EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002034 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 17589 bases
Position: chrgroupX:1487400-1504988
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002643	RRM_1	PF00076.22	1.7e-30	1	2
ENSGACP00000002643	RRM_1	PF00076.22	1.7e-30	2	2
ENSGACP00000002658	RRM_1	PF00076.22	3e-30	1	2
ENSGACP00000002658	RRM_1	PF00076.22	3e-30	2	2
ENSGACP00000002654	RRM_1	PF00076.22	3.5e-30	1	2
ENSGACP00000002654	RRM_1	PF00076.22	3.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002652	-	2042	-	ENSGACP00000002643	486 (aa)	-	G3NBE6
ENSGACT00000002663	-	2349	-	ENSGACP00000002654	642 (aa)	-	G3NBF7
ENSGACT00000002667	-	2171	-	ENSGACP00000002658	611 (aa)	-	G3NBG1

Gene Model

Click here to download ENSGACG00000002034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002034	sfpq	55	62.315	ENSGACG00000011824	nono	91	57.692
ENSGACG00000002034	sfpq	66	52.900	ENSGACG00000014901	pspc1	99	55.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002034	sfpq	68	74.654	ENSG00000116560	SFPQ	97	71.759	Homo_sapiens
ENSGACG00000002034	sfpq	74	83.660	ENSAPOG00000024257	sfpq	100	72.857	Acanthochromis_polyacanthus
ENSGACG00000002034	sfpq	68	74.654	ENSAMEG00000000815	SFPQ	99	74.654	Ailuropoda_melanoleuca
ENSGACG00000002034	sfpq	100	76.592	ENSACIG00000000905	sfpq	99	76.236	Amphilophus_citrinellus
ENSGACG00000002034	sfpq	99	83.298	ENSAOCG00000002889	sfpq	95	83.333	Amphiprion_ocellaris
ENSGACG00000002034	sfpq	99	83.298	ENSAPEG00000016556	sfpq	95	83.333	Amphiprion_percula
ENSGACG00000002034	sfpq	100	81.746	ENSATEG00000002981	sfpq	100	81.385	Anabas_testudineus
ENSGACG00000002034	sfpq	55	55.874	ENSANAG00000037798	-	99	55.587	Aotus_nancymaae
ENSGACG00000002034	sfpq	55	53.693	ENSANAG00000021268	-	100	51.558	Aotus_nancymaae
ENSGACG00000002034	sfpq	64	67.402	ENSANAG00000027438	-	69	61.277	Aotus_nancymaae
ENSGACG00000002034	sfpq	100	74.156	ENSACLG00000022332	sfpq	100	74.302	Astatotilapia_calliptera
ENSGACG00000002034	sfpq	81	72.311	ENSAMXG00000011538	sfpq	94	63.968	Astyanax_mexicanus
ENSGACG00000002034	sfpq	68	74.654	ENSBTAG00000016328	SFPQ	77	64.632	Bos_taurus
ENSGACG00000002034	sfpq	68	74.654	ENSCJAG00000001431	SFPQ	79	62.134	Callithrix_jacchus
ENSGACG00000002034	sfpq	68	69.515	ENSCAFG00000017608	-	89	57.635	Canis_familiaris
ENSGACG00000002034	sfpq	68	74.654	ENSCAFG00000003595	-	95	60.285	Canis_familiaris
ENSGACG00000002034	sfpq	68	71.528	ENSCAFG00000018271	-	90	58.185	Canis_familiaris
ENSGACG00000002034	sfpq	55	68.000	ENSCAFG00020010702	-	100	67.049	Canis_lupus_dingo
ENSGACG00000002034	sfpq	68	71.528	ENSCAFG00020004881	-	90	58.414	Canis_lupus_dingo
