EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002053 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 17227 bases
Position: chrscaffold_56:202709-219935
Accession: ZDB-GENE-040407-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002666	Surp	PF01805.20	4.5e-17	1	1
ENSGACP00000002666	G-patch	PF01585.23	9.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002675	-	3277	-	ENSGACP00000002666	913 (aa)	-	G3NBG9

Gene Model

Click here to download ENSGACG00000002053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002053	cherp	98	62.128	ENSG00000085872	CHERP	99	62.593	Homo_sapiens
ENSGACG00000002053	cherp	60	82.826	ENSAPOG00000009646	cherp	98	83.935	Acanthochromis_polyacanthus
ENSGACG00000002053	cherp	98	64.009	ENSAMEG00000010048	CHERP	99	64.807	Ailuropoda_melanoleuca
ENSGACG00000002053	cherp	99	84.108	ENSAOCG00000017846	cherp	99	84.649	Amphiprion_ocellaris
ENSGACG00000002053	cherp	99	84.307	ENSAPEG00000021128	cherp	99	84.848	Amphiprion_percula
ENSGACG00000002053	cherp	99	83.135	ENSATEG00000006341	cherp	99	83.693	Anabas_testudineus
ENSGACG00000002053	cherp	76	63.512	ENSAPLG00000010773	CHERP	99	62.061	Anas_platyrhynchos
ENSGACG00000002053	cherp	50	66.122	ENSACAG00000011583	CHERP	99	68.116	Anolis_carolinensis
ENSGACG00000002053	cherp	98	60.707	ENSANAG00000024284	CHERP	99	61.910	Aotus_nancymaae
ENSGACG00000002053	cherp	99	83.801	ENSACLG00000020053	cherp	99	84.233	Astatotilapia_calliptera
ENSGACG00000002053	cherp	99	68.148	ENSAMXG00000021637	cherp	94	69.758	Astyanax_mexicanus
ENSGACG00000002053	cherp	98	62.896	ENSBTAG00000005289	CHERP	99	62.806	Bos_taurus
ENSGACG00000002053	cherp	98	60.811	ENSCJAG00000040462	CHERP	99	61.910	Callithrix_jacchus
ENSGACG00000002053	cherp	99	62.420	ENSCAFG00000015671	CHERP	99	63.057	Canis_familiaris
ENSGACG00000002053	cherp	98	61.765	ENSCAFG00020009941	CHERP	99	62.225	Canis_lupus_dingo
ENSGACG00000002053	cherp	87	78.788	ENSCHIG00000013765	CHERP	94	85.542	Capra_hircus
ENSGACG00000002053	cherp	87	60.308	ENSCAPG00000000910	CHERP	71	64.307	Cavia_aperea
ENSGACG00000002053	cherp	78	63.648	ENSCPOG00000019949	CHERP	98	61.250	Cavia_porcellus
ENSGACG00000002053	cherp	98	61.514	ENSCCAG00000031534	CHERP	99	62.015	Cebus_capucinus
ENSGACG00000002053	cherp	98	61.199	ENSCATG00000031409	CHERP	99	61.910	Cercocebus_atys
ENSGACG00000002053	cherp	86	64.090	ENSCLAG00000005484	CHERP	97	61.406	Chinchilla_lanigera
ENSGACG00000002053	cherp	98	62.087	ENSCSAG00000005740	CHERP	99	62.912	Chlorocebus_sabaeus
ENSGACG00000002053	cherp	99	61.587	ENSCPBG00000014970	CHERP	99	62.646	Chrysemys_picta_bellii
ENSGACG00000002053	cherp	67	53.448	ENSCING00000004814	-	52	74.725	Ciona_intestinalis
ENSGACG00000002053	cherp	98	62.407	ENSCANG00000032053	CHERP	99	63.018	Colobus_angolensis_palliatus
ENSGACG00000002053	cherp	98	61.402	ENSCGRG00001023316	Cherp	98	61.900	Cricetulus_griseus_chok1gshd
