EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4340 bases
Position: chrgroupX:1557471-1561810
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002824	GTP_EFTU	PF00009.27	7.7e-53	1	1
ENSGACP00000002824	GTP_EFTU_D2	PF03144.25	5e-14	1	1
ENSGACP00000002824	GTP_EFTU_D3	PF03143.17	4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002834	-	1661	-	ENSGACP00000002824	461 (aa)	-	G3NBX6

Gene Model

Click here to download ENSGACG00000002143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002143	-	94	42.166	ENSGACG00000011035	hbs1l	62	42.166
ENSGACG00000002143	-	99	67.904	ENSGACG00000004505	si:dkey-37o8.1	100	67.320
ENSGACG00000002143	-	100	90.043	ENSGACG00000002175	-	100	90.043
ENSGACG00000002143	-	98	95.787	ENSGACG00000002182	-	100	95.445
ENSGACG00000002143	-	100	85.065	ENSGACG00000018090	eef1a1b	100	85.065
ENSGACG00000002143	-	96	31.556	ENSGACG00000012961	tufm	88	34.670
ENSGACG00000002143	-	96	38.235	ENSGACG00000004324	gspt1l	76	38.235
ENSGACG00000002143	-	95	38.776	ENSGACG00000004490	-	75	38.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002143	-	98	90.687	ENSAPOG00000004714	-	100	90.456	Acanthochromis_polyacanthus
ENSGACG00000002143	-	90	91.525	ENSACIG00000001219	-	99	91.525	Amphilophus_citrinellus
ENSGACG00000002143	-	87	92.804	ENSAOCG00000022002	-	100	92.494	Amphiprion_ocellaris
ENSGACG00000002143	-	100	88.286	ENSAOCG00000022039	-	100	88.286	Amphiprion_ocellaris
ENSGACG00000002143	-	100	88.720	ENSAPEG00000016361	-	100	88.720	Amphiprion_percula
ENSGACG00000002143	-	98	92.239	ENSATEG00000003244	-	97	91.974	Anabas_testudineus
ENSGACG00000002143	-	100	92.842	ENSACLG00000022560	-	99	92.842	Astatotilapia_calliptera
ENSGACG00000002143	-	100	82.684	WBGene00001169	eef-1A.2	99	82.684	Caenorhabditis_elegans
ENSGACG00000002143	-	100	82.684	WBGene00001168	eef-1A.1	99	82.684	Caenorhabditis_elegans
ENSGACG00000002143	-	99	84.279	ENSCING00000021478	-	99	84.279	Ciona_intestinalis
ENSGACG00000002143	-	98	81.278	ENSCING00000018894	-	99	81.034	Ciona_intestinalis
ENSGACG00000002143	-	100	77.897	ENSCING00000007703	-	99	77.897	Ciona_intestinalis
ENSGACG00000002143	-	98	81.319	ENSCING00000005126	-	100	81.075	Ciona_intestinalis
ENSGACG00000002143	-	98	81.319	ENSCSAVG00000009663	-	100	81.075	Ciona_savignyi
ENSGACG00000002143	-	99	74.783	ENSCSAVG00000001085	-	91	74.783	Ciona_savignyi
ENSGACG00000002143	-	98	78.649	ENSCSAVG00000003196	-	100	78.465	Ciona_savignyi
ENSGACG00000002143	-	99	84.868	ENSCSAVG00000006357	-	98	94.000	Ciona_savignyi
ENSGACG00000002143	-	98	93.126	ENSCSEG00000008011	-	100	92.625	Cynoglossus_semilaevis
ENSGACG00000002143	-	89	84.223	ENSCSEG00000007992	-	99	84.223	Cynoglossus_semilaevis
ENSGACG00000002143	-	90	85.266	ENSCSEG00000007972	-	100	85.266	Cynoglossus_semilaevis
ENSGACG00000002143	-	98	93.570	ENSCVAG00000019356	-	100	93.275	Cyprinodon_variegatus
ENSGACG00000002143	-	100	85.281	FBgn0284245	eEF1alpha1	99	85.281	Drosophila_melanogaster
