EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000001970 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2526 bases
Position: chrscaffold_313:2045-4570
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002558	MBD	PF01429.19	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002567	-	1616	-	ENSGACP00000002558	417 (aa)	-	G3NB62

Gene Model

Click here to download ENSGACG00000001970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000001970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000001970	-	80	49.180	ENSG00000129071	MBD4	67	54.595	Homo_sapiens
ENSGACG00000001970	-	84	48.077	ENSAPOG00000021668	mbd4	86	47.596	Acanthochromis_polyacanthus
ENSGACG00000001970	-	84	50.000	ENSAOCG00000001157	mbd4	86	50.000	Amphiprion_ocellaris
ENSGACG00000001970	-	84	50.244	ENSAPEG00000016131	mbd4	86	49.268	Amphiprion_percula
ENSGACG00000001970	-	86	48.826	ENSATEG00000014594	MBD4	80	48.592	Anabas_testudineus
ENSGACG00000001970	-	86	39.175	ENSAMXG00000017271	mbd4	79	40.336	Astyanax_mexicanus
ENSGACG00000001970	-	65	51.786	ENSCGRG00001003507	Mbd4	50	51.786	Cricetulus_griseus_chok1gshd
ENSGACG00000001970	-	65	51.786	ENSCGRG00000010974	Mbd4	50	51.786	Cricetulus_griseus_crigri
ENSGACG00000001970	-	82	44.192	ENSGAFG00000016011	mbd4	87	44.810	Gambusia_affinis
ENSGACG00000001970	-	83	45.320	ENSKMAG00000015015	mbd4	94	42.792	Kryptolebias_marmoratus
ENSGACG00000001970	-	90	42.702	ENSLBEG00000005669	MBD4	86	42.763	Labrus_bergylta
ENSGACG00000001970	-	52	70.940	ENSMNEG00000029752	MBD4	50	55.030	Macaca_nemestrina
ENSGACG00000001970	-	53	39.916	ENSMAMG00000024084	-	67	39.916	Mastacembelus_armatus
ENSGACG00000001970	-	87	46.014	ENSMALG00000021517	mbd4	82	45.538	Monopterus_albus
ENSGACG00000001970	-	78	43.038	MGP_CAROLIEiJ_G0028760	Mbd4	61	43.038	Mus_caroli
ENSGACG00000001970	-	80	50.396	ENSONIG00000017212	mbd4	86	49.868	Oreochromis_niloticus
ENSGACG00000001970	-	84	43.655	ENSORLG00000011049	mbd4	87	43.878	Oryzias_latipes
ENSGACG00000001970	-	84	45.431	ENSORLG00020020013	mbd4	87	44.987	Oryzias_latipes_hni
ENSGACG00000001970	-	84	44.416	ENSORLG00015015342	mbd4	87	44.810	Oryzias_latipes_hsok
ENSGACG00000001970	-	84	46.234	ENSOMEG00000008819	mbd4	88	43.062	Oryzias_melastigma
ENSGACG00000001970	-	80	47.312	ENSPFOG00000014471	mbd4	92	43.437	Poecilia_formosa
ENSGACG00000001970	-	80	40.997	ENSPNAG00000000509	mbd4	80	41.311	Pygocentrus_nattereri
ENSGACG00000001970	-	77	45.106	ENSRNOG00000010919	Mbd4	60	45.106	Rattus_norvegicus
ENSGACG00000001970	-	86	47.962	ENSSMAG00000013958	-	63	47.722	Scophthalmus_maximus
ENSGACG00000001970	-	90	47.404	ENSSDUG00000001365	mbd4	94	46.727	Seriola_dumerili
ENSGACG00000001970	-	87	50.000	ENSSLDG00000010295	MBD4	87	50.000	Seriola_lalandi_dorsalis
ENSGACG00000001970	-	85	45.202	ENSTRUG00000010124	mbd4	87	45.641	Takifugu_rubripes
ENSGACG00000001970	-	84	40.000	ENSTNIG00000017927	mbd4	94	40.618	Tetraodon_nigroviridis
ENSGACG00000001970	-	85	35.623	ENSXETG00000026622	mbd4	76	36.512	Xenopus_tropicalis
ENSGACG00000001970	-	80	47.423	ENSXMAG00000021129	mbd4	85	47.150	Xiphophorus_maculatus