EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbfox3
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 67557 bases
Position: chrscaffold_54:345251-412807
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002784	Fox-1_C	PF12414.8	1.8e-37	1	1
ENSGACP00000002784	RRM_1	PF00076.22	9.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002794	-	1125	-	ENSGACP00000002784	374 (aa)	-	G3NBT6

Gene Model

Click here to download ENSGACG00000002138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002138	-	82	46.389	ENSGACG00000007174	-	81	46.556
ENSGACG00000002138	-	74	52.424	ENSGACG00000015968	rbfox2	74	50.442
ENSGACG00000002138	-	93	52.486	ENSGACG00000010757	rbfox1l	80	52.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002138	-	92	72.000	ENSG00000167281	RBFOX3	99	89.333	Homo_sapiens
ENSGACG00000002138	-	76	80.531	ENSAPOG00000015658	-	79	95.833	Acanthochromis_polyacanthus
ENSGACG00000002138	-	100	72.487	ENSAPOG00000021630	rbfox3b	82	71.625	Acanthochromis_polyacanthus
ENSGACG00000002138	-	96	60.976	ENSAMEG00000014170	RBFOX3	91	61.220	Ailuropoda_melanoleuca
ENSGACG00000002138	-	80	86.275	ENSACIG00000010817	rbfox3b	95	86.275	Amphilophus_citrinellus
ENSGACG00000002138	-	92	66.301	ENSACIG00000003768	-	83	65.143	Amphilophus_citrinellus
ENSGACG00000002138	-	73	94.118	ENSAOCG00000010786	-	79	94.118	Amphiprion_ocellaris
ENSGACG00000002138	-	96	71.703	ENSAOCG00000012358	rbfox3b	81	70.774	Amphiprion_ocellaris
ENSGACG00000002138	-	75	82.222	ENSAPEG00000019081	rbfox3b	74	93.939	Amphiprion_percula
ENSGACG00000002138	-	72	95.833	ENSAPEG00000015891	-	79	95.833	Amphiprion_percula
ENSGACG00000002138	-	93	69.972	ENSATEG00000023101	-	93	69.122	Anabas_testudineus
ENSGACG00000002138	-	97	71.545	ENSATEG00000019945	rbfox3b	96	70.621	Anabas_testudineus
ENSGACG00000002138	-	96	69.863	ENSACAG00000016093	RBFOX3	83	68.000	Anolis_carolinensis
ENSGACG00000002138	-	92	67.143	ENSANAG00000023457	RBFOX3	95	66.000	Aotus_nancymaae
ENSGACG00000002138	-	100	71.429	ENSACLG00000020011	rbfox3b	95	69.054	Astatotilapia_calliptera
ENSGACG00000002138	-	96	76.099	ENSACLG00000025552	-	81	74.785	Astatotilapia_calliptera
ENSGACG00000002138	-	96	68.407	ENSAMXG00000042841	rbfox3b	85	67.335	Astyanax_mexicanus
ENSGACG00000002138	-	93	73.164	ENSAMXG00000037246	rbfox3a	90	73.219	Astyanax_mexicanus
ENSGACG00000002138	-	92	63.429	ENSBTAG00000006280	RBFOX3	95	62.857	Bos_taurus
ENSGACG00000002138	-	92	71.143	ENSCJAG00000009563	RBFOX3	96	70.571	Callithrix_jacchus
ENSGACG00000002138	-	76	73.103	ENSCAFG00000005547	RBFOX3	100	66.465	Canis_familiaris
ENSGACG00000002138	-	96	72.527	ENSCAFG00020008126	RBFOX3	96	71.978	Canis_lupus_dingo
ENSGACG00000002138	-	96	72.527	ENSCHIG00000009124	RBFOX3	96	71.978	Capra_hircus
ENSGACG00000002138	-	92	72.857	ENSTSYG00000029617	RBFOX3	96	72.857	Carlito_syrichta
ENSGACG00000002138	-	96	72.678	ENSCPOG00000021703	RBFOX3	96	72.131	Cavia_porcellus