ENSGACG00000002034	sfpq	68	74.654	ENSCHIG00000023097	SFPQ	76	64.632	Capra_hircus
ENSGACG00000002034	sfpq	55	72.934	ENSTSYG00000037120	-	100	72.934	Carlito_syrichta
ENSGACG00000002034	sfpq	54	62.536	ENSTSYG00000035106	-	98	62.536	Carlito_syrichta
ENSGACG00000002034	sfpq	55	63.662	ENSCPOG00000015018	-	100	64.917	Cavia_porcellus
ENSGACG00000002034	sfpq	68	74.654	ENSCCAG00000029361	-	88	59.531	Cebus_capucinus
ENSGACG00000002034	sfpq	59	77.159	ENSCATG00000036179	-	82	59.075	Cercocebus_atys
ENSGACG00000002034	sfpq	68	50.000	ENSCATG00000032664	-	88	41.536	Cercocebus_atys
ENSGACG00000002034	sfpq	55	72.934	ENSCLAG00000009583	-	100	72.934	Chinchilla_lanigera
ENSGACG00000002034	sfpq	68	74.654	ENSCSAG00000001082	SFPQ	88	60.000	Chlorocebus_sabaeus
ENSGACG00000002034	sfpq	60	72.632	ENSCHOG00000009131	SFPQ	100	72.632	Choloepus_hoffmanni
ENSGACG00000002034	sfpq	72	71.024	ENSCPBG00000018674	SFPQ	96	58.852	Chrysemys_picta_bellii
ENSGACG00000002034	sfpq	55	72.934	ENSCANG00000028087	-	100	72.934	Colobus_angolensis_palliatus
ENSGACG00000002034	sfpq	68	74.654	ENSCGRG00001011698	Sfpq	79	64.452	Cricetulus_griseus_chok1gshd
ENSGACG00000002034	sfpq	68	75.058	ENSCGRG00000010128	Sfpq	95	74.942	Cricetulus_griseus_crigri
ENSGACG00000002034	sfpq	99	70.330	ENSCSEG00000007852	sfpq	99	68.643	Cynoglossus_semilaevis
ENSGACG00000002034	sfpq	100	65.714	ENSCVAG00000019538	sfpq	95	73.511	Cyprinodon_variegatus
ENSGACG00000002034	sfpq	95	65.691	ENSDARG00000011564	sfpq	100	86.087	Danio_rerio
ENSGACG00000002034	sfpq	68	74.654	ENSDNOG00000049454	SFPQ	61	74.654	Dasypus_novemcinctus
ENSGACG00000002034	sfpq	68	74.654	ENSDORG00000008109	Sfpq	79	64.875	Dipodomys_ordii
ENSGACG00000002034	sfpq	68	68.910	ENSETEG00000001095	SFPQ	61	64.615	Echinops_telfairi
ENSGACG00000002034	sfpq	68	74.654	ENSEASG00005012012	SFPQ	78	64.695	Equus_asinus_asinus
ENSGACG00000002034	sfpq	68	74.654	ENSECAG00000000642	SFPQ	78	64.695	Equus_caballus
ENSGACG00000002034	sfpq	80	74.089	ENSELUG00000023145	sfpq	96	67.524	Esox_lucius
ENSGACG00000002034	sfpq	68	74.654	ENSFCAG00000042862	SFPQ	86	61.138	Felis_catus
ENSGACG00000002034	sfpq	55	71.795	ENSFALG00000000731	SFPQ	100	71.795	Ficedula_albicollis
ENSGACG00000002034	sfpq	55	64.489	ENSFDAG00000017723	-	100	65.909	Fukomys_damarensis
ENSGACG00000002034	sfpq	100	76.837	ENSFHEG00000015200	sfpq	89	73.895	Fundulus_heteroclitus
ENSGACG00000002034	sfpq	95	71.336	ENSGMOG00000011957	sfpq	99	72.441	Gadus_morhua
ENSGACG00000002034	sfpq	89	88.095	ENSGMOG00000011950	SFPQ	99	88.333	Gadus_morhua
ENSGACG00000002034	sfpq	70	73.815	ENSGALG00000002514	SFPQ	99	59.259	Gallus_gallus
ENSGACG00000002034	sfpq	100	64.255	ENSGAFG00000014571	sfpq	95	69.151	Gambusia_affinis
