EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002136 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1102 bases
Position: chrscaffold_56:962747-963848
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002772	Mitoc_L55	PF09776.9	3.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002782	-	276	-	ENSGACP00000002772	92 (aa)	-	G3NBS4

Gene Model

Click here to download ENSGACG00000002136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002136	zgc:171480	100	79.348	ENSAPOG00000002881	zgc:171480	64	79.348	Acanthochromis_polyacanthus
ENSGACG00000002136	zgc:171480	100	78.261	ENSACIG00000001646	zgc:171480	68	78.261	Amphilophus_citrinellus
ENSGACG00000002136	zgc:171480	100	81.522	ENSAOCG00000016155	zgc:171480	64	81.522	Amphiprion_ocellaris
ENSGACG00000002136	zgc:171480	100	81.522	ENSAPEG00000022327	zgc:171480	64	81.522	Amphiprion_percula
ENSGACG00000002136	zgc:171480	99	79.121	ENSATEG00000005625	zgc:171480	62	79.121	Anabas_testudineus
ENSGACG00000002136	zgc:171480	100	65.591	ENSACAG00000006897	-	73	63.441	Anolis_carolinensis
ENSGACG00000002136	zgc:171480	100	77.174	ENSACLG00000005172	zgc:171480	67	77.174	Astatotilapia_calliptera
ENSGACG00000002136	zgc:171480	99	73.626	ENSAMXG00000043839	zgc:171480	69	73.626	Astyanax_mexicanus
ENSGACG00000002136	zgc:171480	100	64.516	ENSCPBG00000001771	-	73	62.366	Chrysemys_picta_bellii
ENSGACG00000002136	zgc:171480	100	68.478	ENSCSEG00000019533	zgc:171480	66	68.478	Cynoglossus_semilaevis
ENSGACG00000002136	zgc:171480	100	66.304	ENSDARG00000043402	zgc:171480	69	66.304	Danio_rerio
ENSGACG00000002136	zgc:171480	99	66.304	ENSELUG00000007716	zgc:171480	70	64.130	Esox_lucius
ENSGACG00000002136	zgc:171480	99	52.747	ENSFALG00000001083	-	94	52.747	Ficedula_albicollis
ENSGACG00000002136	zgc:171480	100	76.087	ENSFHEG00000000203	zgc:171480	66	76.087	Fundulus_heteroclitus
ENSGACG00000002136	zgc:171480	100	80.435	ENSGMOG00000019009	zgc:171480	90	80.435	Gadus_morhua
ENSGACG00000002136	zgc:171480	99	51.648	ENSGALG00000038820	-	80	55.435	Gallus_gallus
ENSGACG00000002136	zgc:171480	100	80.435	ENSGAFG00000004832	-	64	80.435	Gambusia_affinis
ENSGACG00000002136	zgc:171480	100	58.696	ENSGAGG00000001806	-	74	58.696	Gopherus_agassizii
ENSGACG00000002136	zgc:171480	100	77.174	ENSHBUG00000007895	zgc:171480	67	77.174	Haplochromis_burtoni
ENSGACG00000002136	zgc:171480	100	89.130	ENSHCOG00000003526	zgc:171480	51	89.130	Hippocampus_comes
ENSGACG00000002136	zgc:171480	99	68.478	ENSIPUG00000001273	mrpl55	70	66.304	Ictalurus_punctatus
ENSGACG00000002136	zgc:171480	100	78.261	ENSKMAG00000002011	zgc:171480	72	78.261	Kryptolebias_marmoratus
ENSGACG00000002136	zgc:171480	100	83.696	ENSLBEG00000016107	-	73	83.696	Labrus_bergylta
ENSGACG00000002136	zgc:171480	100	83.696	ENSLBEG00000010915	zgc:171480	73	83.696	Labrus_bergylta
