EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002200 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: zgc:162396
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2320 bases
Position: chrgroupXVI:4216514-4218833
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002858	Methyltransf_31	PF13847.6	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002868	-	1583	-	ENSGACP00000002858	282 (aa)	-	G3NC09

Gene Model

Click here to download ENSGACG00000002200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002200	zgc:162396	96	41.758	ENSGACG00000014722	si:ch211-93g23.2	99	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002200	zgc:162396	96	73.432	ENSAPOG00000015421	zgc:162396	99	73.432	Acanthochromis_polyacanthus
ENSGACG00000002200	zgc:162396	96	74.908	ENSACIG00000015427	zgc:162396	99	74.908	Amphilophus_citrinellus
ENSGACG00000002200	zgc:162396	96	74.908	ENSAOCG00000004131	zgc:162396	99	74.908	Amphiprion_ocellaris
ENSGACG00000002200	zgc:162396	96	74.908	ENSAPEG00000008189	zgc:162396	99	74.908	Amphiprion_percula
ENSGACG00000002200	zgc:162396	97	69.708	ENSATEG00000011813	zgc:162396	99	69.708	Anabas_testudineus
ENSGACG00000002200	zgc:162396	95	48.327	ENSAPLG00000012593	-	99	48.327	Anas_platyrhynchos
ENSGACG00000002200	zgc:162396	96	72.694	ENSACLG00000006906	zgc:162396	99	72.694	Astatotilapia_calliptera
ENSGACG00000002200	zgc:162396	96	61.624	ENSAMXG00000030552	zgc:162396	99	61.624	Astyanax_mexicanus
ENSGACG00000002200	zgc:162396	90	52.756	ENSAMXG00000037578	zgc:162396	97	53.125	Astyanax_mexicanus
ENSGACG00000002200	zgc:162396	96	47.778	ENSCPBG00000002804	-	99	47.778	Chrysemys_picta_bellii
ENSGACG00000002200	zgc:162396	95	32.472	ENSCING00000012960	-	99	32.472	Ciona_intestinalis
ENSGACG00000002200	zgc:162396	96	70.849	ENSCVAG00000021429	zgc:162396	99	70.849	Cyprinodon_variegatus
ENSGACG00000002200	zgc:162396	96	59.779	ENSDARG00000069549	zgc:162396	98	72.222	Danio_rerio
ENSGACG00000002200	zgc:162396	96	66.421	ENSELUG00000005372	zgc:162396	99	66.421	Esox_lucius
ENSGACG00000002200	zgc:162396	96	45.556	ENSFALG00000012826	-	99	45.556	Ficedula_albicollis
ENSGACG00000002200	zgc:162396	96	66.790	ENSFHEG00000005224	-	99	66.790	Fundulus_heteroclitus
ENSGACG00000002200	zgc:162396	96	46.691	ENSGALG00000047535	-	100	46.691	Gallus_gallus
ENSGACG00000002200	zgc:162396	96	46.691	ENSGALG00000042073	-	100	46.691	Gallus_gallus
ENSGACG00000002200	zgc:162396	96	46.691	ENSGALG00000050548	-	100	46.691	Gallus_gallus
ENSGACG00000002200	zgc:162396	96	70.480	ENSGAFG00000018387	-	99	70.480	Gambusia_affinis
ENSGACG00000002200	zgc:162396	96	72.325	ENSHBUG00000017584	zgc:162396	99	72.325	Haplochromis_burtoni
ENSGACG00000002200	zgc:162396	96	61.255	ENSIPUG00000001159	zgc:162396	99	61.255	Ictalurus_punctatus
ENSGACG00000002200	zgc:162396	96	61.255	ENSIPUG00000001213	-	99	61.255	Ictalurus_punctatus
ENSGACG00000002200	zgc:162396	96	60.148	ENSIPUG00000001171	-	99	60.148	Ictalurus_punctatus
ENSGACG00000002200	zgc:162396	96	66.421	ENSKMAG00000018426	-	99	66.421	Kryptolebias_marmoratus
ENSGACG00000002200	zgc:162396	96	74.908	ENSLBEG00000026502	zgc:162396	99	74.908	Labrus_bergylta
ENSGACG00000002200	zgc:162396	96	47.601	ENSLACG00000009261	-	99	47.601	Latimeria_chalumnae
ENSGACG00000002200	zgc:162396	96	78.967	ENSMAMG00000013213	zgc:162396	99	78.967	Mastacembelus_armatus
ENSGACG00000002200	zgc:162396	96	72.694	ENSMZEG00005000798	zgc:162396	99	72.694	Maylandia_zebra
ENSGACG00000002200	zgc:162396	96	45.818	ENSMGAG00000003269	-	100	45.818	Meleagris_gallopavo