ENSGACG00000002034	sfpq	68	74.942	ENSGGOG00000026354	SFPQ	100	72.934	Gorilla_gorilla
ENSGACG00000002034	sfpq	100	74.009	ENSHBUG00000016818	sfpq	100	74.596	Haplochromis_burtoni
ENSGACG00000002034	sfpq	68	74.371	ENSHGLG00000012001	SFPQ	87	59.490	Heterocephalus_glaber_female
ENSGACG00000002034	sfpq	55	72.934	ENSHGLG00100004136	-	100	72.934	Heterocephalus_glaber_male
ENSGACG00000002034	sfpq	98	80.931	ENSHCOG00000008612	sfpq	99	66.883	Hippocampus_comes
ENSGACG00000002034	sfpq	76	75.693	ENSIPUG00000013076	SFPQ	96	65.662	Ictalurus_punctatus
ENSGACG00000002034	sfpq	55	72.934	ENSSTOG00000014004	-	100	72.934	Ictidomys_tridecemlineatus
ENSGACG00000002034	sfpq	68	74.654	ENSJJAG00000015633	Sfpq	78	64.260	Jaculus_jaculus
ENSGACG00000002034	sfpq	94	76.264	ENSKMAG00000000238	sfpq	88	77.662	Kryptolebias_marmoratus
ENSGACG00000002034	sfpq	100	71.491	ENSLBEG00000003163	sfpq	98	74.138	Labrus_bergylta
ENSGACG00000002034	sfpq	69	73.804	ENSLACG00000014728	SFPQ	71	73.804	Latimeria_chalumnae
ENSGACG00000002034	sfpq	68	80.607	ENSLOCG00000001067	sfpq	94	67.384	Lepisosteus_oculatus
ENSGACG00000002034	sfpq	68	74.424	ENSLAFG00000015951	SFPQ	86	64.748	Loxodonta_africana
ENSGACG00000002034	sfpq	68	74.654	ENSMFAG00000000797	SFPQ	88	59.809	Macaca_fascicularis
ENSGACG00000002034	sfpq	68	74.654	ENSMMUG00000019154	SFPQ	88	59.809	Macaca_mulatta
ENSGACG00000002034	sfpq	68	74.654	ENSMNEG00000038895	SFPQ	88	60.224	Macaca_nemestrina
ENSGACG00000002034	sfpq	55	70.085	ENSMLEG00000010643	-	100	70.085	Mandrillus_leucophaeus
ENSGACG00000002034	sfpq	51	66.564	ENSMLEG00000035352	-	99	66.564	Mandrillus_leucophaeus
ENSGACG00000002034	sfpq	100	82.381	ENSMAMG00000007875	sfpq	100	82.380	Mastacembelus_armatus
ENSGACG00000002034	sfpq	100	75.632	ENSMZEG00005026091	sfpq	100	75.334	Maylandia_zebra
ENSGACG00000002034	sfpq	60	71.501	ENSMGAG00000004237	SFPQ	100	71.247	Meleagris_gallopavo
ENSGACG00000002034	sfpq	68	74.654	ENSMAUG00000006402	Sfpq	79	64.273	Mesocricetus_auratus
ENSGACG00000002034	sfpq	68	74.654	ENSMICG00000027265	SFPQ	87	60.650	Microcebus_murinus
ENSGACG00000002034	sfpq	68	71.889	ENSMOCG00000019075	Sfpq	99	66.935	Microtus_ochrogaster
ENSGACG00000002034	sfpq	100	79.055	ENSMMOG00000001074	sfpq	100	75.643	Mola_mola
ENSGACG00000002034	sfpq	68	74.134	ENSMODG00000017937	SFPQ	74	68.463	Monodelphis_domestica
ENSGACG00000002034	sfpq	100	76.752	ENSMALG00000010381	sfpq	99	77.547	Monopterus_albus
ENSGACG00000002034	sfpq	68	74.654	MGP_CAROLIEiJ_G0026487	Sfpq	80	62.248	Mus_caroli
ENSGACG00000002034	sfpq	68	74.654	ENSMUSG00000028820	Sfpq	80	62.248	Mus_musculus
ENSGACG00000002034	sfpq	68	74.654	MGP_PahariEiJ_G0028818	Sfpq	80	62.248	Mus_pahari