ENSGACG00000002053	cherp	99	62.342	ENSCGRG00000015901	Cherp	99	62.845	Cricetulus_griseus_crigri
ENSGACG00000002053	cherp	78	80.027	ENSCSEG00000019700	cherp	100	79.912	Cynoglossus_semilaevis
ENSGACG00000002053	cherp	75	76.791	ENSCVAG00000003622	cherp	93	77.364	Cyprinodon_variegatus
ENSGACG00000002053	cherp	99	68.074	ENSDARG00000021812	cherp	98	73.234	Danio_rerio
ENSGACG00000002053	cherp	78	64.103	ENSDORG00000027623	Cherp	100	62.527	Dipodomys_ordii
ENSGACG00000002053	cherp	61	61.818	FBgn0261872	scaf6	92	32.479	Drosophila_melanogaster
ENSGACG00000002053	cherp	77	68.103	ENSETEG00000019543	CHERP	82	69.658	Echinops_telfairi
ENSGACG00000002053	cherp	78	64.589	ENSEASG00005000428	CHERP	91	63.270	Equus_asinus_asinus
ENSGACG00000002053	cherp	98	62.553	ENSECAG00000012713	CHERP	99	63.057	Equus_caballus
ENSGACG00000002053	cherp	98	71.630	ENSELUG00000023026	cherp	79	73.297	Esox_lucius
ENSGACG00000002053	cherp	98	61.635	ENSFCAG00000013172	CHERP	99	62.094	Felis_catus
ENSGACG00000002053	cherp	78	64.314	ENSFALG00000013410	CHERP	86	62.821	Ficedula_albicollis
ENSGACG00000002053	cherp	78	58.498	ENSFDAG00000015981	CHERP	81	58.793	Fukomys_damarensis
ENSGACG00000002053	cherp	87	92.135	ENSFHEG00000009720	cherp	79	72.083	Fundulus_heteroclitus
ENSGACG00000002053	cherp	98	77.473	ENSGMOG00000008654	cherp	99	78.642	Gadus_morhua
ENSGACG00000002053	cherp	78	64.477	ENSGALG00000003824	CHERP	88	62.955	Gallus_gallus
ENSGACG00000002053	cherp	99	61.587	ENSGAGG00000014208	CHERP	99	62.646	Gopherus_agassizii
ENSGACG00000002053	cherp	86	53.550	ENSGGOG00000016348	CHERP	97	53.310	Gorilla_gorilla
ENSGACG00000002053	cherp	99	83.801	ENSHBUG00000007405	cherp	99	84.233	Haplochromis_burtoni
ENSGACG00000002053	cherp	98	62.047	ENSHGLG00000002993	CHERP	98	62.211	Heterocephalus_glaber_female
ENSGACG00000002053	cherp	50	69.006	ENSHGLG00100010390	CHERP	55	68.986	Heterocephalus_glaber_male
ENSGACG00000002053	cherp	78	77.442	ENSHCOG00000007691	cherp	99	78.739	Hippocampus_comes
ENSGACG00000002053	cherp	99	68.568	ENSIPUG00000025008	cherp	99	70.354	Ictalurus_punctatus
ENSGACG00000002053	cherp	98	62.634	ENSSTOG00000012089	CHERP	99	64.523	Ictidomys_tridecemlineatus
ENSGACG00000002053	cherp	78	63.838	ENSJJAG00000017982	Cherp	81	64.993	Jaculus_jaculus
ENSGACG00000002053	cherp	99	80.454	ENSKMAG00000009101	cherp	99	81.533	Kryptolebias_marmoratus
ENSGACG00000002053	cherp	78	80.464	ENSLBEG00000007586	cherp	91	82.104	Labrus_bergylta
ENSGACG00000002053	cherp	78	63.953	ENSLACG00000018221	CHERP	100	63.318	Latimeria_chalumnae
ENSGACG00000002053	cherp	99	71.658	ENSLOCG00000003654	cherp	99	72.406	Lepisosteus_oculatus
ENSGACG00000002053	cherp	98	62.353	ENSLAFG00000009096	CHERP	99	64.909	Loxodonta_africana
ENSGACG00000002053	cherp	98	61.263	ENSMFAG00000033267	CHERP	99	61.975	Macaca_fascicularis
ENSGACG00000002053	cherp	78	63.089	ENSMMUG00000012958	CHERP	81	64.062	Macaca_mulatta