ENSGACG00000002143	-	98	85.619	FBgn0000557	eEF1alpha2	100	85.498	Drosophila_melanogaster
ENSGACG00000002143	-	99	82.391	ENSEBUG00000015814	-	100	82.391	Eptatretus_burgeri
ENSGACG00000002143	-	98	94.013	ENSFHEG00000015054	-	100	93.709	Fundulus_heteroclitus
ENSGACG00000002143	-	98	93.792	ENSGAFG00000014646	-	100	93.492	Gambusia_affinis
ENSGACG00000002143	-	55	90.873	ENSHBUG00000017166	-	95	90.873	Haplochromis_burtoni
ENSGACG00000002143	-	98	93.126	ENSHCOG00000008468	-	100	92.842	Hippocampus_comes
ENSGACG00000002143	-	99	84.165	ENSHCOG00000008489	-	100	84.165	Hippocampus_comes
ENSGACG00000002143	-	99	84.783	ENSLBEG00000002955	-	100	84.783	Labrus_bergylta
ENSGACG00000002143	-	98	92.905	ENSLBEG00000002759	-	100	92.625	Labrus_bergylta
ENSGACG00000002143	-	98	92.905	ENSMAMG00000007715	-	100	92.625	Mastacembelus_armatus
ENSGACG00000002143	-	98	92.461	ENSMMOG00000001165	-	100	96.591	Mola_mola
ENSGACG00000002143	-	99	76.096	ENSMMOG00000018160	-	99	88.043	Mola_mola
ENSGACG00000002143	-	99	85.217	ENSMMOG00000001106	-	99	85.217	Mola_mola
ENSGACG00000002143	-	100	82.035	ENSNBRG00000017346	-	99	82.035	Neolamprologus_brichardi
ENSGACG00000002143	-	76	89.773	ENSONIG00000017760	-	98	89.773	Oreochromis_niloticus
ENSGACG00000002143	-	98	93.348	ENSORLG00000007614	eef1a	100	93.059	Oryzias_latipes
ENSGACG00000002143	-	100	91.577	ENSORLG00015002397	-	100	93.275	Oryzias_latipes_hsok
ENSGACG00000002143	-	98	93.792	ENSOMEG00000018226	-	100	93.492	Oryzias_melastigma
ENSGACG00000002143	-	98	92.035	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSGACG00000002143	-	95	49.203	ENSPMGG00000022427	-	97	58.750	Periophthalmus_magnuspinnatus
ENSGACG00000002143	-	98	93.792	ENSPFOG00000003924	-	100	92.978	Poecilia_formosa
ENSGACG00000002143	-	98	93.792	ENSPLAG00000004316	-	100	93.492	Poecilia_latipinna
ENSGACG00000002143	-	98	93.570	ENSPMEG00000001010	-	100	93.275	Poecilia_mexicana
ENSGACG00000002143	-	100	92.208	ENSPREG00000008243	-	100	93.492	Poecilia_reticulata
ENSGACG00000002143	-	100	92.842	ENSPNYG00000007263	-	99	92.842	Pundamilia_nyererei
ENSGACG00000002143	-	96	81.633	YBR118W	TEF2	100	80.217	Saccharomyces_cerevisiae
ENSGACG00000002143	-	96	81.633	YPR080W	TEF1	100	80.217	Saccharomyces_cerevisiae
ENSGACG00000002143	-	98	82.452	ENSSMAG00000018469	-	100	82.402	Scophthalmus_maximus
ENSGACG00000002143	-	53	90.984	ENSSMAG00000016277	-	100	90.551	Scophthalmus_maximus
ENSGACG00000002143	-	98	92.018	ENSSDUG00000008198	-	100	91.757	Seriola_dumerili
ENSGACG00000002143	-	98	90.466	ENSSPAG00000001710	-	100	90.239	Stegastes_partitus
ENSGACG00000002143	-	99	85.870	ENSTRUG00000005066	-	99	85.870	Takifugu_rubripes
ENSGACG00000002143	-	98	93.348	ENSTRUG00000005727	ef-1a	100	93.059	Takifugu_rubripes
ENSGACG00000002143	-	98	93.792	ENSTNIG00000002619	-	100	93.492	Tetraodon_nigroviridis
ENSGACG00000002143	-	99	81.957	ENSTNIG00000002617	-	96	81.957	Tetraodon_nigroviridis
ENSGACG00000002143	-	98	93.792	ENSXCOG00000001542	-	100	97.674	Xiphophorus_couchianus