ENSGACG00000002034	sfpq	68	74.654	MGP_SPRETEiJ_G0027466	Sfpq	80	62.248	Mus_spretus
ENSGACG00000002034	sfpq	70	73.923	ENSMLUG00000027090	SFPQ	99	73.923	Myotis_lucifugus
ENSGACG00000002034	sfpq	68	74.885	ENSNGAG00000000888	Sfpq	80	63.419	Nannospalax_galili
ENSGACG00000002034	sfpq	100	74.443	ENSNBRG00000017479	sfpq	100	75.334	Neolamprologus_brichardi
ENSGACG00000002034	sfpq	55	72.934	ENSNLEG00000035521	-	100	72.934	Nomascus_leucogenys
ENSGACG00000002034	sfpq	68	74.306	ENSMEUG00000014082	SFPQ	64	71.678	Notamacropus_eugenii
ENSGACG00000002034	sfpq	75	70.062	ENSOPRG00000013696	SFPQ	64	73.009	Ochotona_princeps
ENSGACG00000002034	sfpq	66	65.083	ENSODEG00000005485	SFPQ	94	58.712	Octodon_degus
ENSGACG00000002034	sfpq	100	74.408	ENSONIG00000017737	sfpq	99	75.000	Oreochromis_niloticus
ENSGACG00000002034	sfpq	55	73.143	ENSOANG00000008789	-	100	73.143	Ornithorhynchus_anatinus
ENSGACG00000002034	sfpq	68	74.654	ENSOCUG00000001877	SFPQ	85	74.654	Oryctolagus_cuniculus
ENSGACG00000002034	sfpq	100	66.301	ENSORLG00000007459	sfpq	100	66.116	Oryzias_latipes
ENSGACG00000002034	sfpq	100	66.575	ENSORLG00020011818	sfpq	100	65.152	Oryzias_latipes_hni
ENSGACG00000002034	sfpq	100	65.984	ENSORLG00015002131	sfpq	100	64.973	Oryzias_latipes_hsok
ENSGACG00000002034	sfpq	100	66.214	ENSOMEG00000018020	sfpq	95	78.807	Oryzias_melastigma
ENSGACG00000002034	sfpq	68	74.654	ENSOGAG00000027710	SFPQ	96	66.922	Otolemur_garnettii
ENSGACG00000002034	sfpq	68	75.000	ENSOARG00000019439	SFPQ	66	75.000	Ovis_aries
ENSGACG00000002034	sfpq	68	74.654	ENSPPAG00000030078	SFPQ	61	74.654	Pan_paniscus
ENSGACG00000002034	sfpq	55	72.727	ENSPPRG00000015478	-	100	72.727	Panthera_pardus
ENSGACG00000002034	sfpq	55	72.934	ENSPTIG00000007710	-	100	72.934	Panthera_tigris_altaica
ENSGACG00000002034	sfpq	68	69.124	ENSPTRG00000000518	SFPQ	87	56.140	Pan_troglodytes
ENSGACG00000002034	sfpq	68	74.654	ENSPANG00000005380	SFPQ	73	68.775	Papio_anubis
ENSGACG00000002034	sfpq	95	66.444	ENSPKIG00000023035	sfpq	96	67.652	Paramormyrops_kingsleyae
ENSGACG00000002034	sfpq	68	74.884	ENSPSIG00000011494	SFPQ	100	74.246	Pelodiscus_sinensis
ENSGACG00000002034	sfpq	100	65.172	ENSPMGG00000023883	sfpq	100	65.091	Periophthalmus_magnuspinnatus
ENSGACG00000002034	sfpq	71	72.889	ENSPEMG00000009794	Sfpq	94	71.215	Peromyscus_maniculatus_bairdii
ENSGACG00000002034	sfpq	50	75.309	ENSPMAG00000005583	sfpq	93	58.658	Petromyzon_marinus
ENSGACG00000002034	sfpq	68	74.134	ENSPCIG00000000923	SFPQ	98	55.540	Phascolarctos_cinereus
ENSGACG00000002034	sfpq	100	67.063	ENSPFOG00000003127	sfpq	99	65.056	Poecilia_formosa
ENSGACG00000002034	sfpq	100	67.883	ENSPREG00000008060	sfpq	93	74.843	Poecilia_reticulata