ENSGACG00000002136	zgc:171480	100	65.591	ENSLACG00000016281	zgc:171480	70	62.366	Latimeria_chalumnae
ENSGACG00000002136	zgc:171480	100	79.348	ENSMAMG00000022250	zgc:171480	63	79.348	Mastacembelus_armatus
ENSGACG00000002136	zgc:171480	100	77.174	ENSMZEG00005015585	zgc:171480	67	77.174	Maylandia_zebra
ENSGACG00000002136	zgc:171480	99	53.261	ENSMGAG00000002612	-	80	53.261	Meleagris_gallopavo
ENSGACG00000002136	zgc:171480	100	56.522	ENSMMOG00000008740	-	69	56.522	Mola_mola
ENSGACG00000002136	zgc:171480	100	75.000	ENSMALG00000019823	zgc:171480	73	75.000	Monopterus_albus
ENSGACG00000002136	zgc:171480	100	77.174	ENSNBRG00000019447	zgc:171480	67	77.174	Neolamprologus_brichardi
ENSGACG00000002136	zgc:171480	100	77.174	ENSONIG00000007645	zgc:171480	68	77.174	Oreochromis_niloticus
ENSGACG00000002136	zgc:171480	100	69.565	ENSORLG00020006963	zgc:171480	69	69.565	Oryzias_latipes_hni
ENSGACG00000002136	zgc:171480	100	70.652	ENSORLG00015003266	zgc:171480	69	70.652	Oryzias_latipes_hsok
ENSGACG00000002136	zgc:171480	100	72.826	ENSOMEG00000008184	zgc:171480	67	72.826	Oryzias_melastigma
ENSGACG00000002136	zgc:171480	99	67.391	ENSPKIG00000006753	zgc:171480	71	67.391	Paramormyrops_kingsleyae
ENSGACG00000002136	zgc:171480	100	58.696	ENSPSIG00000010893	-	74	58.696	Pelodiscus_sinensis
ENSGACG00000002136	zgc:171480	100	69.892	ENSPMGG00000012657	-	72	64.516	Periophthalmus_magnuspinnatus
ENSGACG00000002136	zgc:171480	100	52.083	ENSPMAG00000000867	zgc:171480	80	51.064	Petromyzon_marinus
ENSGACG00000002136	zgc:171480	99	55.914	ENSPCIG00000021848	-	73	52.174	Phascolarctos_cinereus
ENSGACG00000002136	zgc:171480	100	78.261	ENSPFOG00000012703	zgc:171480	66	78.261	Poecilia_formosa
ENSGACG00000002136	zgc:171480	100	79.348	ENSPREG00000020328	zgc:171480	66	79.348	Poecilia_reticulata
ENSGACG00000002136	zgc:171480	99	71.739	ENSPNAG00000017309	zgc:171480	70	70.652	Pygocentrus_nattereri
ENSGACG00000002136	zgc:171480	99	68.478	ENSSFOG00015015668	mrpl55	70	68.478	Scleropages_formosus
ENSGACG00000002136	zgc:171480	100	80.435	ENSSMAG00000005429	zgc:171480	66	80.435	Scophthalmus_maximus
ENSGACG00000002136	zgc:171480	100	79.348	ENSSDUG00000022556	zgc:171480	63	79.348	Seriola_dumerili
ENSGACG00000002136	zgc:171480	100	78.261	ENSSLDG00000019598	zgc:171480	63	78.261	Seriola_lalandi_dorsalis
ENSGACG00000002136	zgc:171480	100	55.435	ENSSPUG00000000735	-	74	55.435	Sphenodon_punctatus
ENSGACG00000002136	zgc:171480	100	77.174	ENSSPAG00000011598	zgc:171480	65	77.174	Stegastes_partitus
ENSGACG00000002136	zgc:171480	100	77.174	ENSTRUG00000003082	zgc:171480	65	77.174	Takifugu_rubripes
ENSGACG00000002136	zgc:171480	100	78.261	ENSXCOG00000005887	zgc:171480	75	78.261	Xiphophorus_couchianus
ENSGACG00000002136	zgc:171480	100	78.261	ENSXMAG00000007937	zgc:171480	66	78.261	Xiphophorus_maculatus