ENSGACG00000002053	cherp	98	61.263	ENSMNEG00000004125	CHERP	99	61.975	Macaca_nemestrina
ENSGACG00000002053	cherp	92	66.469	ENSMLEG00000044337	CHERP	99	65.875	Mandrillus_leucophaeus
ENSGACG00000002053	cherp	99	82.590	ENSMAMG00000022269	cherp	99	84.307	Mastacembelus_armatus
ENSGACG00000002053	cherp	99	83.693	ENSMZEG00005018014	cherp	99	84.125	Maylandia_zebra
ENSGACG00000002053	cherp	66	67.717	ENSMGAG00000005571	CHERP	98	62.181	Meleagris_gallopavo
ENSGACG00000002053	cherp	98	61.490	ENSMAUG00000015856	Cherp	98	61.990	Mesocricetus_auratus
ENSGACG00000002053	cherp	78	64.333	ENSMICG00000004577	CHERP	99	62.474	Microcebus_murinus
ENSGACG00000002053	cherp	98	62.208	ENSMOCG00000014697	Cherp	98	62.818	Microtus_ochrogaster
ENSGACG00000002053	cherp	99	79.892	ENSMMOG00000008525	cherp	97	80.649	Mola_mola
ENSGACG00000002053	cherp	99	81.955	ENSMALG00000020688	cherp	99	83.459	Monopterus_albus
ENSGACG00000002053	cherp	98	60.883	MGP_CAROLIEiJ_G0031220	Cherp	98	61.684	Mus_caroli
ENSGACG00000002053	cherp	78	63.364	ENSMUSG00000052488	Cherp	98	61.725	Mus_musculus
ENSGACG00000002053	cherp	98	61.530	MGP_PahariEiJ_G0021685	Cherp	98	62.354	Mus_pahari
ENSGACG00000002053	cherp	98	61.563	MGP_SPRETEiJ_G0032341	Cherp	98	61.814	Mus_spretus
ENSGACG00000002053	cherp	78	64.636	ENSMPUG00000016023	CHERP	77	65.572	Mustela_putorius_furo
ENSGACG00000002053	cherp	78	60.158	ENSMLUG00000013881	CHERP	99	58.624	Myotis_lucifugus
ENSGACG00000002053	cherp	98	61.611	ENSNGAG00000023323	Cherp	99	63.750	Nannospalax_galili
ENSGACG00000002053	cherp	98	62.234	ENSNLEG00000005536	CHERP	99	63.057	Nomascus_leucogenys
ENSGACG00000002053	cherp	85	72.368	ENSMEUG00000010840	CHERP	90	72.607	Notamacropus_eugenii
ENSGACG00000002053	cherp	78	64.933	ENSODEG00000001528	CHERP	81	65.333	Octodon_degus
ENSGACG00000002053	cherp	99	83.477	ENSONIG00000007686	cherp	99	83.909	Oreochromis_niloticus
ENSGACG00000002053	cherp	99	79.307	ENSORLG00000000138	cherp	99	79.740	Oryzias_latipes
ENSGACG00000002053	cherp	99	79.090	ENSORLG00020013142	cherp	99	79.523	Oryzias_latipes_hni
ENSGACG00000002053	cherp	99	79.307	ENSORLG00015008911	cherp	99	79.523	Oryzias_latipes_hsok
ENSGACG00000002053	cherp	99	79.389	ENSOMEG00000016947	cherp	99	80.305	Oryzias_melastigma
ENSGACG00000002053	cherp	98	61.448	ENSOGAG00000005834	CHERP	98	61.996	Otolemur_garnettii
ENSGACG00000002053	cherp	78	56.782	ENSOARG00000018876	CHERP	78	57.407	Ovis_aries
ENSGACG00000002053	cherp	98	61.094	ENSPPAG00000029195	CHERP	99	61.595	Pan_paniscus
ENSGACG00000002053	cherp	98	61.635	ENSPPRG00000003275	CHERP	99	62.094	Panthera_pardus
ENSGACG00000002053	cherp	98	53.159	ENSPTIG00000019778	CHERP	94	85.185	Panthera_tigris_altaica
ENSGACG00000002053	cherp	98	62.062	ENSPTRG00000010647	CHERP	99	62.527	Pan_troglodytes
ENSGACG00000002053	cherp	98	61.263	ENSPANG00000011698	CHERP	99	61.975	Papio_anubis