ENSGACG00000002034	sfpq	68	74.654	ENSPPYG00000001560	SFPQ	88	59.968	Pongo_abelii
ENSGACG00000002034	sfpq	67	74.592	ENSPCAG00000006164	SFPQ	60	74.592	Procavia_capensis
ENSGACG00000002034	sfpq	68	74.654	ENSPCOG00000027127	SFPQ	88	60.064	Propithecus_coquereli
ENSGACG00000002034	sfpq	68	72.454	ENSPVAG00000001865	SFPQ	73	64.648	Pteropus_vampyrus
ENSGACG00000002034	sfpq	100	73.295	ENSPNYG00000007494	sfpq	100	73.585	Pundamilia_nyererei
ENSGACG00000002034	sfpq	95	67.049	ENSPNAG00000002128	sfpq	95	67.617	Pygocentrus_nattereri
ENSGACG00000002034	sfpq	68	74.654	ENSRNOG00000058461	Sfpq	71	68.972	Rattus_norvegicus
ENSGACG00000002034	sfpq	87	55.556	ENSRBIG00000035286	SFPQ	100	72.934	Rhinopithecus_bieti
ENSGACG00000002034	sfpq	65	74.654	ENSRROG00000040992	SFPQ	100	72.934	Rhinopithecus_roxellana
ENSGACG00000002034	sfpq	53	54.252	ENSSBOG00000033925	-	99	52.478	Saimiri_boliviensis_boliviensis
ENSGACG00000002034	sfpq	55	72.934	ENSSBOG00000024972	-	100	72.934	Saimiri_boliviensis_boliviensis
ENSGACG00000002034	sfpq	55	70.201	ENSSHAG00000012312	-	100	68.768	Sarcophilus_harrisii
ENSGACG00000002034	sfpq	70	70.087	ENSSHAG00000016107	-	99	69.651	Sarcophilus_harrisii
ENSGACG00000002034	sfpq	83	72.780	ENSSFOG00015009289	sfpq	96	66.498	Scleropages_formosus
ENSGACG00000002034	sfpq	100	79.338	ENSSMAG00000018201	sfpq	100	76.818	Scophthalmus_maximus
ENSGACG00000002034	sfpq	100	80.401	ENSSDUG00000008402	sfpq	100	80.275	Seriola_dumerili
ENSGACG00000002034	sfpq	100	80.154	ENSSLDG00000018917	sfpq	100	80.183	Seriola_lalandi_dorsalis
ENSGACG00000002034	sfpq	58	74.185	ENSSARG00000006409	SFPQ	100	74.185	Sorex_araneus
ENSGACG00000002034	sfpq	100	76.339	ENSSPAG00000016550	sfpq	100	78.869	Stegastes_partitus
ENSGACG00000002034	sfpq	68	74.654	ENSSSCG00000035690	SFPQ	62	74.654	Sus_scrofa
ENSGACG00000002034	sfpq	68	74.419	ENSTGUG00000001722	SFPQ	100	74.246	Taeniopygia_guttata
ENSGACG00000002034	sfpq	100	74.667	ENSTRUG00000003783	sfpq	100	74.963	Takifugu_rubripes
ENSGACG00000002034	sfpq	87	76.389	ENSTNIG00000011331	sfpq	99	76.254	Tetraodon_nigroviridis
ENSGACG00000002034	sfpq	66	79.008	ENSTBEG00000006238	SFPQ	62	54.945	Tupaia_belangeri
ENSGACG00000002034	sfpq	68	72.811	ENSTTRG00000013930	SFPQ	62	72.811	Tursiops_truncatus
ENSGACG00000002034	sfpq	55	70.655	ENSUMAG00000008056	-	100	70.655	Ursus_maritimus
ENSGACG00000002034	sfpq	53	80.769	ENSVPAG00000006960	-	65	63.677	Vicugna_pacos
ENSGACG00000002034	sfpq	55	66.189	ENSVVUG00000000874	-	100	66.189	Vulpes_vulpes
ENSGACG00000002034	sfpq	72	67.457	ENSXETG00000009682	sfpq	97	78.977	Xenopus_tropicalis
ENSGACG00000002034	sfpq	99	59.563	ENSXMAG00000016391	sfpq	93	75.227	Xiphophorus_maculatus