ENSGACG00000002138	-	92	67.143	ENSCCAG00000028450	RBFOX3	82	89.583	Cebus_capucinus
ENSGACG00000002138	-	92	68.000	ENSCATG00000018349	RBFOX3	95	66.857	Cercocebus_atys
ENSGACG00000002138	-	96	72.802	ENSCLAG00000006449	RBFOX3	96	72.802	Chinchilla_lanigera
ENSGACG00000002138	-	92	68.000	ENSCSAG00000002355	RBFOX3	95	66.857	Chlorocebus_sabaeus
ENSGACG00000002138	-	96	68.871	ENSCPBG00000010904	RBFOX3	95	67.908	Chrysemys_picta_bellii
ENSGACG00000002138	-	96	72.527	ENSCANG00000043120	RBFOX3	96	71.978	Colobus_angolensis_palliatus
ENSGACG00000002138	-	96	70.685	ENSCGRG00001019476	Rbfox3	96	72.603	Cricetulus_griseus_chok1gshd
ENSGACG00000002138	-	96	70.685	ENSCGRG00000003268	Rbfox3	96	72.603	Cricetulus_griseus_crigri
ENSGACG00000002138	-	80	87.603	ENSCSEG00000015567	RBFOX3	89	87.448	Cynoglossus_semilaevis
ENSGACG00000002138	-	99	56.464	ENSCSEG00000020606	RBFOX3	87	57.307	Cynoglossus_semilaevis
ENSGACG00000002138	-	96	71.703	ENSCVAG00000006882	rbfox3b	81	69.628	Cyprinodon_variegatus
ENSGACG00000002138	-	80	81.250	ENSDARG00000074310	rbfox3b	97	58.394	Danio_rerio
ENSGACG00000002138	-	92	73.504	ENSDARG00000010083	rbfox3a	91	73.504	Danio_rerio
ENSGACG00000002138	-	76	73.448	ENSDNOG00000039391	RBFOX3	76	72.759	Dasypus_novemcinctus
ENSGACG00000002138	-	96	65.110	ENSDORG00000005352	Rbfox3	96	64.560	Dipodomys_ordii
ENSGACG00000002138	-	83	47.692	ENSEBUG00000013559	RBFOX3	71	46.732	Eptatretus_burgeri
ENSGACG00000002138	-	100	59.542	ENSEBUG00000002129	RBFOX3	92	60.317	Eptatretus_burgeri
ENSGACG00000002138	-	92	66.382	ENSEASG00005005059	RBFOX3	95	67.806	Equus_asinus_asinus
ENSGACG00000002138	-	92	66.097	ENSECAG00000023811	RBFOX3	95	67.521	Equus_caballus
ENSGACG00000002138	-	96	61.475	ENSEEUG00000013974	RBFOX3	96	61.475	Erinaceus_europaeus
ENSGACG00000002138	-	100	72.487	ENSELUG00000017963	rbfox3b	95	63.085	Esox_lucius
ENSGACG00000002138	-	96	68.407	ENSFCAG00000002555	RBFOX3	95	67.308	Felis_catus
ENSGACG00000002138	-	96	59.194	ENSFALG00000012288	RBFOX3	92	58.122	Ficedula_albicollis
ENSGACG00000002138	-	96	66.940	ENSFDAG00000007489	RBFOX3	96	66.393	Fukomys_damarensis
ENSGACG00000002138	-	96	63.462	ENSFHEG00000008550	rbfox3b	95	62.178	Fundulus_heteroclitus
ENSGACG00000002138	-	100	65.079	ENSGMOG00000019304	-	91	73.026	Gadus_morhua
ENSGACG00000002138	-	92	70.201	ENSGALG00000032889	RBFOX3	83	69.054	Gallus_gallus
ENSGACG00000002138	-	80	86.275	ENSGAFG00000005025	rbfox3b	83	86.275	Gambusia_affinis
ENSGACG00000002138	-	96	68.871	ENSGAGG00000020025	RBFOX3	95	67.908	Gopherus_agassizii
ENSGACG00000002138	-	96	72.527	ENSGGOG00000012546	RBFOX3	96	71.978	Gorilla_gorilla
ENSGACG00000002138	-	100	71.429	ENSHBUG00000018099	rbfox3b	82	71.074	Haplochromis_burtoni
ENSGACG00000002138	-	100	76.720	ENSHBUG00000023098	-	90	75.482	Haplochromis_burtoni
