EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002266 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 12123 bases
Position: chrgroupXVI:4908425-4920547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002943	KH_1	PF00013.29	1.3e-54	1	3
ENSGACP00000002943	KH_1	PF00013.29	1.3e-54	2	3
ENSGACP00000002943	KH_1	PF00013.29	1.3e-54	3	3
ENSGACP00000002943	KH_2	PF07650.17	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002954	-	1029	-	ENSGACP00000002943	342 (aa)	-	G3NC94

Gene Model

Click here to download ENSGACG00000002266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002266	-	72	42.466	ENSGACG00000020175	nova1	53	42.466
ENSGACG00000002266	-	97	75.227	ENSGACG00000006681	PCBP2	97	75.227
ENSGACG00000002266	-	94	31.944	ENSGACG00000007581	hnrnpk	99	30.982
ENSGACG00000002266	-	91	37.838	ENSGACG00000016704	fubp3	68	37.838
ENSGACG00000002266	-	94	64.688	ENSGACG00000002664	-	70	64.688
ENSGACG00000002266	-	74	37.037	ENSGACG00000012422	KHSRP	66	37.037
ENSGACG00000002266	-	96	81.690	ENSGACG00000014955	-	97	81.690
ENSGACG00000002266	-	67	41.176	ENSGACG00000018990	khsrp	50	41.176
ENSGACG00000002266	-	98	70.088	ENSGACG00000003044	zgc:110045	98	70.088
ENSGACG00000002266	-	89	33.750	ENSGACG00000005991	igf2bp2b	64	33.750
ENSGACG00000002266	-	97	73.716	ENSGACG00000003197	pcbp2	97	73.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002266	-	97	87.952	ENSAPOG00000020003	pcbp3	87	87.952	Acanthochromis_polyacanthus
ENSGACG00000002266	-	97	92.447	ENSAPOG00000016582	-	100	88.761	Acanthochromis_polyacanthus
ENSGACG00000002266	-	98	91.343	ENSAMEG00000001697	-	91	91.343	Ailuropoda_melanoleuca
ENSGACG00000002266	-	100	87.966	ENSACIG00000002739	-	100	87.966	Amphilophus_citrinellus
ENSGACG00000002266	-	99	80.495	ENSACIG00000010933	pcbp3	98	80.495	Amphilophus_citrinellus
ENSGACG00000002266	-	96	93.709	ENSAOCG00000007806	-	100	93.709	Amphiprion_ocellaris
ENSGACG00000002266	-	96	90.606	ENSAOCG00000008592	-	98	90.606	Amphiprion_ocellaris
ENSGACG00000002266	-	97	84.463	ENSAPEG00000008011	pcbp3	96	84.463	Amphiprion_percula
ENSGACG00000002266	-	100	90.351	ENSAPEG00000005209	-	100	90.351	Amphiprion_percula
ENSGACG00000002266	-	100	90.058	ENSATEG00000009833	-	100	90.058	Anabas_testudineus
ENSGACG00000002266	-	96	82.621	ENSATEG00000015787	-	99	82.621	Anabas_testudineus
ENSGACG00000002266	-	98	90.746	ENSAPLG00000002975	-	98	90.746	Anas_platyrhynchos
ENSGACG00000002266	-	94	73.514	ENSAPLG00000008951	-	79	73.514	Anas_platyrhynchos
ENSGACG00000002266	-	99	78.453	ENSACAG00000009819	-	99	78.453	Anolis_carolinensis
ENSGACG00000002266	-	98	85.237	ENSACAG00000004607	-	99	85.237	Anolis_carolinensis
ENSGACG00000002266	-	96	87.645	ENSANAG00000030702	-	100	87.645	Aotus_nancymaae
ENSGACG00000002266	-	99	82.692	ENSACLG00000011835	pcbp3	98	82.692	Astatotilapia_calliptera
ENSGACG00000002266	-	100	91.813	ENSACLG00000003801	-	100	91.813	Astatotilapia_calliptera
ENSGACG00000002266	-	97	85.593	ENSAMXG00000003440	pcbp3	96	85.593	Astyanax_mexicanus
ENSGACG00000002266	-	94	64.368	ENSAMXG00000001760	zgc:110045	72	64.368	Astyanax_mexicanus