ENSGACG00000002053	cherp	78	64.411	ENSPKIG00000000423	cherp	96	60.606	Paramormyrops_kingsleyae
ENSGACG00000002053	cherp	98	63.023	ENSPSIG00000011974	CHERP	99	63.344	Pelodiscus_sinensis
ENSGACG00000002053	cherp	98	67.234	ENSPMGG00000023606	cherp	79	73.103	Periophthalmus_magnuspinnatus
ENSGACG00000002053	cherp	98	60.625	ENSPEMG00000011238	Cherp	98	61.331	Peromyscus_maniculatus_bairdii
ENSGACG00000002053	cherp	99	77.381	ENSPFOG00000016899	cherp	99	78.384	Poecilia_formosa
ENSGACG00000002053	cherp	84	78.266	ENSPMEG00000002214	cherp	76	82.526	Poecilia_mexicana
ENSGACG00000002053	cherp	98	78.907	ENSPREG00000020774	cherp	99	79.344	Poecilia_reticulata
ENSGACG00000002053	cherp	98	60.365	ENSPPYG00000009691	CHERP	99	60.814	Pongo_abelii
ENSGACG00000002053	cherp	89	77.551	ENSPCAG00000001337	CHERP	89	84.337	Procavia_capensis
ENSGACG00000002053	cherp	56	87.302	ENSPCOG00000022788	CHERP	99	87.302	Propithecus_coquereli
ENSGACG00000002053	cherp	98	59.448	ENSPVAG00000004320	CHERP	89	84.337	Pteropus_vampyrus
ENSGACG00000002053	cherp	99	84.017	ENSPNYG00000003942	cherp	99	84.449	Pundamilia_nyererei
ENSGACG00000002053	cherp	99	68.416	ENSPNAG00000017179	cherp	99	69.465	Pygocentrus_nattereri
ENSGACG00000002053	cherp	98	60.883	ENSRNOG00000012323	Cherp	98	61.789	Rattus_norvegicus
ENSGACG00000002053	cherp	98	62.513	ENSRBIG00000038621	CHERP	98	63.191	Rhinopithecus_bieti
ENSGACG00000002053	cherp	98	61.263	ENSRROG00000040770	CHERP	99	61.975	Rhinopithecus_roxellana
ENSGACG00000002053	cherp	98	61.345	ENSSBOG00000014492	CHERP	99	61.845	Saimiri_boliviensis_boliviensis
ENSGACG00000002053	cherp	86	82.278	ENSSFOG00015008022	cherp	88	70.278	Scleropages_formosus
ENSGACG00000002053	cherp	99	79.935	ENSSMAG00000005362	cherp	99	81.974	Scophthalmus_maximus
ENSGACG00000002053	cherp	99	84.127	ENSSDUG00000019712	cherp	99	84.868	Seriola_dumerili
ENSGACG00000002053	cherp	99	84.845	ENSSLDG00000012659	cherp	99	85.592	Seriola_lalandi_dorsalis
ENSGACG00000002053	cherp	98	63.478	ENSSPUG00000008901	CHERP	99	62.879	Sphenodon_punctatus
ENSGACG00000002053	cherp	99	84.035	ENSSPAG00000010681	cherp	98	86.038	Stegastes_partitus
ENSGACG00000002053	cherp	98	61.789	ENSSSCG00000013860	CHERP	99	63.270	Sus_scrofa
ENSGACG00000002053	cherp	78	64.362	ENSTGUG00000000680	CHERP	99	62.540	Taeniopygia_guttata
ENSGACG00000002053	cherp	99	75.161	ENSTRUG00000007429	cherp	99	77.312	Takifugu_rubripes
ENSGACG00000002053	cherp	98	74.257	ENSTNIG00000003363	cherp	79	77.686	Tetraodon_nigroviridis
ENSGACG00000002053	cherp	88	59.632	ENSTTRG00000015006	CHERP	89	61.594	Tursiops_truncatus
ENSGACG00000002053	cherp	76	62.993	ENSUAMG00000017295	CHERP	79	64.276	Ursus_americanus
ENSGACG00000002053	cherp	98	61.506	ENSVVUG00000016546	CHERP	99	62.069	Vulpes_vulpes
ENSGACG00000002053	cherp	98	61.818	ENSXETG00000002072	cherp	97	62.633	Xenopus_tropicalis