ENSGACG00000002138	-	96	71.467	ENSHGLG00000008679	RBFOX3	96	71.196	Heterocephalus_glaber_female
ENSGACG00000002138	-	96	67.663	ENSHGLG00100014739	RBFOX3	96	67.935	Heterocephalus_glaber_male
ENSGACG00000002138	-	94	63.202	ENSHCOG00000007444	RBFOX3	78	63.277	Hippocampus_comes
ENSGACG00000002138	-	76	91.489	ENSHCOG00000001863	RBFOX3	86	91.489	Hippocampus_comes
ENSGACG00000002138	-	96	72.329	ENSIPUG00000012010	rbfox3a	90	70.655	Ictalurus_punctatus
ENSGACG00000002138	-	97	60.929	ENSIPUG00000021966	rbfox3b	88	74.583	Ictalurus_punctatus
ENSGACG00000002138	-	96	59.722	ENSSTOG00000026817	RBFOX3	95	58.889	Ictidomys_tridecemlineatus
ENSGACG00000002138	-	96	73.077	ENSJJAG00000014167	Rbfox3	96	72.527	Jaculus_jaculus
ENSGACG00000002138	-	96	71.703	ENSKMAG00000006726	rbfox3b	87	80.753	Kryptolebias_marmoratus
ENSGACG00000002138	-	100	72.751	ENSLBEG00000004030	rbfox3b	95	84.314	Labrus_bergylta
ENSGACG00000002138	-	92	78.510	ENSLBEG00000022508	-	81	78.510	Labrus_bergylta
ENSGACG00000002138	-	96	59.233	ENSLACG00000018409	-	93	58.753	Latimeria_chalumnae
ENSGACG00000002138	-	92	75.358	ENSLOCG00000012267	rbfox3a	90	74.212	Lepisosteus_oculatus
ENSGACG00000002138	-	96	73.901	ENSLAFG00000016623	RBFOX3	96	73.901	Loxodonta_africana
ENSGACG00000002138	-	92	72.000	ENSMFAG00000002247	RBFOX3	96	71.429	Macaca_fascicularis
ENSGACG00000002138	-	92	68.000	ENSMMUG00000023028	RBFOX3	86	86.957	Macaca_mulatta
ENSGACG00000002138	-	96	67.582	ENSMNEG00000041147	RBFOX3	96	67.582	Macaca_nemestrina
ENSGACG00000002138	-	92	68.000	ENSMLEG00000025686	RBFOX3	95	66.857	Mandrillus_leucophaeus
ENSGACG00000002138	-	96	72.312	ENSMAMG00000020600	-	92	72.312	Mastacembelus_armatus
ENSGACG00000002138	-	80	86.275	ENSMAMG00000019810	rbfox3b	95	86.275	Mastacembelus_armatus
ENSGACG00000002138	-	63	71.481	ENSMZEG00005003055	-	54	87.903	Maylandia_zebra
ENSGACG00000002138	-	100	71.429	ENSMZEG00005000781	rbfox3b	82	71.074	Maylandia_zebra
ENSGACG00000002138	-	55	75.962	ENSMGAG00000005600	RBFOX3	73	78.462	Meleagris_gallopavo
ENSGACG00000002138	-	96	72.527	ENSMAUG00000013543	Rbfox3	96	72.527	Mesocricetus_auratus
ENSGACG00000002138	-	100	72.032	ENSMICG00000014898	RBFOX3	97	71.978	Microcebus_murinus
ENSGACG00000002138	-	96	73.352	ENSMOCG00000015373	Rbfox3	96	73.352	Microtus_ochrogaster
ENSGACG00000002138	-	96	69.672	ENSMMOG00000020193	rbfox3b	91	61.990	Mola_mola
ENSGACG00000002138	-	92	68.481	ENSMODG00000002089	RBFOX3	83	67.335	Monodelphis_domestica
ENSGACG00000002138	-	100	79.365	ENSMALG00000018270	-	93	92.308	Monopterus_albus
ENSGACG00000002138	-	96	70.879	ENSMALG00000020407	rbfox3b	81	69.054	Monopterus_albus
ENSGACG00000002138	-	96	73.077	MGP_CAROLIEiJ_G0017487	Rbfox3	99	86.111	Mus_caroli
ENSGACG00000002138	-	96	72.802	ENSMUSG00000025576	Rbfox3	99	86.111	Mus_musculus
ENSGACG00000002138	-	96	71.233	MGP_PahariEiJ_G0018614	Rbfox3	99	86.806	Mus_pahari
ENSGACG00000002138	-	96	73.352	MGP_SPRETEiJ_G0018331	Rbfox3	99	86.111	Mus_spretus