ENSGACG00000002266	-	96	86.280	ENSAMXG00000013588	-	99	86.280	Astyanax_mexicanus
ENSGACG00000002266	-	89	94.239	ENSCAFG00020019472	-	86	94.239	Canis_lupus_dingo
ENSGACG00000002266	-	98	90.149	ENSCSAG00000007440	-	89	90.149	Chlorocebus_sabaeus
ENSGACG00000002266	-	98	91.071	ENSCPBG00000012151	-	99	91.071	Chrysemys_picta_bellii
ENSGACG00000002266	-	95	78.797	ENSCPBG00000000733	-	73	78.797	Chrysemys_picta_bellii
ENSGACG00000002266	-	100	78.711	ENSCSEG00000016984	-	100	78.711	Cynoglossus_semilaevis
ENSGACG00000002266	-	97	86.145	ENSCSEG00000000822	pcbp3	100	86.145	Cynoglossus_semilaevis
ENSGACG00000002266	-	100	91.520	ENSCVAG00000005262	-	100	91.520	Cyprinodon_variegatus
ENSGACG00000002266	-	97	84.181	ENSCVAG00000014482	pcbp3	96	84.181	Cyprinodon_variegatus
ENSGACG00000002266	-	100	86.027	ENSDARG00000054378	pcbp3	100	86.027	Danio_rerio
ENSGACG00000002266	-	98	77.612	ENSETEG00000015988	-	98	77.612	Echinops_telfairi
ENSGACG00000002266	-	98	76.923	ENSEBUG00000007485	-	92	82.648	Eptatretus_burgeri
ENSGACG00000002266	-	85	74.336	ENSEBUG00000005495	pcbp3	68	74.336	Eptatretus_burgeri
ENSGACG00000002266	-	96	69.000	ENSEBUG00000016192	pcbp3	99	69.930	Eptatretus_burgeri
ENSGACG00000002266	-	97	84.270	ENSELUG00000003521	pcbp3	97	84.036	Esox_lucius
ENSGACG00000002266	-	97	91.239	ENSELUG00000001560	-	99	82.192	Esox_lucius
ENSGACG00000002266	-	98	89.254	ENSFALG00000003949	-	98	89.254	Ficedula_albicollis
ENSGACG00000002266	-	94	73.784	ENSFALG00000004411	-	74	73.784	Ficedula_albicollis
ENSGACG00000002266	-	100	89.474	ENSFHEG00000006539	-	100	89.474	Fundulus_heteroclitus
ENSGACG00000002266	-	96	88.110	ENSFHEG00000016615	pcbp3	95	88.110	Fundulus_heteroclitus
ENSGACG00000002266	-	96	82.934	ENSGMOG00000011992	pcbp3	97	82.934	Gadus_morhua
ENSGACG00000002266	-	95	70.659	ENSGMOG00000008611	-	99	70.659	Gadus_morhua
ENSGACG00000002266	-	97	77.746	ENSGALG00000013155	-	99	76.000	Gallus_gallus
ENSGACG00000002266	-	98	82.730	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSGACG00000002266	-	97	92.145	ENSGAFG00000010274	-	95	92.145	Gambusia_affinis
ENSGACG00000002266	-	96	80.737	ENSGAFG00000011430	pcbp3	96	80.737	Gambusia_affinis
ENSGACG00000002266	-	73	86.842	ENSGAGG00000006956	-	76	86.842	Gopherus_agassizii
ENSGACG00000002266	-	91	83.217	ENSGAGG00000000271	-	100	83.217	Gopherus_agassizii
ENSGACG00000002266	-	97	87.048	ENSHBUG00000010697	pcbp3	99	87.048	Haplochromis_burtoni
ENSGACG00000002266	-	100	91.813	ENSHBUG00000021782	-	100	91.813	Haplochromis_burtoni
ENSGACG00000002266	-	100	86.550	ENSHCOG00000006067	-	100	86.550	Hippocampus_comes
ENSGACG00000002266	-	97	84.181	ENSHCOG00000017868	pcbp3	96	84.181	Hippocampus_comes
ENSGACG00000002266	-	100	88.596	ENSIPUG00000006238	pcbp3	100	88.596	Ictalurus_punctatus
ENSGACG00000002266	-	97	84.463	ENSKMAG00000003046	pcbp3	96	84.463	Kryptolebias_marmoratus
ENSGACG00000002266	-	97	91.843	ENSKMAG00000018530	-	95	91.843	Kryptolebias_marmoratus
ENSGACG00000002266	-	100	77.233	ENSLBEG00000006542	-	100	77.233	Labrus_bergylta
ENSGACG00000002266	-	99	86.726	ENSLBEG00000006201	pcbp3	98	86.726	Labrus_bergylta