ENSGACG00000002200	zgc:162396	96	67.159	ENSMMOG00000005445	zgc:162396	99	67.159	Mola_mola
ENSGACG00000002200	zgc:162396	96	73.063	ENSNBRG00000014954	zgc:162396	99	73.063	Neolamprologus_brichardi
ENSGACG00000002200	zgc:162396	96	73.801	ENSONIG00000004463	zgc:162396	99	73.801	Oreochromis_niloticus
ENSGACG00000002200	zgc:162396	62	42.045	ENSOANG00000015675	-	99	42.045	Ornithorhynchus_anatinus
ENSGACG00000002200	zgc:162396	99	46.786	ENSOANG00000021828	-	100	46.786	Ornithorhynchus_anatinus
ENSGACG00000002200	zgc:162396	59	63.636	ENSORLG00000018107	zgc:162396	96	63.636	Oryzias_latipes
ENSGACG00000002200	zgc:162396	96	65.683	ENSORLG00015008543	zgc:162396	99	65.683	Oryzias_latipes_hsok
ENSGACG00000002200	zgc:162396	96	66.052	ENSOMEG00000010640	zgc:162396	99	66.667	Oryzias_melastigma
ENSGACG00000002200	zgc:162396	96	62.593	ENSPKIG00000014798	zgc:162396	99	62.593	Paramormyrops_kingsleyae
ENSGACG00000002200	zgc:162396	96	45.185	ENSPSIG00000016701	-	99	45.185	Pelodiscus_sinensis
ENSGACG00000002200	zgc:162396	82	36.596	ENSPMAG00000004744	zgc:162396	100	36.596	Petromyzon_marinus
ENSGACG00000002200	zgc:162396	71	40.394	ENSPMAG00000006166	zgc:162396	100	40.394	Petromyzon_marinus
ENSGACG00000002200	zgc:162396	86	37.037	ENSPMAG00000003743	zgc:162396	99	37.037	Petromyzon_marinus
ENSGACG00000002200	zgc:162396	96	68.635	ENSPFOG00000002666	zgc:162396	99	68.635	Poecilia_formosa
ENSGACG00000002200	zgc:162396	96	69.004	ENSPLAG00000010281	zgc:162396	99	69.004	Poecilia_latipinna
ENSGACG00000002200	zgc:162396	96	69.004	ENSPMEG00000002349	zgc:162396	99	69.004	Poecilia_mexicana
ENSGACG00000002200	zgc:162396	96	70.111	ENSPREG00000016491	zgc:162396	99	70.111	Poecilia_reticulata
ENSGACG00000002200	zgc:162396	96	72.325	ENSPNYG00000009858	zgc:162396	99	72.325	Pundamilia_nyererei
ENSGACG00000002200	zgc:162396	96	61.993	ENSPNAG00000004920	zgc:162396	100	61.993	Pygocentrus_nattereri
ENSGACG00000002200	zgc:162396	96	61.255	ENSPNAG00000026074	zgc:162396	99	61.255	Pygocentrus_nattereri
ENSGACG00000002200	zgc:162396	96	34.643	ENSSHAG00000000950	-	99	34.643	Sarcophilus_harrisii
ENSGACG00000002200	zgc:162396	96	63.100	ENSSFOG00015023495	zgc:162396	99	63.100	Scleropages_formosus
ENSGACG00000002200	zgc:162396	96	60.517	ENSSFOG00015023503	zgc:162396	99	60.517	Scleropages_formosus
ENSGACG00000002200	zgc:162396	96	74.908	ENSSMAG00000004484	zgc:162396	99	74.908	Scophthalmus_maximus
ENSGACG00000002200	zgc:162396	96	77.491	ENSSDUG00000010278	zgc:162396	99	77.491	Seriola_dumerili
ENSGACG00000002200	zgc:162396	96	76.753	ENSSLDG00000021423	zgc:162396	99	76.753	Seriola_lalandi_dorsalis
ENSGACG00000002200	zgc:162396	96	46.296	ENSSPUG00000015532	-	84	46.296	Sphenodon_punctatus
ENSGACG00000002200	zgc:162396	96	73.432	ENSSPAG00000005505	zgc:162396	99	73.432	Stegastes_partitus
ENSGACG00000002200	zgc:162396	96	47.232	ENSTGUG00000003861	-	100	47.232	Taeniopygia_guttata
ENSGACG00000002200	zgc:162396	66	43.548	ENSTGUG00000015044	-	98	43.548	Taeniopygia_guttata
ENSGACG00000002200	zgc:162396	97	59.707	ENSTRUG00000010648	-	100	59.707	Takifugu_rubripes
ENSGACG00000002200	zgc:162396	95	67.286	ENSTRUG00000007506	zgc:162396	99	67.286	Takifugu_rubripes
ENSGACG00000002200	zgc:162396	96	63.971	ENSTNIG00000001485	zgc:162396	100	63.971	Tetraodon_nigroviridis
ENSGACG00000002200	zgc:162396	96	40.221	ENSXETG00000033236	-	97	40.221	Xenopus_tropicalis
ENSGACG00000002200	zgc:162396	96	70.111	ENSXCOG00000014529	zgc:162396	99	70.111	Xiphophorus_couchianus
ENSGACG00000002200	zgc:162396	96	69.742	ENSXMAG00000023129	zgc:162396	99	69.742	Xiphophorus_maculatus