax_galili
ENSGACG00000001634	smg7	98	75.636	ENSNBRG00000024343	smg7	95	83.799	Neolamprologus_brichardi
ENSGACG00000001634	smg7	99	65.149	ENSNLEG00000018018	SMG7	97	62.621	Nomascus_leucogenys
ENSGACG00000001634	smg7	73	100.000	ENSMEUG00000004681	SMG7	72	100.000	Notamacropus_eugenii
ENSGACG00000001634	smg7	98	60.480	ENSOPRG00000013942	SMG7	96	60.830	Ochotona_princeps
ENSGACG00000001634	smg7	99	64.978	ENSODEG00000010390	SMG7	97	64.423	Octodon_degus
ENSGACG00000001634	smg7	99	82.152	ENSONIG00000000277	smg7	97	81.973	Oreochromis_niloticus
ENSGACG00000001634	smg7	98	64.109	ENSOANG00000000994	SMG7	98	64.198	Ornithorhynchus_anatinus
ENSGACG00000001634	smg7	99	63.509	ENSOCUG00000005887	SMG7	90	63.389	Oryctolagus_cuniculus
ENSGACG00000001634	smg7	99	77.021	ENSORLG00000007314	smg7	97	77.677	Oryzias_latipes
ENSGACG00000001634	smg7	99	77.384	ENSORLG00020015779	smg7	97	78.040	Oryzias_latipes_hni
ENSGACG00000001634	smg7	99	77.293	ENSORLG00015012289	smg7	97	77.425	Oryzias_latipes_hsok
ENSGACG00000001634	smg7	99	77.652	ENSOMEG00000002328	smg7	98	77.604	Oryzias_melastigma
ENSGACG00000001634	smg7	99	64.437	ENSOGAG00000003107	SMG7	93	64.254	Otolemur_garnettii
ENSGACG00000001634	smg7	99	65.031	ENSOARG00000001352	SMG7	97	62.201	Ovis_aries
ENSGACG00000001634	smg7	99	63.357	ENSPPAG00000031619	SMG7	85	91.720	Pan_paniscus
ENSGACG00000001634	smg7	99	64.829	ENSPPRG00000011222	SMG7	95	65.088	Panthera_pardus
ENSGACG00000001634	smg7	99	64.493	ENSPTIG00000007242	SMG7	98	61.719	Panthera_tigris_altaica
ENSGACG00000001634	smg7	99	65.053	ENSPTRG00000001764	SMG7	85	91.720	Pan_troglodytes
ENSGACG00000001634	smg7	99	65.061	ENSPANG00000004520	SMG7	97	62.533	Papio_anubis
ENSGACG00000001634	smg7	100	65.925	ENSPKIG00000007242	smg7	98	65.726	Paramormyrops_kingsleyae
ENSGACG00000001634	smg7	99	64.900	ENSPSIG00000012201	SMG7	97	64.541	Pelodiscus_sinensis
ENSGACG00000001634	smg7	63	57.714	ENSPMGG00000021833	smg7	86	51.857	Periophthalmus_magnuspinnatus
ENSGACG00000001634	smg7	99	65.035	ENSPEMG00000011315	Smg7	97	64.510	Peromyscus_maniculatus_bairdii
ENSGACG00000001634	smg7	99	64.374	ENSPCIG00000003786	SMG7	89	92.500	Phascolarctos_cinereus
ENSGACG00000001634	smg7	100	78.138	ENSPFOG00000019219	smg7	98	77.882	Poecilia_formosa
ENSGACG00000001634	smg7	99	79.821	ENSPLAG00000001446	smg7	98	79.393	Poecilia_latipinna
ENSGACG00000001634	smg7	99	79.676	ENSPMEG00000005218	smg7	99	79.317	Poecilia_mexicana
ENSGACG00000001634	smg7	89	77.755	ENSPREG00000019039	smg7	91	77.465	Poecilia_reticulata
ENSGACG00000001634	smg7	99	63.357	ENSPPYG00000000427	SMG7	97	62.621	Pongo_abelii
ENSGACG00000001634	smg7	91	70.524	ENSPCAG00000008360	SMG7	88	70.524	Procavia_capensis
ENSGACG00000001634	smg7	99	65.267	ENSPCOG00000011996	SMG7	76	92.903	Propithecus_coquereli
ENSGACG00000001634	smg7	90	65.354	ENSPVAG00000000851	SMG7	89	60.914	Pteropus_vampyrus
ENSGACG00000001634	smg7	99	82.337	ENSPNYG00000007643	smg7	97	81.916	Pundamilia_nyererei
ENSGACG00000001634	smg7	99	69.558	ENSPNAG00000011374	smg7	97	78.235	Pygocentrus_nattereri
ENSGACG00000001634	smg7	99	64.572	ENSRNOG00000027962	Smg7	98	67.145	Rattus_norvegicus
ENSGACG00000001634	smg7	99	65.061	ENSRBIG00000036316	SMG7	97	62.533	Rhinopithecus_bieti
ENSGACG00000001634	smg7	99	65.240	ENSRROG00000035719	SMG7	97	64.773	Rhinopithecus_roxellana
ENSGACG00000001634	smg7	99	65.035	ENSSBOG00000023454	SMG7	88	91.925	Saimiri_boliviensis_boliviensis
ENSGACG00000001634	smg7	99	63.820	ENSSHAG00000013147	SMG7	97	62.676	Sarcophilus_harrisii
ENSGACG00000001634	smg7	91	77.576	ENSSFOG00015017252	smg7	97	77.576	Scleropages_formosus
ENSGACG00000001634	smg7	99	82.852	ENSSMAG00000006067	smg7	97	83.228	Scophthalmus_maximus
ENSGACG00000001634	smg7	97	85.007	ENSSDUG00000017543	smg7	97	84.867	Seriola_dumerili
ENSGACG00000001634	smg7	99	62.917	ENSSPUG00000002064	SMG7	97	62.224	Sphenodon_punctatus
ENSGACG00000001634	smg7	99	81.720	ENSSPAG00000008733	smg7	97	81.541	Stegastes_partitus
ENSGACG00000001634	smg7	99	65.153	ENSSSCG00000015558	SMG7	97	65.122	Sus_scrofa
ENSGACG00000001634	smg7	99	63.172	ENSTGUG00000003928	SMG7	98	63.172	Taeniopygia_guttata
ENSGACG00000001634	smg7	99	76.775	ENSTNIG00000002802	smg7	98	75.919	Tetraodon_nigroviridis
ENSGACG00000001634	smg7	79	66.857	ENSTBEG00000003220	SMG7	75	66.857	Tupaia_belangeri
ENSGACG00000001634	smg7	98	64.753	ENSTTRG00000014778	SMG7	94	64.721	Tursiops_truncatus
ENSGACG00000001634	smg7	96	61.538	ENSUAMG00000017473	SMG7	97	61.525	Ursus_americanus
ENSGACG00000001634	smg7	96	64.022	ENSUMAG00000016389	SMG7	97	64.286	Ursus_maritimus
ENSGACG00000001634	smg7	99	64.572	ENSVVUG00000008976	SMG7	97	65.359	Vulpes_vulpes
ENSGACG00000001634	smg7	99	59.127	ENSXETG00000012528	smg7	97	59.155	Xenopus_tropicalis
ENSGACG00000001634	smg7	99	79.267	ENSXMAG00000007123	smg7	98	79.286	Xiphophorus_maculatus