ENSGACG00000002266	-	95	78.226	ENSLACG00000010386	pcbp3	74	78.226	Latimeria_chalumnae
ENSGACG00000002266	-	95	73.585	ENSLACG00000010804	zgc:110045	74	73.585	Latimeria_chalumnae
ENSGACG00000002266	-	94	78.551	ENSLOCG00000005058	zgc:110045	79	78.551	Lepisosteus_oculatus
ENSGACG00000002266	-	98	90.774	ENSLOCG00000009369	pcbp3	99	90.774	Lepisosteus_oculatus
ENSGACG00000002266	-	100	88.889	ENSMAMG00000011620	-	100	88.889	Mastacembelus_armatus
ENSGACG00000002266	-	96	87.879	ENSMAMG00000022336	pcbp3	93	87.879	Mastacembelus_armatus
ENSGACG00000002266	-	100	85.269	ENSMZEG00005014882	-	100	85.836	Maylandia_zebra
ENSGACG00000002266	-	99	80.495	ENSMZEG00005008993	pcbp3	98	82.102	Maylandia_zebra
ENSGACG00000002266	-	94	73.784	ENSMGAG00000006794	-	74	73.784	Meleagris_gallopavo
ENSGACG00000002266	-	96	78.371	ENSMGAG00000001883	-	97	78.652	Meleagris_gallopavo
ENSGACG00000002266	-	100	89.181	ENSMMOG00000005216	-	100	89.181	Mola_mola
ENSGACG00000002266	-	96	87.048	ENSMMOG00000000730	pcbp3	88	87.048	Mola_mola
ENSGACG00000002266	-	73	78.241	ENSMODG00000027884	-	94	78.241	Monodelphis_domestica
ENSGACG00000002266	-	96	82.621	ENSMALG00000000691	pcbp3	95	82.621	Monopterus_albus
ENSGACG00000002266	-	98	84.226	ENSMPUG00000001779	-	90	84.226	Mustela_putorius_furo
ENSGACG00000002266	-	98	83.862	ENSNBRG00000016714	-	99	83.862	Neolamprologus_brichardi
ENSGACG00000002266	-	99	80.220	ENSNBRG00000016409	-	98	80.220	Neolamprologus_brichardi
ENSGACG00000002266	-	95	81.948	ENSOPRG00000003431	-	99	81.948	Ochotona_princeps
ENSGACG00000002266	-	100	91.813	ENSONIG00000004611	-	100	91.813	Oreochromis_niloticus
ENSGACG00000002266	-	97	83.799	ENSONIG00000012122	-	98	83.799	Oreochromis_niloticus
ENSGACG00000002266	-	98	89.254	ENSOCUG00000002696	-	89	89.254	Oryctolagus_cuniculus
ENSGACG00000002266	-	100	91.813	ENSORLG00000022739	-	100	91.813	Oryzias_latipes
ENSGACG00000002266	-	96	90.854	ENSORLG00000000059	pcbp3	99	90.854	Oryzias_latipes
ENSGACG00000002266	-	100	91.520	ENSORLG00020006124	-	100	91.520	Oryzias_latipes_hni
ENSGACG00000002266	-	96	90.854	ENSORLG00020012671	pcbp3	97	90.854	Oryzias_latipes_hni
ENSGACG00000002266	-	96	90.854	ENSORLG00015000429	pcbp3	97	90.854	Oryzias_latipes_hsok
ENSGACG00000002266	-	99	90.323	ENSORLG00015008051	-	98	90.323	Oryzias_latipes_hsok
ENSGACG00000002266	-	92	89.298	ENSOMEG00000020811	pcbp3	97	89.298	Oryzias_melastigma
ENSGACG00000002266	-	100	91.228	ENSOMEG00000020162	-	100	91.228	Oryzias_melastigma
ENSGACG00000002266	-	98	83.060	ENSOGAG00000008044	-	99	83.060	Otolemur_garnettii
ENSGACG00000002266	-	75	84.737	ENSPKIG00000020913	-	82	84.737	Paramormyrops_kingsleyae
ENSGACG00000002266	-	100	88.889	ENSPKIG00000019329	pcbp3	100	88.889	Paramormyrops_kingsleyae
ENSGACG00000002266	-	98	81.416	ENSPSIG00000014970	-	98	82.006	Pelodiscus_sinensis
ENSGACG00000002266	-	91	75.379	ENSPSIG00000008350	-	67	75.379	Pelodiscus_sinensis
ENSGACG00000002266	-	96	84.615	ENSPMGG00000022383	pcbp3	95	84.615	Periophthalmus_magnuspinnatus
ENSGACG00000002266	-	77	88.298	ENSPMAG00000004637	-	97	88.298	Petromyzon_marinus
ENSGACG00000002266	-	94	71.605	ENSPMAG00000004551	pcbp3	91	69.940	Petromyzon_marinus