ENSGACG00000002138	-	96	62.594	ENSMPUG00000012319	RBFOX3	91	61.596	Mustela_putorius_furo
ENSGACG00000002138	-	96	73.901	ENSNGAG00000018006	Rbfox3	96	73.901	Nannospalax_galili
ENSGACG00000002138	-	73	93.939	ENSNBRG00000022885	-	76	93.939	Neolamprologus_brichardi
ENSGACG00000002138	-	96	69.505	ENSNBRG00000010102	rbfox3b	75	93.333	Neolamprologus_brichardi
ENSGACG00000002138	-	60	88.889	ENSNLEG00000000153	-	79	88.889	Nomascus_leucogenys
ENSGACG00000002138	-	92	51.003	ENSMEUG00000004218	-	96	50.430	Notamacropus_eugenii
ENSGACG00000002138	-	64	71.257	ENSOPRG00000016279	-	71	71.257	Ochotona_princeps
ENSGACG00000002138	-	96	72.802	ENSODEG00000009433	RBFOX3	96	72.802	Octodon_degus
ENSGACG00000002138	-	100	74.074	ENSONIG00000009549	rbfox3b	96	73.554	Oreochromis_niloticus
ENSGACG00000002138	-	96	76.099	ENSONIG00000007282	-	87	74.785	Oreochromis_niloticus
ENSGACG00000002138	-	77	63.668	ENSOCUG00000014217	RBFOX3	79	63.322	Oryctolagus_cuniculus
ENSGACG00000002138	-	100	73.016	ENSORLG00000000905	rbfox3b	67	66.667	Oryzias_latipes
ENSGACG00000002138	-	100	73.016	ENSORLG00020018030	rbfox3b	81	70.201	Oryzias_latipes_hni
ENSGACG00000002138	-	100	69.466	ENSORLG00015009200	rbfox3b	92	84.314	Oryzias_latipes_hsok
ENSGACG00000002138	-	64	75.875	ENSOMEG00000014677	rbfox3b	74	68.750	Oryzias_melastigma
ENSGACG00000002138	-	96	64.781	ENSOGAG00000029595	RBFOX3	90	63.753	Otolemur_garnettii
ENSGACG00000002138	-	86	54.493	ENSOARG00000002908	RBFOX3	83	56.936	Ovis_aries
ENSGACG00000002138	-	80	69.737	ENSPPAG00000025383	RBFOX3	90	70.062	Pan_paniscus
ENSGACG00000002138	-	92	71.143	ENSPPRG00000007819	RBFOX3	96	70.571	Panthera_pardus
ENSGACG00000002138	-	96	72.527	ENSPTRG00000009727	RBFOX3	96	71.978	Pan_troglodytes
ENSGACG00000002138	-	92	68.000	ENSPANG00000019837	RBFOX3	95	66.857	Papio_anubis
ENSGACG00000002138	-	100	58.947	ENSPKIG00000022633	-	85	57.923	Paramormyrops_kingsleyae
ENSGACG00000002138	-	96	74.380	ENSPKIG00000010299	rbfox3a	85	66.579	Paramormyrops_kingsleyae
ENSGACG00000002138	-	83	67.089	ENSPMGG00000008000	rbfox3b	77	66.113	Periophthalmus_magnuspinnatus
ENSGACG00000002138	-	96	73.077	ENSPEMG00000010500	Rbfox3	96	73.077	Peromyscus_maniculatus_bairdii
ENSGACG00000002138	-	63	59.921	ENSPMAG00000008689	rbfox3b	99	60.714	Petromyzon_marinus
ENSGACG00000002138	-	96	70.442	ENSPCIG00000005766	RBFOX3	96	71.633	Phascolarctos_cinereus
ENSGACG00000002138	-	100	72.487	ENSPFOG00000018294	rbfox3b	96	66.848	Poecilia_formosa
ENSGACG00000002138	-	65	89.130	ENSPLAG00000000481	rbfox3b	80	69.805	Poecilia_latipinna
ENSGACG00000002138	-	96	63.462	ENSPMEG00000022997	rbfox3b	95	62.178	Poecilia_mexicana
ENSGACG00000002138	-	97	71.390	ENSPREG00000012886	rbfox3b	86	69.628	Poecilia_reticulata
ENSGACG00000002138	-	96	57.418	ENSPPYG00000008704	RBFOX3	91	56.593	Pongo_abelii
