EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002123 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3122 bases
Position: chrgroupV:132777-135898
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002758	RIO1	PF01163.22	2.3e-06	1	1
ENSGACP00000002756	RIO1	PF01163.22	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002766	-	1074	-	ENSGACP00000002756	358 (aa)	-	G3NBQ9
ENSGACT00000002768	-	900	-	ENSGACP00000002758	300 (aa)	-	G3NBR1

Gene Model

Click here to download ENSGACG00000002123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002123	-	96	36.082	ENSGACG00000011358	camk1gb	67	35.786
ENSGACG00000002123	-	88	42.804	ENSGACG00000017307	dapk2a	59	42.804
ENSGACG00000002123	-	88	31.225	ENSGACG00000020273	rps6ka4	68	32.016
ENSGACG00000002123	-	97	43.854	ENSGACG00000010201	dapk2b	82	43.854
ENSGACG00000002123	-	95	40.136	ENSGACG00000016942	dapk3	65	40.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002123	-	99	72.635	ENSONIG00000001203	mylk5	64	74.150	Oreochromis_niloticus
ENSGACG00000002123	-	99	72.635	ENSONIG00000019875	-	64	74.150	Oreochromis_niloticus
ENSGACG00000002123	-	99	84.797	ENSPNYG00000019509	-	85	81.973	Pundamilia_nyererei
ENSGACG00000002123	-	90	83.333	ENSTNIG00000004928	-	68	83.904	Tetraodon_nigroviridis
ENSGACG00000002123	-	99	83.838	ENSXCOG00000005927	-	90	79.078	Xiphophorus_couchianus