ENSGACG00000002266	-	98	84.078	ENSPCIG00000028092	-	96	91.244	Phascolarctos_cinereus
ENSGACG00000002266	-	96	81.972	ENSPLAG00000011449	pcbp3	88	81.972	Poecilia_latipinna
ENSGACG00000002266	-	99	91.420	ENSPLAG00000004074	-	92	91.420	Poecilia_latipinna
ENSGACG00000002266	-	96	84.181	ENSPMEG00000021239	pcbp3	95	84.181	Poecilia_mexicana
ENSGACG00000002266	-	99	88.034	ENSPMEG00000006653	-	99	88.319	Poecilia_mexicana
ENSGACG00000002266	-	100	89.181	ENSPREG00000020585	-	94	98.565	Poecilia_reticulata
ENSGACG00000002266	-	96	86.145	ENSPREG00000015736	pcbp3	99	86.145	Poecilia_reticulata
ENSGACG00000002266	-	97	87.349	ENSPNYG00000012326	pcbp3	96	87.349	Pundamilia_nyererei
ENSGACG00000002266	-	100	89.474	ENSPNYG00000013205	-	100	89.474	Pundamilia_nyererei
ENSGACG00000002266	-	96	86.322	ENSPNAG00000008541	-	99	86.322	Pygocentrus_nattereri
ENSGACG00000002266	-	100	91.520	ENSPNAG00000015104	pcbp3	100	91.520	Pygocentrus_nattereri
ENSGACG00000002266	-	98	89.851	ENSRNOG00000001245	Pcbp3	98	89.851	Rattus_norvegicus
ENSGACG00000002266	-	98	79.539	ENSRBIG00000028177	-	99	75.202	Rhinopithecus_bieti
ENSGACG00000002266	-	98	90.179	ENSSHAG00000007890	-	99	90.179	Sarcophilus_harrisii
ENSGACG00000002266	-	97	91.541	ENSSFOG00015010205	pcbp3	95	91.541	Scleropages_formosus
ENSGACG00000002266	-	94	80.124	ENSSFOG00015007118	-	93	80.124	Scleropages_formosus
ENSGACG00000002266	-	97	83.616	ENSSFOG00015014706	pcbp3	96	83.616	Scleropages_formosus
ENSGACG00000002266	-	96	88.182	ENSSMAG00000011929	pcbp3	98	88.182	Scophthalmus_maximus
ENSGACG00000002266	-	100	91.520	ENSSMAG00000003135	-	100	91.520	Scophthalmus_maximus
ENSGACG00000002266	-	97	86.228	ENSSDUG00000008502	-	98	83.489	Seriola_dumerili
ENSGACG00000002266	-	96	82.153	ENSSDUG00000011608	pcbp3	99	82.153	Seriola_dumerili
ENSGACG00000002266	-	97	92.447	ENSSLDG00000020161	-	95	92.447	Seriola_lalandi_dorsalis
ENSGACG00000002266	-	96	82.153	ENSSLDG00000008518	pcbp3	99	82.153	Seriola_lalandi_dorsalis
ENSGACG00000002266	-	92	76.547	ENSSPUG00000013214	-	88	85.128	Sphenodon_punctatus
ENSGACG00000002266	-	97	71.751	ENSSPAG00000023341	-	95	71.751	Stegastes_partitus
ENSGACG00000002266	-	96	93.377	ENSSPAG00000004190	-	100	93.377	Stegastes_partitus
ENSGACG00000002266	-	98	87.500	ENSTGUG00000003316	-	99	87.500	Taeniopygia_guttata
ENSGACG00000002266	-	98	83.881	ENSTGUG00000008158	-	99	83.881	Taeniopygia_guttata
ENSGACG00000002266	-	97	85.174	ENSTRUG00000013604	pcbp3	86	97.949	Takifugu_rubripes
ENSGACG00000002266	-	96	91.586	ENSTRUG00000006280	-	92	91.586	Takifugu_rubripes
ENSGACG00000002266	-	98	83.844	ENSTTRG00000015075	-	99	83.844	Tursiops_truncatus
ENSGACG00000002266	-	90	73.446	ENSXETG00000010491	pcbp2	74	73.446	Xenopus_tropicalis
ENSGACG00000002266	-	98	89.286	ENSXETG00000011483	pcbp1	99	89.286	Xenopus_tropicalis
ENSGACG00000002266	-	96	84.181	ENSXCOG00000020481	pcbp3	95	84.181	Xiphophorus_couchianus
ENSGACG00000002266	-	97	84.463	ENSXMAG00000008175	pcbp3	96	84.463	Xiphophorus_maculatus
ENSGACG00000002266	-	97	92.145	ENSXMAG00000028711	-	95	92.145	Xiphophorus_maculatus