ENSGACG00000002138	-	92	72.571	ENSPCAG00000001401	RBFOX3	96	71.148	Procavia_capensis
ENSGACG00000002138	-	99	70.370	ENSPCOG00000012689	RBFOX3	97	71.714	Propithecus_coquereli
ENSGACG00000002138	-	92	62.784	ENSPVAG00000015243	RBFOX3	96	64.205	Pteropus_vampyrus
ENSGACG00000002138	-	71	93.333	ENSPNYG00000010414	rbfox3b	75	93.333	Pundamilia_nyererei
ENSGACG00000002138	-	73	93.939	ENSPNYG00000009079	-	72	93.939	Pundamilia_nyererei
ENSGACG00000002138	-	96	74.247	ENSPNAG00000002889	rbfox3a	82	74.247	Pygocentrus_nattereri
ENSGACG00000002138	-	79	76.271	ENSPNAG00000018173	rbfox3b	88	74.576	Pygocentrus_nattereri
ENSGACG00000002138	-	96	71.233	ENSRNOG00000003386	Rbfox3	96	73.151	Rattus_norvegicus
ENSGACG00000002138	-	92	68.000	ENSRBIG00000040449	RBFOX3	84	66.857	Rhinopithecus_bieti
ENSGACG00000002138	-	92	68.000	ENSRROG00000000766	RBFOX3	95	66.857	Rhinopithecus_roxellana
ENSGACG00000002138	-	96	71.703	ENSSBOG00000031591	RBFOX3	96	71.154	Saimiri_boliviensis_boliviensis
ENSGACG00000002138	-	96	58.824	ENSSHAG00000016076	RBFOX3	95	58.453	Sarcophilus_harrisii
ENSGACG00000002138	-	96	75.482	ENSSFOG00015023260	rbfox3a	82	74.380	Scleropages_formosus
ENSGACG00000002138	-	93	57.670	ENSSFOG00015004716	RBFOX3	84	59.259	Scleropages_formosus
ENSGACG00000002138	-	96	75.275	ENSSMAG00000019052	-	95	73.352	Scophthalmus_maximus
ENSGACG00000002138	-	100	68.957	ENSSMAG00000012618	rbfox3b	71	65.934	Scophthalmus_maximus
ENSGACG00000002138	-	96	69.973	ENSSDUG00000015801	-	80	88.596	Seriola_dumerili
ENSGACG00000002138	-	96	63.462	ENSSDUG00000023183	rbfox3b	95	62.178	Seriola_dumerili
ENSGACG00000002138	-	96	71.703	ENSSLDG00000000149	rbfox3b	81	70.774	Seriola_lalandi_dorsalis
ENSGACG00000002138	-	96	74.194	ENSSLDG00000016098	-	81	92.308	Seriola_lalandi_dorsalis
ENSGACG00000002138	-	92	68.286	ENSSPUG00000011733	RBFOX3	95	68.286	Sphenodon_punctatus
ENSGACG00000002138	-	80	86.275	ENSSPAG00000017571	rbfox3b	80	86.275	Stegastes_partitus
ENSGACG00000002138	-	85	69.255	ENSSPAG00000004898	-	81	68.012	Stegastes_partitus
ENSGACG00000002138	-	89	74.627	ENSSSCG00000039498	RBFOX3	100	74.627	Sus_scrofa
ENSGACG00000002138	-	100	67.188	ENSTRUG00000004894	rbfox3b	90	65.312	Takifugu_rubripes
ENSGACG00000002138	-	100	61.468	ENSTNIG00000011278	rbfox3b	92	59.382	Tetraodon_nigroviridis
ENSGACG00000002138	-	74	60.932	ENSTBEG00000004296	-	74	60.215	Tupaia_belangeri
ENSGACG00000002138	-	92	66.286	ENSTTRG00000003676	RBFOX3	96	65.714	Tursiops_truncatus
ENSGACG00000002138	-	92	68.000	ENSUAMG00000004668	RBFOX3	95	67.429	Ursus_americanus
ENSGACG00000002138	-	96	68.681	ENSVVUG00000017864	RBFOX3	95	66.857	Vulpes_vulpes
ENSGACG00000002138	-	100	55.288	ENSXETG00000020236	rbfox3	74	76.410	Xenopus_tropicalis
ENSGACG00000002138	-	96	70.685	ENSXCOG00000018262	rbfox3b	95	85.106	Xiphophorus_couchianus
ENSGACG00000002138	-	100	72.487	ENSXMAG00000012939	rbfox3b	95	59.259	Xiphophorus_maculatus